prot_Ecto-sp13_S_contig1534.4014.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1534.4014.1
Unique Nameprot_Ecto-sp13_S_contig1534.4014.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length830
Homology
BLAST of mRNA_Ecto-sp13_S_contig1534.4014.1 vs. uniprot
Match: A0A6H5L4I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I2_9PHAE)

HSP 1 Score: 920 bits (2377), Expect = 1.950e-312
Identity = 734/891 (82.38%), Postives = 747/891 (83.84%), Query Frame = 0
Query:    1 MDRLPRGLRAKLRSSATGIKSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VHGPDAHRIDRADTDTYRNNRVDTDIEEESIRAIGEGSRHQSSGGTPSRGXXXXXXXXXXXVEERPGRSKSFFVGLGRWGPGRRRSESTPELSSPVAGXXXXXXXXXXXXXXXXXXXXXXXXNTRRNSLFSSFTGERPSVAPSVDPSPDSNNQGAARRFGKRSPGAGKRKGLRKSQTMVDVPAGRRSPPAPEPLRSAIGSGGKKAWGRSSRATTAATVDVEDDLEPRQQRAKSTSGGRAARTTRDKRSSPDARSSSGRTRWVRGRQSSS--------------------------------------------------------RTLGAGLSSKSTPDPVVQGRTGRLPRQTVSPTPVERLGTSVSSESSSRSA-KAEKSTTGGDREHPAREDAASAERVTALLKAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXXRSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNFWNGGGGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VAGHWGGFDRDGARQRRNRSAAAAVSTNGVDSKAVWKPDGTRYPASAQNQGHRGDEEENEDEGXXXXXXXXXXXXXXXGFFQTLRRKLFEGDKASSDHKSASAGAAASEVKNEPPSLHLPTPAKQTAAPVAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQRSSPAIMILPPPKPAERIPPANHPDAGAGGSRPVERSRAVTSAAPVPPPLAPELAEEAAAKFGLVRMEVA 829
            MDRLPRGLRAKL SSATG+KSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VHGPDAHRIDRADTDTYRNNRVDTDIEEESIRAI EGSRHQSSGGTPSRG           VEERPGRSKSFFVGLGRWGPGRRRSEST E SSPVA XXXXXXXXXXXXXXXXXXXXX   NTRRNSLFS  +GERPSVAPSVDP PDSNNQGAARRFGKRSPGAG+RKGLRKSQTMVDVPAGRRSPPAPEPLRSA GSGGKKAWGRSSRATTAATVDVEDDLEPRQQRAKSTSGGRAA TTRDKRSSPDARSSSGRT+W RGRQSSS                                                        RTLGAGLSSKSTPD VVQ RTGRL RQTVSPTPVERLGTS SS+SSS S  KAEKSTTGGDREHPAREDAAS ERV ALLKAEEDAEARRQLEHRI+TLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXX +SSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGN WNGG    XX                XXXXXXXXX   VAGHWGGFDRDGARQ+RN SAAAAVSTNGVDSK VWKPDGTRYPASAQNQG RG+E       XXXXXXXXXXXXXXX FFQ LRRKLF+GDK SSDHKSA+AGA ASEVKN PPSL LPTP KQTAAPVAAVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      KQRSSPAIMILPP KPAERIPPANHPDAGAGGSRPVERSRAV+SAAPVPPP+APELAEEAAAKFGLVRMEVA
Sbjct:  944 MDRLPRGLRAKLLSSATGMKSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHGPDAHRIDRADTDTYRNNRVDTDIEEESIRAISEGSRHQSSGGTPSRGGAEEEDE----VEERPGRSKSFFVGLGRWGPGRRRSESTREFSSPVAXXXXXXXXXXXXXXXXXXXXXXTPANTRRNSLFS-LSGERPSVAPSVDPPPDSNNQGAARRFGKRSPGAGRRKGLRKSQTMVDVPAGRRSPPAPEPLRSAKGSGGKKAWGRSSRATTAATVDVEDDLEPRQQRAKSTSGGRAAATTRDKRSSPDARSSSGRTKWGRGRQSSSVGAEYYEEDXXXXVVPRRRAQSTAGAYQASAPAAEGVGKAKKKGSSRAKGVWGSFQRTLGAGLSSKSTPDIVVQRRTGRLARQTVSPTPVERLGTSDSSKSSSHSEQKAEKSTTGGDREHPAREDAASPERVAALLKAEEDAEARRQLEHRIVTLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXNQSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNLWNGGXXXXXXDKDGGDSPNGDGGLGGXXXXXXXXXGGGVAGHWGGFDRDGARQKRNCSAAAAVSTNGVDSKGVWKPDGTRYPASAQNQGRRGNEXXXX---XXXXXXXXXXXXXXXXFFQALRRKLFDGDKTSSDHKSAAAGATASEVKNGPPSLQLPTPVKQTAAPVAAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-----KQRSSPAIMILPPSKPAERIPPANHPDAGAGGSRPVERSRAVSSAAPVPPPMAPELAEEAAAKFGLVRMEVA 1821          
BLAST of mRNA_Ecto-sp13_S_contig1534.4014.1 vs. uniprot
Match: D8LJ12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ12_ECTSI)

HSP 1 Score: 744 bits (1922), Expect = 4.370e-258
Identity = 576/680 (84.71%), Postives = 592/680 (87.06%), Query Frame = 0
Query:    1 MDRLPRGLRAKLRSSATGIKSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VHGPDAHRIDRADTDTYRNNRVDTDIEEESIRAIGEGSRHQSSGGTPSRGXXXXXXXXXXXVEERPGRSKSFFVGLGRWGPGRRRSESTPELSSPVAGXXXXXXXXXXXXXXXXXXXXXXXXNTRRNSLFSSFTGERPSVAPSVDPSPDSNNQGAARRFGKRSPGAGKRKGLRKSQTMVDVPA-GRRSPPAPEPLRSAIGSGGKKAWGRSSRATTAATVDVEDDLEPRQQRAKSTSGGRAARTT-RDKRSSPDARSSSGRTRWVRGRQSSSRTLGAGLSSKSTPDPVVQGRTGRLPRQTVSPTPVERLGTSVSSESSSRSAKAEKSTTGGDREHPAREDAASAERVTALLKAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXXRSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNFWNGGGGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGHWGGFDRDGARQRRNRSAAAAVSTNGVD--SKAVWKPDGTRYPASAQNQGHRGDEEENEDEGXXXXXXXXXXXXXXXGFFQTLRRKLFEGDKAS 674
            MDRLPRGLRAKLRSSATG+KSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VH PDA+RI+RADTDTY       DIEEESIRAI EGSRHQSSGGTPSRG           V ERPGR+KSFFVGLGRWGPGRRRS ST ELSSPV  XXXXXXXXXXXXXXXXXXXXXXXXNTRRNSLFSSFTGERPSVAPSVDPSPD+NNQGAARRFGK+SPGAGKRKGL KSQTMVDVPA G RSPP PEPLRSA GSGGKKAWGR+SRATTAATVDVEDDLEPRQQRAKSTS      TT RDKR+SPDARS  GRTRW RGRQSSSRTLG GLSSKSTPDPVVQGRTGRL RQT SPTPVE LGTS       RS KA+KSTTG DREHPAREDAASAERV  LLKAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXX +SSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNFWN GGGKD               XXXXXXXXX     +AGHWGGFDRDGARQ+RNRSAAAAVS+NG+D  SKAVWKPDGTRY ASA+NQG RGD+E NED  XXXXXXXXXXXXXXXGFFQ LRRKLFEGDK S
Sbjct:   27 MDRLPRGLRAKLRSSATGMKSPEWDRHDRLVAQLSADQDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVPDAYRIERADTDTYXXXXXXXDIEEESIRAISEGSRHQSSGGTPSRGGAEGEEEEE--VGERPGRNKSFFVGLGRWGPGRRRSASTQELSSPVXXXXXXXXXXXXXXXXXXXXXXXXXXNTRRNSLFSSFTGERPSVAPSVDPSPDNNNQGAARRFGKKSPGAGKRKGLLKSQTMVDVPATGLRSPPPPEPLRSAKGSGGKKAWGRTSRATTAATVDVEDDLEPRQQRAKSTSXXXXXXTTTRDKRASPDARSGPGRTRWGRGRQSSSRTLGTGLSSKSTPDPVVQGRTGRLRRQTASPTPVEGLGTSSXXXXXXRSEKAKKSTTGRDREHPAREDAASAERVATLLKAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAXXXXXXXXXXXXXXXXNQSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNFWNAGGGKDGGDISNGDGGLGGGQXXXXXXXXXG----IAGHWGGFDRDGARQQRNRSAAAAVSSNGIDIDSKAVWKPDGTRYLASARNQGRRGDDEWNEDGXXXXXXXXXXXXXXXXGFFQALRRKLFEGDKTS 700          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1534.4014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4I2_9PHAE1.950e-31282.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ12_ECTSI4.370e-25884.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 635..655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1534contigEcto-sp13_S_contig1534:11489..15956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1534.4014.1mRNA_Ecto-sp13_S_contig1534.4014.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1534 9606..16001 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1534.4014.1 ID=prot_Ecto-sp13_S_contig1534.4014.1|Name=mRNA_Ecto-sp13_S_contig1534.4014.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=830bp
MDRLPRGLRAKLRSSATGIKSPEWDRHDRLVAQLSADQDAAAAAAAAAQA
SSLPGMASRGRSQTRGSRSASANANDESSRSRSRSFNLPLRGWGKGGGGG
GGVHGPDAHRIDRADTDTYRNNRVDTDIEEESIRAIGEGSRHQSSGGTPS
RGGAEEEEEQEEEVEERPGRSKSFFVGLGRWGPGRRRSESTPELSSPVAG
GGGGGVERRRRNSSSAAAAAATAANTRRNSLFSSFTGERPSVAPSVDPSP
DSNNQGAARRFGKRSPGAGKRKGLRKSQTMVDVPAGRRSPPAPEPLRSAI
GSGGKKAWGRSSRATTAATVDVEDDLEPRQQRAKSTSGGRAARTTRDKRS
SPDARSSSGRTRWVRGRQSSSRTLGAGLSSKSTPDPVVQGRTGRLPRQTV
SPTPVERLGTSVSSESSSRSAKAEKSTTGGDREHPAREDAASAERVTALL
KAEEDAEARRQLEHRIITLEMKLLVKDLVDTACVRAAERTSERSSERSST
RSNRSSLKWTPLSVSSSVAPAPLPRLSATAVQAERQSFFGNFWNGGGGKD
GGKDGGDSSNGDGGLGGGQGIGGGQTGGGVAGHWGGFDRDGARQRRNRSA
AAAVSTNGVDSKAVWKPDGTRYPASAQNQGHRGDEEENEDEGERKKEERG
EAEEEEEGFFQTLRRKLFEGDKASSDHKSASAGAAASEVKNEPPSLHLPT
PAKQTAAPVAAVGAGAAGGGSGSGSRPTRRNSTPTGTSDSRPSRSKSMAA
AAVAGPGKQRSSPAIMILPPPKPAERIPPANHPDAGAGGSRPVERSRAVT
SAAPVPPPLAPELAEEAAAKFGLVRMEVA*
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