prot_Ecto-sp13_S_contig15371.4031.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15371.4031.1
Unique Nameprot_Ecto-sp13_S_contig15371.4031.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length254
Homology
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 1.410e-138
Identity = 233/254 (91.73%), Postives = 236/254 (92.91%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRG-------WQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            MTAGGVSKAS+GINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVR        G        Q  +MMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFE+
Sbjct: 1581 MTAGGVSKASRGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRRLSTSAAPGALSMKYMHQLALMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEL 1834          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA)

HSP 1 Score: 369 bits (946), Expect = 7.480e-114
Identity = 193/247 (78.14%), Postives = 211/247 (85.43%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            MT GG+SKASKGINLSEDIFAGYN TIRGGQ+ F EY QVGKGRDVGMQQIYKFEAKL+QGAAEQ+LSRDVNRLG RLDFFRL+SFYFGGLGYY+GNFIT++T+ FVVYF+LAL+VF  E IG+RK+ PEG LQ                M+LAGMG+LNT+PMLATL VEKGL  AL  V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS FDDLYRFFA SHFYLGFE+
Sbjct: 1291 MTRGGMSKASKGINLSEDIFAGYNNTIRGGQVVFCEYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDVNRLGARLDFFRLVSFYFGGLGYYIGNFITIVTIVFVVYFMLALSVFQAEKIGERKITPEGTLQ----------------MLLAGMGVLNTLPMLATLMVEKGLRAALITVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSSFDDLYRFFATSHFYLGFEL 1521          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A7S0GHQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHQ8_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.510e-96
Identity = 157/249 (63.05%), Postives = 191/249 (76.71%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEVCM 249
            MT GGVSKASKGINLSEDIFAGY+  IRGGQ+ FKEY+QVGKGRDVGM QIYKFEAKLSQGAAEQ+LSRDV R+  RLDF RL +FYFGG+G+Y  N +TVLTV  V Y V  LA++D E IGD+K+ P G LQ                M+L G+GLL T+P++ATL VE+G L A+ ++  VF++GGP++FMFHIQT+AHY  QT+L GGA+YR TGRGFVT H+  D+ +RFFA+SH YLGFE+ M
Sbjct:   83 MTRGGVSKASKGINLSEDIFAGYSNVIRGGQVGFKEYLQVGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMSHRLDFCRLFTFYFGGIGHYFSNVLTVLTVYVVTYLVALLAIYDIEVIGDQKVTPVGTLQ----------------MLLGGLGLLQTIPLIATLGVERGWLAAVQDIFSVFVTGGPLHFMFHIQTKAHYMAQTILVGGAKYRPTGRGFVTQHTPMDEQFRFFASSHLYLGFELAM 315          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA)

HSP 1 Score: 314 bits (805), Expect = 7.350e-95
Identity = 166/247 (67.21%), Postives = 197/247 (79.76%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            MT GG+SKASKGINLSEDIFAG+N  +RGG + FKEYVQVGKGRDVGMQQIYKFEAKL+QG AEQ+LSRDV+RL  R+DF RLLS YFGGLG+Y+ +F+TV TV FVVY +  LA+F  E+IGDRK+IPEG +Q                M L GMG+L T+PM +TL VEKG+  A+G VLQVF SGGP+YFMFHIQT+++YF QTLLAG A+YR TGRGFVT HS FD+ +RFFA+SHFYLGFE+
Sbjct: 1068 MTRGGISKASKGINLSEDIFAGFNNQLRGGNVEFKEYVQVGKGRDVGMQQIYKFEAKLAQGNAEQSLSRDVHRLAARVDFGRLLSLYFGGLGFYINSFLTVFTVFFVVYLMTYLALFGLEAIGDRKVIPEGVVQ----------------MCLGGMGILQTVPMFSTLAVEKGVASAVGTVLQVFFSGGPLYFMFHIQTKSYYFIQTLLAGNAKYRPTGRGFVTRHSSFDENFRFFASSHFYLGFEL 1298          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA)

HSP 1 Score: 312 bits (799), Expect = 5.950e-94
Identity = 165/217 (76.04%), Postives = 180/217 (82.95%), Query Frame = 0
Query:   31 QIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            ++ F+EY QVGKGRDVGMQQIYKFEAKL+QGAAEQ+LSRD NRLG RLDFFRL SFYFGGLGYY+GNFITV+T+ FVVYF+LA AVF  E IG+RK+ P G LQ                MMLAGMG+LNT+PMLATL VEKGL  AL  V QVF+SGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHS FDDLYRFFA SHFYLGFE+
Sbjct: 1720 KVVFREYAQVGKGRDVGMQQIYKFEAKLAQGAAEQSLSRDTNRLGARLDFFRLWSFYFGGLGYYIGNFITVVTIVFVVYFMLAEAVFQVEKIGERKITPVGTLQ----------------MMLAGMGVLNTLPMLATLMVEKGLRAALVVVGQVFVSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSTFDDLYRFFATSHFYLGFEL 1920          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A7S3LH45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH45_9STRA)

HSP 1 Score: 290 bits (742), Expect = 8.800e-94
Identity = 153/247 (61.94%), Postives = 187/247 (75.71%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            +T GG+SKASKGINLSEDIFAGYN   RGG + FKEYVQ+GKGRDVGM QIYKFEAKLSQGAAEQ+LSRDV R+ +RLDFFRLLSFY+GG+G+Y  N +T+LTV  VVY +  LAVF+ E IGDR + P G +Q                M+L G+GLL T+P+ ATL VE+G   +L E++ +F++GGP++FMFHIQT+A Y  QT+L GGA YR TGRGFVT H+ FD+ YRFFA SH YLG E+
Sbjct:   64 ITRGGISKASKGINLSEDIFAGYNNVNRGGTVGFKEYVQIGKGRDVGMSQIYKFEAKLSQGAAEQSLSRDVYRMCNRLDFFRLLSFYYGGIGHYFSNVLTILTVYVVVYLMTVLAVFNLEKIGDRMITPMGTIQ----------------MLLGGLGLLQTIPLFATLGVERGWWASLQEIIVIFVTGGPLHFMFHIQTKATYMAQTILVGGAIYRPTGRGFVTQHAPFDEQYRFFAGSHLYLGVEL 294          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA)

HSP 1 Score: 300 bits (769), Expect = 6.310e-90
Identity = 159/247 (64.37%), Postives = 190/247 (76.92%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            MT GGVSKASKGINLSEDIFAGYN  +RGG + FKEYVQ GKGRDVG QQIYKFEAKLSQG AEQ+LSRDV R+  R+DFFRLLS YFGG+G+Y GN +TV TV  V Y +L LA++D E IGDRK+ P G LQ                M+L GMGL+NT+P+ ATL VE+G   ++ E+ QVF++GGP++FMFHIQT+AHYF QT+L GGA+YRATGRGFVT HS F + +RFFA+SH YLG E+
Sbjct: 1514 MTRGGVSKASKGINLSEDIFAGYNNLVRGGGVDFKEYVQCGKGRDVGGQQIYKFEAKLSQGNAEQSLSRDVYRVAQRVDFFRLLSTYFGGIGHYCGNVLTVFTVYLVCYLMLGLALYDCEKIGDRKITPSGTLQ----------------MLLGGMGLMNTIPLFATLGVERGWWASMMEIFQVFVTGGPLHFMFHIQTKAHYFAQTILVGGAKYRATGRGFVTQHSPFAENFRFFASSHLYLGVEL 1744          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: F0YA81_AURAN (1,3-beta-glucan synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA81_AURAN)

HSP 1 Score: 298 bits (763), Expect = 4.080e-89
Identity = 158/246 (64.23%), Postives = 188/246 (76.42%), Query Frame = 0
Query:    2 TAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            T GGVSKASKGINLSEDIFAGY   IRGG +  KEY QVGKGRDVGMQQIYKFEAKLSQG AEQ LSRDV+R+  RLDF RLLS+YFGG+G+Y+ + +T++T+    Y  L LAV+  ESIG R ++P G++Q+                +LAG+GLLNT+P+LATL VE+GL  A  +V QVF SGGP+YF+FHIQTRAHYF QT+LAGGA YRATGRGFVT HS FD+ YRFFA SH +LG E+
Sbjct: 1767 TRGGVSKASKGINLSEDIFAGYTAMIRGGGVTMKEYAQVGKGRDVGMQQIYKFEAKLSQGNAEQCLSRDVSRIASRLDFPRLLSYYFGGIGHYINSALTIITIQVATYLALLLAVYGAESIGHRLVVPLGSVQI----------------LLAGLGLLNTLPLLATLAVERGLWAAAKDVAQVFASGGPLYFIFHIQTRAHYFTQTILAGGATYRATGRGFVTRHSTFDEQYRFFAASHLHLGVEL 1996          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A7S3H8Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Z7_9STRA)

HSP 1 Score: 293 bits (750), Expect = 4.120e-89
Identity = 151/247 (61.13%), Postives = 193/247 (78.14%), Query Frame = 0
Query:    1 MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            MT GG+SKAS+GINLSED+FAG+N TIRG  + FKEYVQVGKGRDVG+QQ YKFEAKL+QG AEQ+LSRD+NR+  RLDFFRL SFY+GG+G+Y+ N + + T+  VVY +LALA+F EE +  R + PEG LQ                ++L+GMG+L TMP+L TLTVEKG+L A+ E+  + LSGGP+YF+FHI+T+++YF QTL+AGGA+YR TGR FVT HS FD+ +RFFA+SH YLGFE+
Sbjct:  128 MTEGGMSKASRGINLSEDVFAGFNATIRGHSVGFKEYVQVGKGRDVGLQQTYKFEAKLAQGNAEQSLSRDMNRICGRLDFFRLFSFYYGGIGHYMANTMVMFTLVVVVYTMLALAIFKEEGVNGRAMHPEGVLQ----------------LLLSGMGILQTMPLLITLTVEKGVLAAISEIGFMILSGGPLYFIFHIETKSYYFSQTLMAGGAKYRPTGRAFVTSHSSFDENFRFFASSHIYLGFEI 358          
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Match: A0A8J2T241_9STRA (1,3-beta-glucan synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T241_9STRA)

HSP 1 Score: 296 bits (759), Expect = 1.400e-88
Identity = 160/246 (65.04%), Postives = 187/246 (76.02%), Query Frame = 0
Query:    2 TAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQIYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFITVLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGVMMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTRAHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEV 247
            T GGVSKAS+GINLSEDIFAGY   IRGG +  +EY QVGKGRDVGMQQIYKFEAKLSQG AEQ L+RDV+R+  RLDF RLLS+YFGG+G+Y+ + +TV T+    Y  L LAV+  ESIG R ++P G LQV                +LAG+GLLNT+P+LATL VE+GLL A  +V QVF SGGP+YF+FHIQTRAHYF QTLLAGGA YRATGRGFVT H+ FD+ YRFFA SH YLG E+
Sbjct: 1671 TRGGVSKASRGINLSEDIFAGYTAVIRGGGVTMREYAQVGKGRDVGMQQIYKFEAKLSQGNAEQCLARDVSRVAARLDFPRLLSYYFGGIGHYINSALTVATIQVATYLSLLLAVYGAESIGHRLVVPLGTLQV----------------VLAGLGLLNTLPLLATLAVERGLLAATRDVAQVFASGGPLYFVFHIQTRAHYFMQTLLAGGATYRATGRGFVTTHNSFDEQYRFFAASHLYLGVEL 1900          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15371.4031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFR3_9PHAE1.410e-13891.731,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
A0A835Z4B5_9STRA7.480e-11478.141,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S0GHQ8_9STRA1.510e-9663.05Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2UV62_9STRA7.350e-9567.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z1S2_9STRA5.950e-9476.041,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A7S3LH45_9STRA8.800e-9461.94Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2QVX6_9STRA6.310e-9064.371,3-beta-glucan synthase (Fragment) n=1 Tax=Tripar... [more]
F0YA81_AURAN4.080e-8964.231,3-beta-glucan synthase n=1 Tax=Aureococcus anoph... [more]
A0A7S3H8Z7_9STRA4.120e-8961.13Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J2T241_9STRA1.400e-8865.041,3-beta-glucan synthase n=1 Tax=Pelagomonas calce... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003440Glycosyl transferase, family 48PFAMPF02364Glucan_synthasecoord: 2..251
e-value: 1.2E-70
score: 238.8
NoneNo IPR availablePANTHERPTHR12741LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1coord: 1..250
NoneNo IPR availablePANTHERPTHR12741:SF71,3-BETA-GLUCAN SYNTHASE COMPONENT FKS1-RELATEDcoord: 1..250
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..173
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 174..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..168
NoneNo IPR availableTMHMMTMhelixcoord: 83..117
NoneNo IPR availableTMHMMTMhelixcoord: 173..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15371contigEcto-sp13_S_contig15371:666..2427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15371.4031.1mRNA_Ecto-sp13_S_contig15371.4031.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15371 654..2427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15371.4031.1 ID=prot_Ecto-sp13_S_contig15371.4031.1|Name=mRNA_Ecto-sp13_S_contig15371.4031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp
MTAGGVSKASKGINLSEDIFAGYNGTIRGGQIFFKEYVQVGKGRDVGMQQ
IYKFEAKLSQGAAEQTLSRDVNRLGDRLDFFRLLSFYFGGLGYYVGNFIT
VLTVTFVVYFVLALAVFDEESIGDRKLIPEGNLQVRETVWCEGRGWQRGV
MMLAGMGLLNTMPMLATLTVEKGLLVALGEVLQVFLSGGPMYFMFHIQTR
AHYFYQTLLAGGAQYRATGRGFVTHHSCFDDLYRFFANSHFYLGFEVCMY
MYY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003440Glyco_trans_48