prot_Ecto-sp13_S_contig15391.4038.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15391.4038.1
Unique Name	prot_Ecto-sp13_S_contig15391.4038.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	86

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A6H5L116_9PHAE (ATP_bind_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L116_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 2.480e-53
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR
Sbjct:    7 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 92

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: D7FR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR81_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.020e-48
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR
Sbjct:  893 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 978

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: I2CPH6_NANGC (Pp-loop domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH6_NANGC)

HSP 1 Score: 144 bits (362), Expect = 2.560e-40
Identity = 68/86 (79.07%), Postives = 76/86 (88.37%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RLCLGLSGGKDS+TLLHVLLHLQK+API F VACATVDPQT SFDPSPLIPY++ LGV  HY+S PII QAK  +QGDSLC+FC+R
Sbjct:   35 RLCLGLSGGKDSLTLLHVLLHLQKKAPIRFSVACATVDPQTSSFDPSPLIPYMKALGVPYHYLSHPIIAQAKAQLQGDSLCSFCSR 120

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A812RBY0_SYMMI (TtcA protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RBY0_SYMMI)

HSP 1 Score: 141 bits (356), Expect = 4.730e-38
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RL LGLSGGKDS+TLLH+LLHLQ++AP+ F +ACATVDPQT SFDPSPLIPY++ LGV  HY+S PI+E AK+ MQGDSLCAFCAR
Sbjct:  353 RLLLGLSGGKDSLTLLHILLHLQRKAPVNFTIACATVDPQTESFDPSPLIPYMQSLGVTYHYLSEPIVELAKSKMQGDSLCAFCAR 438

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A7S3XUF4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUF4_HETAK)

HSP 1 Score: 135 bits (339), Expect = 3.610e-37
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RLCLGLSGGKDS+ LLHVLL LQ++API FE+ACATVDP T SFDP PLIPYL  LGV  HY+  PIIE+AKT++QGDS+C+FC+R
Sbjct:   86 RLCLGLSGGKDSLALLHVLLALQRKAPIRFELACATVDPMTASFDPRPLIPYLASLGVTYHYLEEPIIERAKTALQGDSICSFCSR 171

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A4R3K081_9PROT (tRNA 2-thiocytidine biosynthesis protein TtcA n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A4R3K081_9PROT)

HSP 1 Score: 129 bits (324), Expect = 2.030e-35
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            R+ LGLSGGKDS++LLHVLLHLQK+API FE+A  TVDPQ+P FDPSPL PYLE+LGV+  Y S PI+EQA+  MQGDS CA+C+R
Sbjct:   33 RVLLGLSGGKDSLSLLHVLLHLQKKAPIKFELAACTVDPQSPDFDPSPLKPYLEQLGVRYFYDSQPIVEQAQAHMQGDSFCAYCSR 118

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A7S3MGR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGR1_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.130e-35
Identity = 62/86 (72.09%), Postives = 75/86 (87.21%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RL LGLSGGKDS+ LLH+LL +QKRAP+ FE+ACATVDPQT SFDPSPLIPY++ LG+  HY+S PI+E AK+ +QGDSLCAFC+R
Sbjct:  859 RLLLGLSGGKDSLALLHILLAVQKRAPVKFEIACATVDPQTDSFDPSPLIPYVQSLGITYHYLSEPIVELAKSKLQGDSLCAFCSR 944

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A6F8V971_9PROT (ATP_bind_3 domain-containing protein n=2 Tax=Nitrosomonadales TaxID=32003 RepID=A0A6F8V971_9PROT)

HSP 1 Score: 124 bits (312), Expect = 1.200e-33
Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            ++ LGLSGGKDS++LL VLLHLQK+API FE+A  TVDPQ+P FDPSPL  YL  LGV   Y S PI+EQAKTSMQGDS CAFC+R
Sbjct:   31 KVLLGLSGGKDSLSLLQVLLHLQKKAPIRFELAACTVDPQSPDFDPSPLKAYLAELGVPYFYESQPIVEQAKTSMQGDSFCAFCSR 116

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A258TUJ9_9PROT (tRNA 2-thiocytidine(32) synthetase TtcA n=1 Tax=Hydrogenophilales bacterium 28-61-23 TaxID=1970530 RepID=A0A258TUJ9_9PROT)

HSP 1 Score: 123 bits (308), Expect = 3.380e-33
Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            R+ LGLSGGKDS++LLH+LLHLQK+API FE+AC TVDPQ+P FDPSPL  YL  LGV   Y S PI+EQA++ M+GDS CA+C+R
Sbjct:    7 RVLLGLSGGKDSLSLLHILLHLQKKAPIKFELACCTVDPQSPEFDPSPLKAYLADLGVPYFYESQPILEQAESHMKGDSFCAYCSR 92

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BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Match: A0A7S2RBR9_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RBR9_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.150e-33
Identity = 61/86 (70.93%), Postives = 72/86 (83.72%), Query Frame = 0

Query:    1 RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLIPYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR 86
            RL LGLSGGKDS+TLLH+LLH QKRAPI FEV+  T+DP   SFDPS LIPY++ LGV+ H++ +PI EQAKTSMQG S+CAFCAR
Sbjct:  764 RLLLGLSGGKDSLTLLHLLLHFQKRAPIKFEVSACTIDPLIESFDPSSLIPYMKSLGVEYHFVQTPIFEQAKTSMQGSSICAFCAR 849

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15391.4038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L116_9PHAE	2.480e-53	100.00	ATP_bind_3 domain-containing protein n=1 Tax=Ectoc...	[more]
D7FR81_ECTSI	1.020e-48	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
I2CPH6_NANGC	2.560e-40	79.07	Pp-loop domain protein (Fragment) n=1 Tax=Nannochl...	[more]
A0A812RBY0_SYMMI	4.730e-38	75.58	TtcA protein (Fragment) n=1 Tax=Symbiodinium micro...	[more]
A0A7S3XUF4_HETAK	3.610e-37	73.26	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A4R3K081_9PROT	2.030e-35	70.93	tRNA 2-thiocytidine biosynthesis protein TtcA n=2 ...	[more]
A0A7S3MGR1_9STRA	3.130e-35	72.09	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A6F8V971_9PROT	1.200e-33	70.93	ATP_bind_3 domain-containing protein n=2 Tax=Nitro...	[more]
A0A258TUJ9_9PROT	3.380e-33	67.44	tRNA 2-thiocytidine(32) synthetase TtcA n=1 Tax=Hy...	[more]
A0A7S2RBR9_9STRA	6.150e-33	70.93	Hypothetical protein n=1 Tax=labyrinthulid quahog ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..86 e-value: 2.4E-11 score: 45.8
IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	PFAM	PF01171	ATP_bind_3	coord: 2..38 e-value: 2.5E-5 score: 24.1
None	No IPR available	PANTHER	PTHR43686	FAMILY NOT NAMED	coord: 2..86
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 1..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15391	contig	Ecto-sp13_S_contig15391:2..771 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15391.4038.1	mRNA_Ecto-sp13_S_contig15391.4038.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15391 2..771 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15391.4038.1 ID=prot_Ecto-sp13_S_contig15391.4038.1|Name=mRNA_Ecto-sp13_S_contig15391.4038.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
RLCLGLSGGKDSMTLLHVLLHLQKRAPITFEVACATVDPQTPSFDPSPLI
PYLERLGVKLHYISSPIIEQAKTSMQGDSLCAFCAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR011063	TilS/TtcA_N