prot_Ecto-sp13_S_contig15323.4005.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15323.4005.1
Unique Nameprot_Ecto-sp13_S_contig15323.4005.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig15323.4005.1 vs. uniprot
Match: D7FN61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN61_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.060e-186
Identity = 297/305 (97.38%), Postives = 300/305 (98.36%), Query Frame = 0
Query:    1 HGPDARLWEIDLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWKPAPMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSPGXXXXXXXXXXXXXXXXXXXXXX--VSEEEFVFVERKPEWDKVYVQQTRGGIRAGFQSDASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEELMTYTGFLAVAPKCFASFSKDNLYFEDVRRGVMARLGRLSNDELAADEEAVMAIMSSLGVVMSAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEVTIRNATR 303
            HGP+ARLWE+DLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWKPAPMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSP XXXXXXXXXXXXXXXXXXXXXX  VSEEEF+FVERKPEWDKVYVQQTRGGIRAGFQSDASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEE  TYTGFLAVAPKCFASFSKDNLYFEDVRRGVMARLGRLSNDELAADEEAVMAIMSSLGVVMSAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEVTIRNATR
Sbjct:  364 HGPEARLWEMDLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWKPAPMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSPXXXXXXXXXXXXXXXXXXXXXXXXGVSEEEFLFVERKPEWDKVYVQQTRGGIRAGFQSDASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEEFTTYTGFLAVAPKCFASFSKDNLYFEDVRRGVMARLGRLSNDELAADEEAVMAIMSSLGVVMSAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEVTIRNATR 668          
BLAST of mRNA_Ecto-sp13_S_contig15323.4005.1 vs. uniprot
Match: A0A7R9U6L2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6L2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.150e-9
Identity = 73/295 (24.75%), Postives = 120/295 (40.68%), Query Frame = 0
Query:    5 ARLWEIDLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWKPA-PMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSPGXXXXXXXXXXXXXXXXXXXXXXVSEEEFVFVERKPEWDKVYVQQTR--GGIRAGFQSDASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEELMTYTGFLAVAPKCFASFSKDNLYFEDVRRGVMARLGRLSNDELAADEEAVMAIMSSLGVVMSAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEV 296
            +R W +DLP F+E C++S   D   LP + D  + +++++   +     P+   +LQ   RL   D+ C ++Y  Y  S G  D  A                          V E +     R+    +V V      G +R GF+  ASR+ +      G  G    + S  +       +S    +    FL    K F     D L    V    +  +   SND       A+  I+  L ++++ +    N  E +E+F +  A +LI CP LN RI+GV+ ++D+I V
Sbjct:   42 SRFWVVDLPHFVEACMTSQYEDPSVLPIVMDFLRYLMDVVVDNIGNTQRPVMPEILQQFHRLCGVDQHCAYFYDRY--SKGHIDSIA------------------------EYVDEPQDYLAFRQNTGVRVLVGMMNYMGRLR-GFELIASRIGL------GSDGPSGPVCSLTEVDYYVRTISYLRTLYTKPFLKSYFKTFHEVVLDRLI--SVSDDELKSISPSSND-------AIETIVHQLEILVNDVRPDLNSEEIIEKFKMRMAKRLIICPLLNYRIKGVSHINDMISV 294          
BLAST of mRNA_Ecto-sp13_S_contig15323.4005.1 vs. uniprot
Match: A0A7S1UK73_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK73_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.340e-8
Identity = 65/300 (21.67%), Postives = 122/300 (40.67%), Query Frame = 0
Query:    2 GPDARLWEIDLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWK-PAPMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSPGXXXXXXXXXXXXXXXXXXXXXXVSEEEFVFVERKPEWDKVYVQQTRG-GIRAGFQSDASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEELMTYTGFLAVAPKCFAS-FSKDNLY-FEDVRRGVMARLGRLSNDELA-ADEEAVMAIMSSLGVVMSAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEV 296
            G     W +DLP F+E C++S+  D   LP + D  + V+++I   +     P+   +LQ   RL   D+ C ++Y  Y R         L                            ++++ V R+    K+ V      G R GF+   +R+ + N +  G                 A   S+ EL  Y   +      +A  F+K     F ++    ++ +       +    ++A+  ++S L +++  +    N  E +E+F +  A +LI CP LN RI+GV+ ++D++ +
Sbjct:   16 GSPGSFWVVDLPNFVEACMTSNFEDPGVLPLVLDALRYVMDVILDNIEDIDRPVMPEILQQFHRLSGVDQHCNYFYNRYARGHVDSIAEYLE-------------------------EPQDYLVVHRQYSNLKLLVSMMNYMGRRRGFEIIFNRIGMYNGDGSG-----------------APVCSLTELEYYIRAITYLRVLYAKPFTKKYFRTFHEILLTRLSNVSDDELKAITPGSKDAIETVVSQLEMLLRDVRQDLNAEEIIEKFKMRMAKRLIVCPLLNYRIKGVSHINDVLAI 273          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15323.4005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FN61_ECTSI1.060e-18697.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U6L2_9STRA3.150e-924.75Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1UK73_9STRA5.340e-821.67Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15323contigEcto-sp13_S_contig15323:1267..3734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15323.4005.1mRNA_Ecto-sp13_S_contig15323.4005.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15323 1267..3734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15323.4005.1 ID=prot_Ecto-sp13_S_contig15323.4005.1|Name=mRNA_Ecto-sp13_S_contig15323.4005.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
HGPDARLWEIDLPAFIERCLSSSINDLQALPFINDLFKLVLEIIAVRLWK
PAPMPRHLLQTMSRLGHGDRRCTWYYASYGRSSGTHDGPALSPGAGAGGG
GGGGAGGGGSGGGTGGVSEEEFVFVERKPEWDKVYVQQTRGGIRAGFQSD
ASRLYVANMNHFGRAGGYAAILSRIDPSRAAGPVSIEELMTYTGFLAVAP
KCFASFSKDNLYFEDVRRGVMARLGRLSNDELAADEEAVMAIMSSLGVVM
SAIDMKFNRTENLERFHVMFAIQLIRCPFLNPRIRGVTVLSDIIEVTIRN
ATR*
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