prot_Ecto-sp13_S_contig15363.4028.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15363.4028.1
Unique Nameprot_Ecto-sp13_S_contig15363.4028.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: D8LRF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF2_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.260e-41
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    6 SSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGSR 86
            S  LGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRF Q NSEVAVDWEVI AKKEKEREDEHARAGSR
Sbjct:  351 SPFLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFFQSNSEVAVDWEVISAKKEKEREDEHARAGSR 431          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: D8LIC7_ECTSI (Intraflagellar transport protein 80 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC7_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 4.420e-39
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGSR 86
            IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVI AKKEKEREDEHARAGSR
Sbjct:  696 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVISAKKEKEREDEHARAGSR 770          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A7S2CV51_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CV51_9STRA)

HSP 1 Score: 102 bits (255), Expect = 8.050e-25
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    3 LSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGS 85
            L+  ++   IRLFRW RALELAV+ ++HVDTVLGYRQ +L   GK+ETDKRFLQ+   V +DWE I AKK++E++DE AR+G+
Sbjct:  191 LTYRAIKMNIRLFRWGRALELAVKSRSHVDTVLGYRQKYLDQFGKKETDKRFLQYAESVEIDWEAIQAKKQQEKDDERARSGN 273          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A7S2G6X5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6X5_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.260e-23
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = 0
Query:    3 LSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGS 85
            L+  ++   IRLFRW RALELAV+ ++HVDTVLGYRQ +L   GK+ETDKRFLQ+   V +DWE I AKK++E++DE AR+G+
Sbjct:  686 LTYRAIKMNIRLFRWGRALELAVKSRSHVDTVLGYRQKYLDQFGKKETDKRFLQYAESVEIDWEAIQAKKQQEKDDERARSGN 768          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A835ZN10_9STRA (Intraflagellar transport protein 80 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZN10_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.840e-22
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARA 83
            +RLFRWSRALELAVQ+++HVDTVLGYRQ  L +  K+ETD RFLQ+  +V VDW+VI AK+EKE EDE  +A
Sbjct:  692 LRLFRWSRALELAVQYRSHVDTVLGYRQRHLAAFKKQETDARFLQYAEQVTVDWDVIAAKEEKELEDERTKA 763          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A2P4YQH0_9STRA (Intraflagellar Transport protein 80 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YQH0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.850e-21
Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    3 LSISSLLGQIRLFRWSRALELAVQHKT----HVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKERE 77
            LS  S+   +RLFRW RAL+LA++H T    HVDTVL YR+ FL ++  +ETDK+FLQ++ +VA+DWE I  KKE ERE
Sbjct:    2 LSWPSIKLNLRLFRWDRALDLAIKHTTDAGTHVDTVLAYRERFLAANKLQETDKKFLQYSKQVAIDWETISKKKELERE 80          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: UPI001C3495D8 ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C3495D8)

HSP 1 Score: 87.8 bits (216), Expect = 1.220e-20
Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGS 85
            I LF W RALE+AV+HKTHVDTVL YRQ FL+  G++ET+KRFLQ+   V VDWE I AK E E   E  RA +
Sbjct:   29 IDLFNWERALEMAVKHKTHVDTVLAYRQRFLQKFGRKETNKRFLQYAEGVEVDWEKIQAKIEMELSKERERAAN 102          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: UPI001E1DB922 (intraflagellar transport protein 80 homolog isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB922)

HSP 1 Score: 91.7 bits (226), Expect = 1.050e-19
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHAR 82
            + L+  ++L  I+L+ W RALELAV+HKTHVDTVLGYRQ ++   GK+ET+KRFLQ+   + +DWE I AK E E + E  R
Sbjct:  692 AGLTFRAILLNIQLYNWDRALELAVKHKTHVDTVLGYRQKYMTQYGKQETNKRFLQYKEGIEIDWEKIEAKIEMEYQKERER 773          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A0S7GS10_9TELE (IFT80 n=5 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GS10_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 1.060e-19
Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   12 IRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGS 85
            I LF W+RALELAV+HKTHVDTVL YR  FL++ G++ET+KRFLQ++  V VDWE I AK E E   E  +A +
Sbjct:   71 IDLFNWNRALELAVKHKTHVDTVLAYRGKFLQTFGRKETNKRFLQYSEGVEVDWEKIQAKIEMELSKEREKAAN 144          
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Match: A0A2G8JQ60_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JQ60_STIJA)

HSP 1 Score: 90.5 bits (223), Expect = 1.120e-19
Identity = 48/86 (55.81%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEETDKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGSR 86
            +SL   +++  I L+ W RALELAV+HKTHVDTVLGYRQ FL S  K ET+KRFLQF   V V+WE I AK E E + E  R  ++
Sbjct:  269 ASLIFRAIMMNISLYNWDRALELAVKHKTHVDTVLGYRQKFLNSFNKVETNKRFLQFAQGVEVNWEQIQAKIESEYQKEKERPNAK 354          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15363.4028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRF2_ECTSI2.260e-4193.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIC7_ECTSI4.420e-3998.67Intraflagellar transport protein 80 n=2 Tax=Ectoca... [more]
A0A7S2CV51_9STRA8.050e-2559.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2G6X5_9STRA1.260e-2359.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZN10_9STRA2.840e-2266.67Intraflagellar transport protein 80 n=1 Tax=Tribon... [more]
A0A2P4YQH0_9STRA6.850e-2155.70Intraflagellar Transport protein 80 n=1 Tax=Phytop... [more]
UPI001C3495D81.220e-2060.81(large yellow croaker) hypothetical protein n=1 Ta... [more]
UPI001E1DB9221.050e-1953.66intraflagellar transport protein 80 homolog isofor... [more]
A0A0S7GS10_9TELE1.060e-1959.46IFT80 n=5 Tax=Poeciliopsis prolifica TaxID=188132 ... [more]
A0A2G8JQ60_STIJA1.120e-1955.81Putative intraflagellar transport protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR24098FAMILY NOT NAMEDcoord: 7..80
NoneNo IPR availablePANTHERPTHR24098:SF0INTRAFLAGELLAR TRANSPORT 80 HOMOLOG (CHLAMYDOMONAS)coord: 7..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15363contigEcto-sp13_S_contig15363:3..1146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15363.4028.1mRNA_Ecto-sp13_S_contig15363.4028.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15363 3..1146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15363.4028.1 ID=prot_Ecto-sp13_S_contig15363.4028.1|Name=mRNA_Ecto-sp13_S_contig15363.4028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
SSLSISSLLGQIRLFRWSRALELAVQHKTHVDTVLGYRQAFLKSSGKEET
DKRFLQFNSEVAVDWEVIGAKKEKEREDEHARAGSR
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