prot_Ecto-sp13_S_contig15361.4027.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15361.4027.1
Unique Nameprot_Ecto-sp13_S_contig15361.4027.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15361.4027.1 vs. uniprot
Match: D7FUQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ6_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 1.840e-97
Identity = 166/189 (87.83%), Postives = 175/189 (92.59%), Query Frame = 0 
Query:    1 LEGVSQESLCYVEITHEGASSGQTRVTSTYDASPSWNRTLTLPLNSLQQGHLKVSVCPGAPLDEERLAELAFGGKLPPAPLGFVSVPVADLAGLERSRPFTLEAGGGSPVARGPRSIDLGFTVVEDSAANGNGDGGKEPAHSSGVFSTSDFSVDPPLPVHSSSSSTRQSEPRARWEGAPESNGGVGKMF 189
            L+G  QESLCY+E+THEG SSGQTRVTST DAS SW+RTLTLPLNSLQQGHLKVSVCPGAPLDEERLAELAFGGKLPPAPLGFVSVPVADLAGLERSRPFTLEA GGSP+ARGPRSIDLGFTVVEDSAANG+GDGGKEPAHSSG+FSTSDFSVDPPLPVHSSSSSTR+SEPRAR +GA E  GG    F
Sbjct:   18 LQGALQESLCYIEVTHEGTSSGQTRVTSTCDASQSWSRTLTLPLNSLQQGHLKVSVCPGAPLDEERLAELAFGGKLPPAPLGFVSVPVADLAGLERSRPFTLEAEGGSPIARGPRSIDLGFTVVEDSAANGSGDGGKEPAHSSGIFSTSDFSVDPPLPVHSSSSSTRRSEPRARSKGAGELIGGGAGPF 206
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BLAST of mRNA_Ecto-sp13_S_contig15361.4027.1 vs. uniprot
Match: A0A6H5JRR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR9_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 2.350e-80
Identity = 140/153 (91.50%), Postives = 145/153 (94.77%), Query Frame = 0 
Query:   48 QQGHLKVSVCPGAPLDEERLAELAFGGKLPPAPLGFVSVPVADLAGLERSRPFTLEAGGGSPVARGPRSIDLGFTVVEDSAANGNGDGGKEPAHSSGVFSTSDFSVDPPLPVHSSSSSTRQSEPRARWEGAPESNGGVGKMFGSGGAVQQQAT 200
            +QGHLKVSVCPGAPLDEERLAELAF GKLPPAPLGFV VPVADLAGLERSRPFTLEA GGSPVARGPRSIDLGFTVVED AAN  GDGGKEPAHSSG+FSTSDFSVDPPLPVHSSSSSTR+SEPRARWEGA ESNGG G++FGSGGAVQQQAT
Sbjct:    3 RQGHLKVSVCPGAPLDEERLAELAFEGKLPPAPLGFVGVPVADLAGLERSRPFTLEAEGGSPVARGPRSIDLGFTVVEDIAANRLGDGGKEPAHSSGIFSTSDFSVDPPLPVHSSSSSTRRSEPRARWEGAGESNGGAGEVFGSGGAVQQQAT 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15361.4027.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUQ6_ECTSI1.840e-9787.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRR9_9PHAE2.350e-8091.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 8..57
e-value: 1.6E-4
score: 21.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15361contigEcto-sp13_S_contig15361:445..4179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15361.4027.1mRNA_Ecto-sp13_S_contig15361.4027.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15361 444..4179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15361.4027.1 ID=prot_Ecto-sp13_S_contig15361.4027.1|Name=mRNA_Ecto-sp13_S_contig15361.4027.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
LEGVSQESLCYVEITHEGASSGQTRVTSTYDASPSWNRTLTLPLNSLQQG
HLKVSVCPGAPLDEERLAELAFGGKLPPAPLGFVSVPVADLAGLERSRPF
TLEAGGGSPVARGPRSIDLGFTVVEDSAANGNGDGGKEPAHSSGVFSTSD
FSVDPPLPVHSSSSSTRQSEPRARWEGAPESNGGVGKMFGSGGAVQQQAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom