mRNA_Ecto-sp13_S_contig15333.4010.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: D7G9G7_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G7_ECTSI) HSP 1 Score: 388 bits (997), Expect = 1.800e-132 Identity = 192/195 (98.46%), Postives = 194/195 (99.49%), Query Frame = 1
Query: 1 DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMREEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 585
DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMR+EMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKT+MDI YKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA
Sbjct: 11 DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMRKEMRAGLHVDCEACSSAGKKSADIKSRNQKKAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTKMDINYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 205
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A835YKN4_9STRA (CLU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN4_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.790e-45 Identity = 76/118 (64.41%), Postives = 93/118 (78.81%), Query Frame = 1
Query: 229 GMARVQMSDRGDNWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRG 582
G+ RV++ D GDNWN +QEA +LP T M+ TYK L VY DF AV YGRTIISE+FLH Y++S++P+ +GG AGGKK+L+RGILFKLADG+ GP+ GSDEAAAKAAGHELRG
Sbjct: 19 GLPRVKVEDLGDNWNALFQEAQALPEATEMERTYKHLLLATVYRDFTAAAVMYGRTIISEFFLHSYLRSIRPREVGGFAGGKKFLFRGILFKLADGAVGPWAGSDEAAAKAAGHELRG 136
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A7S4DG52_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG52_HETAK) HSP 1 Score: 134 bits (338), Expect = 6.230e-37 Identity = 65/107 (60.75%), Postives = 80/107 (74.77%), Query Frame = 1
Query: 259 GDNWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR 579
GD+WN+R+Q A+SLP T + K L +V DF+ TA TY +T+ISEYFL E++KSVK + GG+AGG+KY WRGILFKLADG GPY GSD AAAKA GH+LR
Sbjct: 37 GDDWNERFQHAISLPESTDEEKLLKYTLLTSVNRDFIATAETYAKTVISEYFLPEHLKSVKSGQFGGIAGGRKYCWRGILFKLADGQCGPYEGSDAAAAKAMGHDLR 143
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: D7G5G9_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G9_ECTSI) HSP 1 Score: 134 bits (338), Expect = 5.930e-33 Identity = 72/131 (54.96%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 193 KAWKDTDELLFKGMARVQMSDRGDNWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 585
++W+ EL+F + G NWN+ +Q AL LP +T K L V DF TAVTYG+TIISEYFL KS++ K LGG+AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA
Sbjct: 224 RSWERFRELVFPDDMEQAYRETG-NWNELFQSALDLPEETPDQCYRKWERLTTVNRDFKATAVTYGKTIISEYFLETEHKSIRLKELGGVAGGMKFVWRGILFKLADGSKGPYLGNDEAAAKGAGHDLRGA 353
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: D8LF64_ECTSI (Clu domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF64_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.150e-32 Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 1
Query: 265 NWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKP-KRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 585
NWN+ +Q AL LP T K + V DF AVTYG+TIISEYFL KS+KP + LGG AGG K++WRGILFKLADGS+GPY G+DEAAAK AGH+LRGA
Sbjct: 10 NWNELFQSALDLPEDTPDQCYRKWERMTTVNRDFKAAAVTYGKTIISEYFLDLKHKSIKPNENLGGSAGGMKFVWRGILFKLADGSRGPYLGNDEAAAKGAGHDLRGA 117
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A835ZAL9_9STRA (CLU domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL9_9STRA) HSP 1 Score: 113 bits (283), Expect = 8.260e-28 Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 1
Query: 295 SLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 585
++ R + K ++L A+ DF+ AVTYGRTIISEYFL E KSV P +GG+AGG+K+L RGILFKLADGS+GPY GSDEAA KA ++L+GA
Sbjct: 7 AIATACRRTLCRKYQALTALNKDFISAAVTYGRTIISEYFLKEEAKSVCPSLVGGIAGGRKFLLRGILFKLADGSRGPYDGSDEAAGKALNNDLKGA 103
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A7R9UF47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF47_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.430e-24 Identity = 54/107 (50.47%), Postives = 75/107 (70.09%), Query Frame = 1
Query: 265 NWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRGA 585
+WN+R+Q L LP+ + + ++ L A Y+DFV TA TYG +ISE FL+E +K++ + + GLAGG+KY +RGI FKLA G + PYGG AA+KA GHEL+GA
Sbjct: 29 DWNERYQAGLRLPDGSDEEQRFRLAHLTATYADFVATATTYGMVLISELFLNEELKTMSFESVPGLAGGEKYQYRGIFFKLATGHE-PYGGDYNAASKAMGHELKGA 134
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A7S0DIC4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DIC4_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 1.170e-19 Identity = 58/115 (50.43%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 265 NWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLAD----GSQG-PYGGSDEA---AAKAAGHELRGA 585
+W+ + EA LP ++ K R+L + +DF+ A YGRT ISEYFL + ++VK +LGG+AGG KYL RGILFKLA GS G YGG E AAKAAGHEL+GA
Sbjct: 156 DWSKSFLEAEDLPENNVEEVLRKYRTLTKLSTDFIEIAKAYGRTAISEYFLKDKARTVKKHKLGGVAGGDKYLVRGILFKLAVDPAMGSHGWVYGGKKENFEYAAKAAGHELKGA 270
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A2P6N2S8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2S8_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 3.600e-18 Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 265 NWNDRWQEALSLPNKTRMDITYKRRSLDAVYSDFVHTAVTYGRTIISEYFLHEYMKSVKPK-RLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELR 579
+WND +Q+ L+LP T + +K L ++ DFVH A T+G+ IISE +LH +++ P +GG+AGG+KY++ GILFK A + YGG D A KAA HEL+
Sbjct: 170 DWNDEFQKILALPENTEDEKLHKYSELSSLNKDFVHIAKTFGKIIISERYLHAKHRTINPTTEVGGVAGGEKYVYHGILFKFAIDWRNLYGG-DHNAMKAANHELQ 274
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Match: A0A2P6NJP1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NJP1_9EUKA) HSP 1 Score: 88.6 bits (218), Expect = 7.700e-17 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 265 NWNDRWQEALSLPNKTRMDITYKRRSLDAVYS----DFVHTAVTYGRTIISEYFLHEYMKSVKPKRLGGLAGGKKYLWRGILFKLADGSQGPYGGSDEAAAKAAGHELRG 582
+WN ++Q+ L N D +R ++ + S DFVH A TYG+ IISE +L + K++KP +GG AGG KY+ +GILFKLA S G YG SD AAAK AG++L+G
Sbjct: 701 SWNQQFQQILE--NLNLCDDAQERSTIYSQLSNLAQDFVHYAKTYGKLIISELYLPDDQKTIKPNDIGGFAGGVKYVVKGILFKLAVDSHGLYG-SDMAAAKVAGNDLKG 807 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15333.4010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15333.4010.1 >prot_Ecto-sp13_S_contig15333.4010.1 ID=prot_Ecto-sp13_S_contig15333.4010.1|Name=mRNA_Ecto-sp13_S_contig15333.4010.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp DHAAAVALQRAWRKRSAYVFVKDLKQEKLCRDMREEMRAGLHVDCEACSSback to top mRNA from alignment at Ecto-sp13_S_contig15333:278..3825+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15333.4010.1 ID=mRNA_Ecto-sp13_S_contig15333.4010.1|Name=mRNA_Ecto-sp13_S_contig15333.4010.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3548bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15333:278..3825+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15333:278..3825+ >mRNA_Ecto-sp13_S_contig15333.4010.1 ID=mRNA_Ecto-sp13_S_contig15333.4010.1|Name=mRNA_Ecto-sp13_S_contig15333.4010.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15333:278..3825+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |