prot_Ecto-sp13_S_contig15401.4046.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15401.4046.1
Unique Nameprot_Ecto-sp13_S_contig15401.4046.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: D8LLC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC6_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 4.840e-138
Identity = 287/306 (93.79%), Postives = 290/306 (94.77%), Query Frame = 0
Query:    1 MECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXXTFTGSTDSIRXXXXXXXXXXSSGSARMLARAGLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--GASEVREDGLEGGAWEPLRTARLFLSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGGGSLGVRLVRTASVILPSTFYGMHWKWAHALTTWEDHVTEAGAENSMTVKRFTFRCVNSYSRLFYLGFWQR 304
            +ECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXX          XXXXXXXXXXSSGSA+M AR GLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GASEVREDGLEGGAWEPLRTARLFLSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGGGS GVRLVRTASVILPSTFYGMHWKWAHALTTWEDHVTEAGAENSMTVKRFTFRCVNSY+RLFYLGFWQR
Sbjct:  345 VECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXXXXX---XXXXXXXXXXXXXXSSGSAKMHARVGLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASEVREDGLEGGAWEPLRTARLFLSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGGGSFGVRLVRTASVILPSTFYGMHWKWAHALTTWEDHVTEAGAENSMTVKRFTFRCVNSYARLFYLGFWQR 647          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: A0A6H5JXQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ8_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 2.870e-134
Identity = 272/305 (89.18%), Postives = 274/305 (89.84%), Query Frame = 0
Query:    1 MECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXXTFTGSTDSIRXXXXXXXXXXSS-GSARMLARAGLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGASEVREDGLEGGAWEPLRTARLFLSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGGGSLGVRLVRTASVILPSTFYGMHWKWAHALTTWEDHVTEAGAENSMTVKRFTFRCVNSYSRLFYLGFWQR 304
            MECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXX          XXXXXXXXXX   GSARMLARAGLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AS VREDGLEGGAWEPLRTARLF+SWSLEAVLLYLAIRMMLWFAWLEVRSLEKFG GSLG RLVRTASVILPSTFY MHWKWAHALT+WEDHVTEA AENSMTVKRFTFRCVNSYSRLFYLGFWQR
Sbjct:  108 MECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERAKFMVGWKRPGRAGMTPEGALQRQTSFSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSARMLARAGLRRQCATGCFRATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------ASGVREDGLEGGAWEPLRTARLFVSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGEGSLGFRLVRTASVILPSTFYDMHWKWAHALTSWEDHVTEASAENSMTVKRFTFRCVNSYSRLFYLGFWQR 399          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: A0A485LLE1_9STRA (Aste57867_21126 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLE1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.910e-5
Identity = 24/44 (54.55%), Postives = 38/44 (86.36%), Query Frame = 0
Query:    9 MAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGV--HKEDTIERA 50
            +AP++ LF+AVWA+LFLV W+RR+S+LA+RWGV  +++D  ++A
Sbjct:  365 LAPFYALFMAVWASLFLVAWKRRASSLAYRWGVLGYEDDDHDQA 408          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: A0A1V9ZXU1_9STRA (Anoctamin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXU1_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 3.800e-5
Identity = 23/46 (50.00%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    9 MAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGV--HKEDTIERAKF 52
            MAP++ LF+A+WA+ FLV W+RR++TLA+RWGV  ++++ + R +F
Sbjct:  310 MAPFYALFMALWASAFLVAWKRRANTLAYRWGVLGYEDEEVLRPEF 355          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: A0A397A8H4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A8H4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.070e-5
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    9 MAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGV---HKEDTIERAKFMVG------WKR 58
            +AP + LF+A+WA+LFLV W+RR+++LA+RWGV    ++D + R  F         WKR
Sbjct:  110 LAPVYALFMAIWASLFLVAWRRRANSLAYRWGVLGYEEDDEVLRLAFRTSATSGLTWKR 168          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: W4H3T2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3T2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.640e-5
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    9 MAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGV---HKEDTIERAKFMVG------WKR 58
            +AP + LF+A+WA+LFLV W+RR+++LA+RWGV    ++D + R  F         WKR
Sbjct:  371 LAPVYALFMAIWASLFLVAWRRRANSLAYRWGVLGYEEDDEVLRPAFRTSATSGLTWKR 429          
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Match: A0A397AY73_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AY73_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 6.670e-5
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    9 MAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGV---HKEDTIERAKFMVG------WKR 58
            +AP + LF+A+WA+LFLV W+RR+++LA+RWGV    ++D + R  F         WKR
Sbjct:  277 LAPVYALFMAIWASLFLVAWRRRANSLAYRWGVLGYEEDDEVLRPAFRTSATSGLTWKR 335          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15401.4046.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LLC6_ECTSI4.840e-13893.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXQ8_9PHAE2.870e-13489.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485LLE1_9STRA2.910e-554.55Aste57867_21126 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZXU1_9STRA3.800e-550.00Anoctamin n=1 Tax=Thraustotheca clavata TaxID=7455... [more]
A0A397A8H4_9STRA6.070e-544.07Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4H3T2_9STRA6.640e-544.07Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A397AY73_9STRA6.670e-544.07Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007632AnoctaminPFAMPF04547Anoctamincoord: 9..63
e-value: 8.7E-10
score: 38.0
coord: 198..303
e-value: 1.4E-12
score: 47.2
IPR007632AnoctaminPANTHERPTHR12308NGEP-RELATEDcoord: 196..302
coord: 9..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..28
NoneNo IPR availableTMHMMTMhelixcoord: 201..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15401contigEcto-sp13_S_contig15401:4..3758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15401.4046.1mRNA_Ecto-sp13_S_contig15401.4046.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15401 4..3758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15401.4046.1 ID=prot_Ecto-sp13_S_contig15401.4046.1|Name=mRNA_Ecto-sp13_S_contig15401.4046.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MECEPPTSMAPYFNLFLAVWATLFLVLWQRRSSTLAFRWGVHKEDTIERA
KFMVGWKRPGRAGMTPEGALQRQTSFSSSSSTSTSTATTFTGSTDSIRST
DSVRSSSSSSGSARMLARAGLRRQCATGCFRATAAAAATDRAAAAAAAAA
AAPASKRSWSGAVGRGGGGGGGGRGSGGASEVREDGLEGGAWEPLRTARL
FLSWSLEAVLLYLAIRMMLWFAWLEVRSLEKFGGGSLGVRLVRTASVILP
STFYGMHWKWAHALTTWEDHVTEAGAENSMTVKRFTFRCVNSYSRLFYLG
FWQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007632Anoctamin