prot_Ecto-sp13_S_contig1538.4033.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1538.4033.1
Unique Name	prot_Ecto-sp13_S_contig1538.4033.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	653

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1538.4033.1 vs. uniprot
Match: A0A6H5KJ77_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ77_9PHAE)

HSP 1 Score: 807 bits (2085), Expect = 9.350e-274
Identity = 422/492 (85.77%), Postives = 432/492 (87.80%), Query Frame = 0

Query:  172 MGGKKDEALGEVFIPIASFKEPKAKRTKLEMKIAPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPRGRSPPGTPVREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRCSLDLADEFTCAWPALLLRHGAPSSGFGGEADEEGGERGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGGDCPRDKDGWTYGTDGSFS------SLLADRTSGVS---KEQKGTAVRCRRWVRPLQRTGVVASTPALPPRTGAAAAAGAVEGEEVAATVEIPDGLKPFCRPELDGRVVALVHENQ--RYQPGAGWGSTDEDHLLPEDRAPLTGASGIHAIDDLDDIDPSSLGGPPPGYRWEDEDPNHDDAFADGWNSGPWTYAESFGSLPPELKLTAATGLPP 652
            MGGKKDEALGEVFIPIASFKEPKAKRTKLEMKIAPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPRG      PVREPPDLGTLCVSMSVIE ELPDTSTYRGRGVPPGGVK+RCSLDLADEFTCAWPALLLRHGAPSSG GG+ADEEGGERGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQA        +   +   G   PR    W     G+        +  + R S ++   KEQK TAVRCRRWVRPLQRTG+VASTPALPPRTGAAAAAGAV GEE AATVEIPDGLKPFCRPELDGRVVALVHENQ  RYQPGAGWGSTDEDHLLPEDRAPLTGASGIHAIDDLDDIDPSSLGGPPPGYRWEDEDPNHDD FADGWNSGPWTYAESF SLP ELKLTAAT  PP
Sbjct:    1 MGGKKDEALGEVFIPIASFKEPKAKRTKLEMKIAPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPRGXXXXXXPVREPPDLGTLCVSMSVIEAELPDTSTYRGRGVPPGGVKVRCSLDLADEFTCAWPALLLRHGAPSSGSGGDADEEGGERGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQARGRELGDLNGQRFRQGGHGAPRLGPSWAATAPGTRMVGRTALTAASRRFSPIAHRDKEQKRTAVRCRRWVRPLQRTGIVASTPALPPRTGAAAAAGAVGGEEFAATVEIPDGLKPFCRPELDGRVVALVHENQARRYQPGAGWGSTDEDHLLPEDRAPLTGASGIHAIDDLDDIDPSSLGGPPPGYRWEDEDPNHDDTFADGWNSGPWTYAESFESLPRELKLTAATRPPP 492

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BLAST of mRNA_Ecto-sp13_S_contig1538.4033.1 vs. uniprot
Match: D8LJF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF1_ECTSI)

HSP 1 Score: 764 bits (1974), Expect = 1.130e-255
Identity = 385/401 (96.01%), Postives = 386/401 (96.26%), Query Frame = 0

Query:   81 DISGNLRRLRLVLHSARGLVSSDVTGVSDPYCIVVPVRHDGSEVTSEKGETTWRRGVARQRPEEWQEAFELCRWCTPEDVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKAKRTKLEMKIAPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPRGRSPPGTPVREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRCSLDLADEFTCAWPALLLRHGAPSSGFGGEADEEGGERGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGGDCPRDKDGWTYGTDGSFSSLLADRTSGVSKE 481
            DISGNLRRLRLVLHSARGLVSSDVTGVSDPYCIVVPVRHDGSEVTSEKGETTWRRG ARQRPEEWQEAFELCRWCTPEDVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKAKRTKLEMKI PPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPR        VREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRCSLDLADEFTCAWPALLLRHGAPSSG GG+ADEEGG RGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGGDCPRDKDGWTYGTDGSFSSLLADRTSG   E
Sbjct:   88 DISGNLRRLRLVLHSARGLVSSDVTGVSDPYCIVVPVRHDGSEVTSEKGETTWRRGGARQRPEEWQEAFELCRWCTPEDVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKAKRTKLEMKITPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGGRSPSASPPRXXXXXXXXVREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRCSLDLADEFTCAWPALLLRHGAPSSGSGGDADEEGGGRGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGGDCPRDKDGWTYGTDGSFSSLLADRTSGQRAE 488

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1538.4033.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1538.4033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KJ77_9PHAE	9.350e-274	85.77	C2 domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D8LJF1_ECTSI	1.130e-255	96.01	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006614	Peroxin/Ferlin domain	SMART	SM00693	dysfn	coord: 380..448 e-value: 4.2 score: 10.0 coord: 545..617 e-value: 0.0044 score: 26.3
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 88..197 e-value: 2.3E-6 score: 27.8 coord: 2..81 e-value: 3.2E-5 score: 24.2
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 88..184 score: 9.139
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 86..229 e-value: 2.1E-11 score: 46.0
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 1..85 e-value: 3.7E-6 score: 29.0
IPR010482	Peroxin domain	PFAM	PF06398	Pex24p	coord: 384..494 e-value: 1.9E-6 score: 27.2
None	No IPR available	PANTHER	PTHR46502:SF2		coord: 88..192
None	No IPR available	PANTHER	PTHR46502	FAMILY NOT NAMED	coord: 88..192
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 83..193
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1538	contig	Ecto-sp13_S_contig1538:116..7720 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1538.4033.1	mRNA_Ecto-sp13_S_contig1538.4033.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1538 116..7720 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1538.4033.1 ID=prot_Ecto-sp13_S_contig1538.4033.1|Name=mRNA_Ecto-sp13_S_contig1538.4033.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=653bp
SYCRVEAGGEKSRTKVATGGTPFWNHRCTFAVSEAEAMSPGGGARICCLS
HRVAYQDSQIGESFIPFASLTSGKDYTETLDISGNLRRLRLVLHSARGLV
SSDVTGVSDPYCIVVPVRHDGSEVTSEKGETTWRRGVARQRPEEWQEAFE
LCRWCTPEDVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKAKRTKL
EMKIAPPPPATSRYSKTLGKYNINIKTPSINIKTPNILGGGGRSPSASPP
RGRSPPGTPVREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRC
SLDLADEFTCAWPALLLRHGAPSSGFGGEADEEGGERGGGVEKWRVSAGF
GGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWG
SGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGG
DCPRDKDGWTYGTDGSFSSLLADRTSGVSKEQKGTAVRCRRWVRPLQRTG
VVASTPALPPRTGAAAAAGAVEGEEVAATVEIPDGLKPFCRPELDGRVVA
LVHENQRYQPGAGWGSTDEDHLLPEDRAPLTGASGIHAIDDLDDIDPSSL
GGPPPGYRWEDEDPNHDDAFADGWNSGPWTYAESFGSLPPELKLTAATGL
PPL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006614	Peroxin/Ferlin
IPR000008	C2_dom
IPR035892	C2_domain_sf
IPR010482	Peroxin