prot_Ecto-sp13_S_contig15355.4022.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15355.4022.1
Unique Nameprot_Ecto-sp13_S_contig15355.4022.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length681
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Match: D7FM48_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM48_ECTSI)

HSP 1 Score: 864 bits (2233), Expect = 2.570e-310
Identity = 496/585 (84.79%), Postives = 511/585 (87.35%), Query Frame = 0 
Query:   99 MPLATAATTAVPPAPSAQSPAAAAVLFGTENYPPVGASSGVDRLRKRSRLCLGKHRRALPSQHAAVSQPSLGTAGSPSFQERFRSPYTSSAALAPPAEAIGYPWGTSPGLSEGRIDRAGVLAPATWTIGRPSSGQSPPFVGLENLGETCYVNAVLQALTACHGALTSSHGGGGGWHDVGSEXXXXXXXXXXXXXXXXXXXXXAGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAVSPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSLIELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDDRGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRTARENFTELTLPPLLPP-QHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFESESLAGNNKLSDSGGGFYDLIGAILHQGQTLASGHYTFARHAA--DSASFLEQXXXXXXXXXXXXXXXXXXXXXXXXXXXSTCGKSSVALFDDATVRWLSPEEERAVLRGGGGGFGDPFLVFYARRP 680
            MP ATAATTAV PAPSAQS   AAVLFG EN+PPVG+SSGV+RLRKRSRLCLGK RRALP+QHAAV QPS+GTAGSPSFQERFRSP+TSSAALAPPAEAIGYPWG SPGLSE  +DRAGVLAPA WTI RPSSG SPPFVGL+NLGETCYVNAVLQALTACHG LTSS GGGGGWHDVGSE                      GTAV V G TGTQR+PVL ALEQVLGEMETRNRAL QQQLVA GS+TAVS PAEPESTGSGATSSPESKTCQPY QTPLRPSASTGEGVLVEAIAPT L+ELIRGGWLSADR+RLGGGGAGA G T+FGTGQACVSELLGKFLGLVVDD GS  TS GGVGG RRSGG+HSSS C LAQAFRGTLCARTLCVECERDRTARE+FTELTLPPLLPP QHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFE ESLAGNNKL DSG  FYDLIG ILHQGQTLASGHYTFA HAA  DSASFLE XXXXXXXXXXXXXXXXXXXXXXXX   STCGK   ALFDDATV WLSPEEERAVLRGGGG FGDPFLVFYARRP
Sbjct:    1 MPHATAATTAVTPAPSAQS--RAAVLFGAENHPPVGSSSGVNRLRKRSRLCLGKRRRALPAQHAAVGQPSIGTAGSPSFQERFRSPFTSSAALAPPAEAIGYPWGASPGLSETCLDRAGVLAPAAWTIERPSSGPSPPFVGLKNLGETCYVNAVLQALTACHGVLTSSRGGGGGWHDVGSEGSEGSCSTPPAADAAPAGAASEGTAVLVAGVTGTQRNPVLAALEQVLGEMETRNRALSQQQLVAFGSQTAVSSPAEPESTGSGATSSPESKTCQPYDQTPLRPSASTGEGVLVEAIAPTFLVELIRGGWLSADRSRLGGGGAGATGSTEFGTGQACVSELLGKFLGLVVDDGGSGATSLGGVGG-RRSGGSHSSSFCCLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFEGESLAGNNKLCDSGDVFYDLIGVILHQGQTLASGHYTFALHAAAGDSASFLEXXXXXXXXXXXXXXXXXXXXXXXXXG--STCGKPGFALFDDATVGWLSPEEERAVLRGGGGVFGDPFLVFYARRP 580
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BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Match: A0A6H5L2L7_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L7_9PHAE)

HSP 1 Score: 523 bits (1348), Expect = 8.720e-177
Identity = 324/540 (60.00%), Postives = 335/540 (62.04%), Query Frame = 0 
Query:  262 ALTSSHGGGGGWHDVGSEXXXXXXXXXXXXXXXXXXXXXAGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAVSPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSLIELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDDRGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRTARENFTELTLPPLLPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFESESLAGNNK----------------------------------------------------------------------------------------------------------------------LSDSGGGFYDLIGAILHQGQTLASGHYTFARHAA--DSASFL-EQXXXXXXXXXXXXXXXXXXXXXXXXXXXSTCGKSSVALFDDATVRWLSPEEERAVLRGGGGGFGDPFLVFYARRP 680
            AL SS GGGGGWHDVGSE                     AGTA PVG ETGTQR+PVL+ALEQVLGEMETRNRALFQQQLVAAGS+TAVSPPAEPEST SGATSS ESKTCQ + QTPLRPSASTGEGV VE+IAPTSL+ELI GGWLSADRARLGGGGAG  G TDFGTGQACVSELLGKFLGLVVDD               RSGGTHSSS CGLAQAFRGTLCARTLCVECERDRTARE+FTELTLPPLLPPQHAPPLTAQ AIPAAENDGGPSLRGR RT+QTL+DGVFE ESLAGNNK                                                                                                                      L DSG  FYDLIGAILHQGQTLASGHYTFA +AA  D ASFL +QXXXXXXX                    ST GK   ALFDDATVRWLS EEERAVLRG GGGFGDPFLVFYARRP
Sbjct:    2 ALASSSGGGGGWHDVGSEGSEGVSSTPPAADAAPAGAALAGTAAPVGRETGTQRNPVLVALEQVLGEMETRNRALFQQQLVAAGSQTAVSPPAEPESTSSGATSSAESKTCQWFDQTPLRPSASTGEGVRVESIAPTSLVELIHGGWLSADRARLGGGGAGTTGSTDFGTGQACVSELLGKFLGLVVDDXXXXXXXXXXXX-XXRSGGTHSSSFCGLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPQHAPPLTAQRAIPAAENDGGPSLRGRHRTIQTLIDGVFERESLAGNNKVWCEACRQWTEAERRSSVHSPPGLLALHVRPGTRKRSSPCLYPKALARASGGAPDSVVGDVRRGADGRLPAGSREEAIERTLVVRKAARCQFHGGGVNSXXXXXXXXXXXSVDSCTGQLCDSGDIFYDLIGAILHQGQTLASGHYTFAINAAAGDWASFLAQQXXXXXXXADRDNRALVQQGPPGATAAGSTYGKPDFALFDDATVRWLSLEEERAVLRGDGGGFGDPFLVFYARRP 540
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15355.4022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM48_ECTSI2.570e-31084.79USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L7_9PHAE8.720e-17760.00USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 604..624
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 221..657
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..680
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 235..260
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 432..679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15355contigEcto-sp13_S_contig15355:974..3376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15355.4022.1mRNA_Ecto-sp13_S_contig15355.4022.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15355 974..3376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15355.4022.1 ID=prot_Ecto-sp13_S_contig15355.4022.1|Name=mRNA_Ecto-sp13_S_contig15355.4022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=681bp
MPRRYDTRSTTKASCSTAAAVAANAQAISNPTSGTAGHAAAEAALLAPPP
RISSQVVTGDGQQREILPAAAAAAAAALGATKRADSHLFPQVARKVPDMP
LATAATTAVPPAPSAQSPAAAAVLFGTENYPPVGASSGVDRLRKRSRLCL
GKHRRALPSQHAAVSQPSLGTAGSPSFQERFRSPYTSSAALAPPAEAIGY
PWGTSPGLSEGRIDRAGVLAPATWTIGRPSSGQSPPFVGLENLGETCYVN
AVLQALTACHGALTSSHGGGGGWHDVGSEGSEGSSSTPPAADAAPAGAAS
AGTAVPVGGETGTQRDPVLIALEQVLGEMETRNRALFQQQLVAAGSETAV
SPPAEPESTGSGATSSPESKTCQPYHQTPLRPSASTGEGVLVEAIAPTSL
IELIRGGWLSADRARLGGGGAGAAGLTDFGTGQACVSELLGKFLGLVVDD
RGSRPTSPGGVGGQRRSGGTHSSSLCGLAQAFRGTLCARTLCVECERDRT
ARENFTELTLPPLLPPQHAPPLTAQGAIPAAENDGGPSLRGRRRTMQTLV
DGVFESESLAGNNKLSDSGGGFYDLIGAILHQGQTLASGHYTFARHAADS
ASFLEQQQQQQQQADRDNRALEQQGPPGAAAAGSTCGKSSVALFDDATVR
WLSPEEERAVLRGGGGGFGDPFLVFYARRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf