prot_Ecto-sp13_S_contig154.4043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig154.4043.1
Unique Nameprot_Ecto-sp13_S_contig154.4043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length389
Homology
BLAST of mRNA_Ecto-sp13_S_contig154.4043.1 vs. uniprot
Match: D8LCB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 2.250e-54
Identity = 129/362 (35.64%), Postives = 191/362 (52.76%), Query Frame = 0
Query:    1 MCTENICSTFIWRGPGYPEHDTGGLCSCVCEDGTWSNWNILGRASCVPVVVHTIFGGAGLTVSVAVLFHAIYHLHRQQTYFHAQCTSASTSAIERCRWQLHTTTVTVATVNICYFSLVL---ADVLRWSVVVIVVNGIPQFIGSVILSSRMWMYTLSNRHEINTLARANDPRLTRESPEIIALSAWLERPRGYITACCTMSFAPGVATVLALAKYTESAVRFIALGGVIVGTIILAVFWVC--GRSLMRAIDTSLQ--LQTSFPSTGKVEGQNGGRGYRTLLEAKRKVRRIMTVTAGLLVPAIAVVAMAIFTPYGIQAPLLMFCVPFGFVPQIWLSMNIQLHAKRSRLRQGHTGTPISAWAS 355
            MC ++ C T +W G G       G C C C + TWS +NI+G  SCVP   H +FG  G+ ++   L H+ Y L+RQ  + H Q  +AS S++E+CR  LH   +  A + +CYF +VL   ++ L  S + ++  G        IL+ RMW+Y              NDPRLTRE+PEI+A+S  LERP G   +   M   P +ATVLA+AK  ++A +  A+    +G I+   F +   G +L+R ++  L+  ++ S  S   V G  G      LL+A RK  +       ++    A + + +FT YG  APL+ F +P+GF P +W   N+QLHA RSR R   T T + + AS
Sbjct:    1 MCGQD-CQTILWGGTGISTVGADGACRCACGNETWSEYNIVGLPSCVPSKAHVVFGTVGVLMATTSLCHSAYQLYRQVKH-HRQVITASISSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMLSAGQTMMTIGGILTVRMWIY-------------CNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVA--FLGLIVFCDFIILKSGTALLRTVNKYLRNTVERSERSNSIVAGTVGS---LPLLKAARKNIKFALYFCLVVSLLTAFLMICLFTTYGATAPLIFFGIPYGFSPPVWFVFNVQLHAGRSRSR---TSTDVVSGAS 339          
BLAST of mRNA_Ecto-sp13_S_contig154.4043.1 vs. uniprot
Match: A0A6H5KM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.410e-52
Identity = 149/422 (35.31%), Postives = 207/422 (49.05%), Query Frame = 0
Query:    1 MCTENICSTFIWRGPGYPEHDTGGLCSCVCEDGTWSNWNILGRASCVPVVVHTIFGGAGLTVSVAVLFHAIYHLHRQQTYFHAQCTSASTSAIERCRWQLHTTTVTVATVNICYFSLVLA-DVLRWSVVVIVVNGIPQFIGSV--ILSSRMWMYTLSN------------------RHEINTLARANDPRLTRESPEIIALSAWLERPRGYITACCTMSFAPGVATVLALAKYTESA--VRFIALGGVIVGTIILAVFWVCGRSLMRAIDTSLQLQTSFPSTGKVEGQN------GGRGYRTLLEAKRKVRRI---MTVTAGLLVPAIAVVAMAIFTPYGIQAPLLMFCVPFGFVPQIWLSMNIQLHAKRSRLRQGHTGTPISAWASGPLSRPAPSRLLNSLPRP------HEGRIVPTNDP 384
            MC ++ C T +W G G       G C C C D TWS +NILG  SCVP   H +FG  G+ V++  L HA Y L+RQ  Y H Q  +ASTS++E+CR  LH   +  A + +CYF +VL  D  R  +  I + GI Q + ++  IL+ RMW+Y L++                  R+ I  LA +NDPRL RE+PE++ +S  LERP G   +   M   P VATVLA AK  ++A  V  +A  G+IV          C   +++     LQ    +     V  +       G  G   LL+A RK  +      V   LL    ++V + +FT YG  APL+   +P+G  P +W   NIQLHA RSR R   T   + + AS  + R  PS     + R       +E  +VPT  P
Sbjct:    1 MCGQD-CQTSLWGGTGISTVGADGGCRCACGDETWSEYNILGLPSCVPSKAHAVFGAVGVFVTMTSLGHAAYQLYRQVKY-HRQFMAASTSSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMFGIGQIMMTIGGILTVRMWLYCLTSDEQRSPLQLNRFPYVSPLRNHILFLA-SNDPRLIRETPELLMISEALERPTGLFVSNTVMCVGPAVATVLAAAKSLQAACMVSAVAFLGLIV---------FCDFIILKTATALLQTVNKYLRNSVVRSEKSNSIMAGTVGSLQLLKAARKNIKFALYFCVVVSLL--TFSIVMIGLFTTYGATAPLIFSGIPYGCSPPVWFVFNIQLHAGRSRNR---TEPDVVSRASSVI-RQVPSVATRIVSRAKGVVFGNERSVVPTLTP 404          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig154.4043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCB1_ECTSI2.250e-5435.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM92_9PHAE1.410e-5235.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 308..312
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..332
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 333..388
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..283
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 313..332
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 215..237
NoneNo IPR availableTMHMMTMhelixcoord: 188..210
NoneNo IPR availableTMHMMTMhelixcoord: 287..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig154contigEcto-sp13_S_contig154:22776..25401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig154.4043.1mRNA_Ecto-sp13_S_contig154.4043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig154 22776..25401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig154.4043.1 ID=prot_Ecto-sp13_S_contig154.4043.1|Name=mRNA_Ecto-sp13_S_contig154.4043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=389bp
MCTENICSTFIWRGPGYPEHDTGGLCSCVCEDGTWSNWNILGRASCVPVV
VHTIFGGAGLTVSVAVLFHAIYHLHRQQTYFHAQCTSASTSAIERCRWQL
HTTTVTVATVNICYFSLVLADVLRWSVVVIVVNGIPQFIGSVILSSRMWM
YTLSNRHEINTLARANDPRLTRESPEIIALSAWLERPRGYITACCTMSFA
PGVATVLALAKYTESAVRFIALGGVIVGTIILAVFWVCGRSLMRAIDTSL
QLQTSFPSTGKVEGQNGGRGYRTLLEAKRKVRRIMTVTAGLLVPAIAVVA
MAIFTPYGIQAPLLMFCVPFGFVPQIWLSMNIQLHAKRSRLRQGHTGTPI
SAWASGPLSRPAPSRLLNSLPRPHEGRIVPTNDPLSVP*
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