prot_Ecto-sp13_S_contig15372.4032.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15372.4032.1
Unique Nameprot_Ecto-sp13_S_contig15372.4032.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15372.4032.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 8.570e-114
Identity = 228/250 (91.20%), Postives = 229/250 (91.60%), Query Frame = 0 
Query:   19 QAANYEAQLTALPKTEGDGDETAGAVVATSGGAETEVARLKSTIEDLESSRKTTARRLRDIMKKCSQNEERFLAAVETEKARADRFEEMLEDSRRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQAQEASGSSXXXXXXXXXXXXXXXXXXXXX----RESLDSAAGTTRGASAALRSQLADIK 264
            QAANYEAQLTALPKTE DGDETAGAVVA SGGAETEVARLKS IEDLESSRK TARRLRDIMKKCSQNEERFLAAVETEKARADRFEEMLED RRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQAQEASGSS            XXXXXXXXX    R+SLDSAAGTTRGASAALRSQLADIK
Sbjct: 2138 QAANYEAQLTALPKTEEDGDETAGAVVAASGGAETEVARLKSMIEDLESSRKMTARRLRDIMKKCSQNEERFLAAVETEKARADRFEEMLEDCRRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQAQEASGSSVIDDDEMSLGDAXXXXXXXXXXXXXRDSLDSAAGTTRGASAALRSQLADIK 2387
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15372.4032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNU8_9PHAE8.570e-11491.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..206
NoneNo IPR availableCOILSCoilCoilcoord: 94..132
NoneNo IPR availableCOILSCoilCoilcoord: 55..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15372contigEcto-sp13_S_contig15372:785..4164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15372.4032.1mRNA_Ecto-sp13_S_contig15372.4032.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15372 785..4173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15372.4032.1 ID=prot_Ecto-sp13_S_contig15372.4032.1|Name=mRNA_Ecto-sp13_S_contig15372.4032.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MEEEKEAICDDYEGRLQQQAANYEAQLTALPKTEGDGDETAGAVVATSGG
AETEVARLKSTIEDLESSRKTTARRLRDIMKKCSQNEERFLAAVETEKAR
ADRFEEMLEDSRRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAI
RRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEI
TKTVLARLQAQEASGSSVIDDDEMSLGGAPRGDDGGGGRESLDSAAGTTR
GASAALRSQLADIK
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