prot_Ecto-sp13_S_contig15344.4017.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15344.4017.1
Unique Nameprot_Ecto-sp13_S_contig15344.4017.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length289
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15344.4017.1 vs. uniprot
Match: D8LQC6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC6_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 2.970e-52
Identity = 246/289 (85.12%), Postives = 247/289 (85.47%), Query Frame = 0 
Query:    1 MPTPTAGDAATEAGNGTAAEP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAEAMRLAKRVERFGRIAPVTESEVAEKMXXXXXXXXXXXXXXGGKQGTKRSLNSEEEAKRKKRMERFGIVDEKEEAAKRAEAEAXXXXXXXXXXXXXXXXXXXXXXVAAKVAWLASEQAEKKAKRIARFGEDTTXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGRGSXXXXXXXRERXXXXXXXXXXXXXXXXXXXGGAVSATAMLSQGLKSSR 288
            MPTPT GDAATEAGNGTAAEP A       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AEAMRLAKRVERFGRIAPVTESEVAEKM              GGKQGTKRSLN EEEAKRKKRMERFGIVD+KEEAAKR EAEAXXXXXXXXXXXXXXXXXXXXXX     AWLASEQAEKKAKRIARFGEDTT   XXXXXXXXXXXXXXXXXXXXXX  RSGRGS  XXXXXRERXXXXXXXXXXXXXXXXXXX G VSATAMLSQGLKSSR
Sbjct:   50 MPTPTVGDAATEAGNGTAAEPPAEPAVEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAMRLAKRVERFGRIAPVTESEVAEKMAMRREKFGLPEPAAGGKQGTKRSLNPEEEAKRKKRMERFGIVDDKEEAAKRTEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLASEQAEKKAKRIARFGEDTTAVAXXXXXXXXXXXXXXXXXXXXXX--RSGRGSGGXXXXXRERXXXXXXXXXXXXXXXXXXXXGPVSATAMLSQGLKSSR 336
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15344.4017.1 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 7.830e-35
Identity = 136/157 (86.62%), Postives = 136/157 (86.62%), Query Frame = 0 
Query:    1 MPTPTAGDAATEAGNGTAAEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAEAMRLAKRVERFGRIAPVTESEVAEKMXXXXXXXXXXXXXXGGKQGTKRSLNSEEEAKRKKRMERFGIVDEKEEAAKRAEAE 157
            MPTPT GDAATEAGNGTAAEPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AEAMRLAKRVERFGRIAPVTE EVAEKM              GGKQGTKRSLN EEEAKRKKRMERFGIVDEKEEAAKRAEAE
Sbjct:   50 MPTPTVGDAATEAGNGTAAEPAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAMRLAKRVERFGRIAPVTEREVAEKMAMRREKFGLPEPAAGGKQGTKRSLNPEEEAKRKKRMERFGIVDEKEEAAKRAEAE 206
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15344.4017.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQC6_ECTSI2.970e-5285.12SAP domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KM35_9PHAE7.830e-3586.62SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..166
NoneNo IPR availablePANTHERPTHR46551FAMILY NOT NAMEDcoord: 13..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15344contigEcto-sp13_S_contig15344:29..2379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15344.4017.1mRNA_Ecto-sp13_S_contig15344.4017.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15344 2..2379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15344.4017.1 ID=prot_Ecto-sp13_S_contig15344.4017.1|Name=mRNA_Ecto-sp13_S_contig15344.4017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=289bp
MPTPTAGDAATEAGNGTAAEPAEPAVEATPAATAEEATPAAQAEPGSTTA
DGEVAADTATAAPVVVTATDAAAAAEAMRLAKRVERFGRIAPVTESEVAE
KMAMRREKFGLSEPATGGKQGTKRSLNSEEEAKRKKRMERFGIVDEKEEA
AKRAEAEAAKRAARQEKFGYVNPDAEKKAKVAAKVAWLASEQAEKKAKRI
ARFGEDTTAAAATPKSTTPQQSSGKKGGGSGGGGGRSGRGSGGGKGGGRE
RGGRNRRQSGGGGGDGRGRGGGAVSATAMLSQGLKSSR*
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