mRNA_Ecto-sp13_S_contig15380.4035.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: D7FZA8_ECTSI (Ascorbate peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA8_ECTSI) HSP 1 Score: 269 bits (687), Expect = 9.720e-89 Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 1
Query: 25 MKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQ 414
MKMCAADDDNPILIRLAWHDAGTFNKDS EPWPR GGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQ
Sbjct: 1 MKMCAADDDNPILIRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQ 130
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: D7G168_ECTSI (L-ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI) HSP 1 Score: 206 bits (523), Expect = 6.420e-63 Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQ 414
L+ CK E+ M + +PI+IRLAWHDAGT+NKDS E WPR GGANGSIRFEPEINH AN GL LKLL P+K K+ EVGWADL+QLASATAVE AGGP IDM+YGRKDA P+DCVDEG+LPAG+ PFPDAD Q
Sbjct: 96 LQECKKELAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRQGGANGSIRFEPEINHGANAGLTTALKLLTPIKKKFEEVGWADLMQLASATAVEVAGGPAIDMKYGRKDAVAPEDCVDEGSLPAGNKPFPDADNAQ 233
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: D7G488_ECTSI (Ascorbate peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G488_ECTSI) HSP 1 Score: 191 bits (486), Expect = 8.090e-59 Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 1
Query: 91 TFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQV 417
TFNKDS EPWPR GGANGSIRFEPEINH AN GLV L+LLQP+KDK+PEVGWADLIQLASA A+E+AGGPVIDM+YGRKDA TP+ CVDEG+LPAG+APFPDADTPQ
Sbjct: 5 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQA 113
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: A0A835ZE60_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE60_9STRA) HSP 1 Score: 179 bits (453), Expect = 6.520e-53 Identity = 87/134 (64.93%), Postives = 103/134 (76.87%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKD-SVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPD 399
L + ++K+ + + PI++RLAWHD+GT+NKD V WPR GGANGSIRFEPEINH AN GLV GLKLL+P+ K+P VGWADL+QLASATAVE AGGP IDMRYGRK +P+ C DEG LPA APFPD
Sbjct: 51 LLEAREALVKLIDSTNCAPIMVRLAWHDSGTYNKDIPVSEWPRCGGANGSIRFEPEINHGANAGLVNGLKLLEPIHKKHPNVGWADLLQLASATAVEVAGGPKIDMRYGRKTVESPEGCADEGYLPAAAAPFPD 184
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: A0A835YUS3_9STRA (Heme peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS3_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.730e-51 Identity = 79/129 (61.24%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 13 KAEVMKMCAADDDNPILIRLAWHDAGTFNKD-SVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFP 396
+ E+ + + P+L+RLAWHD+GT++K +E WP+ GGANGSIRF PEINH+AN GLV GL+LL+PLKDK+P + WADLIQ+ASATA+E+AGGP IDMRYGRKD ++ +C EGNLPAG P+P
Sbjct: 14 REEIKTLLDKTNSAPLLVRLAWHDSGTYDKSIRIEEWPKCGGANGSIRFVPEINHKANSGLVHGLELLKPLKDKHPSISWADLIQMASATAIEQAGGPKIDMRYGRKDVSSAAECAPEGNLPAGAKPWP 142
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: UPI00053ADFF4 (L-ascorbate peroxidase T, chloroplastic-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053ADFF4) HSP 1 Score: 161 bits (407), Expect = 8.140e-47 Identity = 74/132 (56.06%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFP 396
L++ K ++ + +PIL+RL WHDAGT+NK ++E WP+ GGANGS+RFEPE+ H AN GL+ LKL+QP+KDKYP + +ADL QLASAT VEEAGGP I M+YGR D P+ C +EG LP P P
Sbjct: 86 LKSAKEDIKVLLRTKFCHPILVRLGWHDAGTYNK-NIEEWPQRGGANGSLRFEPELKHAANAGLISALKLIQPIKDKYPNISYADLFQLASATGVEEAGGPEIPMKYGRVDVVAPEQCPEEGRLPDAGPPSP 216
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: A0A4S8IQT7_MUSBA (L-ascorbate peroxidase n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8IQT7_MUSBA) HSP 1 Score: 160 bits (406), Expect = 1.030e-46 Identity = 78/132 (59.09%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFP 396
LR+ + ++ ++ +PIL+RL WHDAGT+NK S+E WPR GGANGS+RF+ E+ H AN GLV LKLLQP+KDK+ V +ADL QLASATAVEEAGGP I M+YGR DA+ P+ C +EG LPA P P
Sbjct: 41 LRSARDDIRELLKTTFCHPILVRLGWHDAGTYNK-SIEEWPRQGGANGSVRFDKELKHAANAGLVNALKLLQPVKDKFSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDASGPEQCPEEGRLPAAGTPSP 171
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: A0A7S1P6M8_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P6M8_9ALVE) HSP 1 Score: 167 bits (422), Expect = 1.410e-46 Identity = 85/140 (60.71%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFN-KDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFP-DADTPQ 414
L+ C+ + KM + +PILIRLAWHD+GT++ K + WP GGANGSIRFEPEINH AN GL L LL+P+K +PE+ WADL+Q+ASATA+E AGGP I MRYGR DA PK+C EGNLPAG AP+P A TPQ
Sbjct: 260 LQECQEVLKKMVDEVNCHPILIRLAWHDSGTYDAKMPMTDWPNCGGANGSIRFEPEINHGANAGLQNALNLLKPIKASFPEISWADLMQMASATAIEVAGGPKIPMRYGRLDAWAPKNCPKEGNLPAGGAPWPGSASTPQ 399
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: A0A6S9GC78_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GC78_HETAK) HSP 1 Score: 162 bits (410), Expect = 1.750e-46 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDA-DTPQ 414
L+ CK + M + NPI+IRLAWHD+GT + S++ WP+ GGA GSIRF+PEI H AN GL LKLL+P+K K+P VGWADL+Q+ASA +VE AGGP I M+YGR DA P+DC EGNLP APF D TPQ
Sbjct: 49 LKECKESLKDMIDRTNSNPIMIRLAWHDSGTHDA-SIKEWPQCGGAIGSIRFDPEITHGANAGLTTALKLLEPIKAKHPSVGWADLMQMASAVSVELAGGPTIPMKYGRVDAQGPEDCSPEGNLPGAAAPFDDGCATPQ 186
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Match: X6NCD2_RETFI (PEROXIDASE_4 domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NCD2_RETFI) HSP 1 Score: 158 bits (399), Expect = 2.820e-46 Identity = 73/134 (54.48%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 1 LRACKAEVMKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDA 402
L+ C+ E+ K ++ NPIL+RLAWHD+GT+++ ++ WP GGANGSIRF+ E+ H AN GL + L+P K KY +V WADLIQLAS A+E AGGPVI +R+GR D A K+C EGNLPA + PFPD+
Sbjct: 44 LKECRDELWKFIDKENCNPILVRLAWHDSGTYDR-TIRSWPTCGGANGSIRFDTELKHGANAGLAKAVNYLKPFKQKYKDVSWADLIQLASVIAIEHAGGPVIPIRFGRVDTAEEKECPKEGNLPAANPPFPDS 176 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15380.4035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15380.4035.1 >prot_Ecto-sp13_S_contig15380.4035.1 ID=prot_Ecto-sp13_S_contig15380.4035.1|Name=mRNA_Ecto-sp13_S_contig15380.4035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=133bp MKMCAADDDNPILIRLAWHDAGTFNKDSVEPWPRFGGANGSIRFEPEINHback to top mRNA from alignment at Ecto-sp13_S_contig15380:449..2147+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15380.4035.1 ID=mRNA_Ecto-sp13_S_contig15380.4035.1|Name=mRNA_Ecto-sp13_S_contig15380.4035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15380:449..2147+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15380:449..2147+ >mRNA_Ecto-sp13_S_contig15380.4035.1 ID=mRNA_Ecto-sp13_S_contig15380.4035.1|Name=mRNA_Ecto-sp13_S_contig15380.4035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15380:449..2147+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |