prot_Ecto-sp13_S_contig1532.4002.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1532.4002.1
Unique Name	prot_Ecto-sp13_S_contig1532.4002.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	934

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: A0A6H5K3P5_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P5_9PHAE)

HSP 1 Score: 674 bits (1738), Expect = 1.160e-232
Identity = 416/536 (77.61%), Postives = 424/536 (79.10%), Query Frame = 0

Query:  401 MQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSTMN--KASHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXX---------------AYDGRDYGGGAYSLSPSGGLTGYGMASYGYGYGGQPASPKKDGLGREKRRDRVRSGSIVSMGGGAGFGSGADPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKV------AMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEV 913
            MQSMQSPYGGYWPSGDVSGY  MSTGIST+GGGYGASDSGVRDTASTTS++N  KA+HNHS HHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXX               AYDGRDYGGG                                          VRSGSIVSMGGGAGFGSG DPQRETELSVAMENLTLEEI+GNVFRMSKDQ+   LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXX                                     ICS DEAV LVNVPLGKV      AMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP +
Sbjct:    1 MQSMQSPYGGYWPSGDVSGYGAMSTGISTFGGGYGASDSGVRDTASTTSSININKANHNHSIHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXXXXXXXXXXXXXXXXAAYDGRDYGGG------------------------------------------VRSGSIVSMGGGAGFGSGGDPQRETELSVAMENLTLEEIDGNVFRMSKDQVSV-LLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGICSHDEAVALVNVPLGKVGNEKMVAMLSMQKFSSNVIEKCMDRASEEIIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPSI 493

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: D8LGB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB4_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 4.440e-203
Identity = 407/521 (78.12%), Postives = 415/521 (79.65%), Query Frame = 0

Query:    1 MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGIQIDGGVAGQQPNPNSNNYFGYGPSGGLALDVDGSGNAGAGGAPTQGVAAPSSTAGGSXXXXXXXXXXXXXXXXXXXXXTDGSGVSRRFGVPIASSSRNVGAGXXXXXXXXXX---VSGLAGAGVAFGDDRRRAGGAAGGSMGGRXXXXXXXSGMGGVXXXXXXRASGVRGGYESAAAAAASPVRGPVDHSQLQQALSHMGYGGSSGGNDTMSPTSATGMGGQAQQQPGLYSTGSNGSN---HSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMNHPQNVAAAGGGYPSSPGHSASYGMQPSQQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTMQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTSTMNKASHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPXXXXXXXXX--AYDGRDYGGG 513
            MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKA+GV+AIQGKLAGIQIDGGVAGQQ NPNSNNYFGYGPSGGLALDVDG                        XXXXXXXXXXXXXXXXXX   TDGSGVSRRFGVPIAS        XXXXXXXXXX   VSGL G GVAFGDDRRRAGGA    +GGR   X   SGM   XXXXXX     RGGYESAAAAAASPVRGPVDHSQLQ ALSHMGYG                                       HSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHM+HPQNVAAAGGGYPSSPGHSASYGMQP+QQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPT+QSMQSPYGGYWPSGDVSGYSGMSTGIS YGGGYGASDSGVRDTASTTS++NK SHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGG RQHQ  XXXXXXXXX  AYDGRDYGGG
Sbjct:    1 MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKADGVNAIQGKLAGIQIDGGVAGQQTNPNSNNYFGYGPSGGLALDVDGXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTTDGSGVSRRFGVPIASXXXXXXXXXXXXXXXXXXXXXVSGLTGPGVAFGDDRRRAGGAXXXXVGGRRAAXGSGSGMXXXXXXXXXXXXXXRGGYESAAAAAASPVRGPVDHSQLQ-ALSHMGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGGMGQPVGLNIHHDPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMSHPQNVAAAGGGYPSSPGHSASYGMQPNQQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPTLQSMQSPYGGYWPSGDVSGYSGMSTGISAYGGGYGASDSGVRDTASTTSSINKTSHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGTRQHQHQXXXXXXXXXXAAYDGRDYGGG 517

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: D8LGB5_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB5_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 3.540e-131
Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0

Query:  528 MASYGYGYGGQPASPKKDGLGREKRRDRVRSGSIVSMGGGAGFGSGADPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 735
            MASYGYGYGG PASPK DGLGREKRRDRVRSGSIVSM GGAGFGSG +PQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDP+FVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF
Sbjct:    1 MASYGYGYGGHPASPKMDGLGREKRRDRVRSGSIVSMAGGAGFGSGGEPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPMFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAF 208

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: A0A4D9CTA7_9STRA (PUM-HD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTA7_9STRA)

HSP 1 Score: 252 bits (643), Expect = 5.320e-66
Identity = 181/349 (51.86%), Postives = 239/349 (68.48%), Query Frame = 0

Query:  577 QRETELSVAMENLT--LEEI--EGNVFRMSKDQIGCRLLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDVPA 921
            +R+ ++  A+ + T  LEEI     V  +S+DQ+GCR LQLKLD+      + I  +A+P ++EMM DPFGNYLFQKI DK  E  R  +++ V  ++V   +NLHGTRSVQ+I+EVC+ T  QVA + +AL+   V LC+D NGNHVVQR LQHL   D AF                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C+ DE   + + PLG++  LS+QK+SSNV+EKC+++ASE++   Y+ E+  P  ++ L+QDQYANYV+Q+ L +A     L LVE++R HL  MRN++GGRR+L++I+KRFP V L  D+ A
Sbjct:  792 ERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGADAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCK-TKDQVATITAALRHDVVRLCVDANGNHVVQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMA 1139

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: D8LGB6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGB6_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.650e-62
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0

Query:  799 ICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLD 916
            ICSRDEAVTLVNVP+GKVAMLSMQKFSSNVIEKCMDRASEE+IVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP    D
Sbjct:   61 ICSRDEAVTLVNVPIGKVAMLSMQKFSSNVIEKCMDRASEEMIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPVARKD 178

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 8.610e-61
Identity = 143/358 (39.94%), Postives = 189/358 (52.79%), Query Frame = 0

Query:  578 RETELSVAMENL--TLEEIEGNVFRMSKDQIGCRLLQLKLDQ--------------GDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 919
            RE++++  +E     L+++ G V+ MS+DQ+GCRLLQ KLD+               +   VS I  EA P LS MM DPFGNYLFQK+  KVD+  R   V  V  +M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N F                                                                CSR+E   L + PLG VA LS QKFSSNV+E C++RA  EV  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  366 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 722

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 225 bits (574), Expect = 1.400e-60
Identity = 143/383 (37.34%), Postives = 196/383 (51.17%), Query Frame = 0

Query:  571 GSGADPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLD---QGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVC-------------------------------RGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 919
            GS  DP   + LS A   L++++I+  VF MSKDQ GCRLLQ +LD   +GD   V  I  E+  +L+EMM DPFGNYLFQK+ ++V E  R  ++ +V+  +V A +NLHGTRSVQK++EVC                               R T S   ++V ALKD  V LC+D+NGNHV+QR LQ + P  N F                                                                C+ +EA  ++  PLG +  LS+QKFSSNVIEKC+++A E V  KY+ E+     M  +LQDQ+ANYV+Q+ L +   +  L LV++IR HL  M+N+SGGRR+  RI KRFP + +  D+
Sbjct:   66 GSATDP---SSLSAA---LSVDDIQNRVFAMSKDQNGCRLLQEQLDYEDRGDLCDV--IYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKNTSGGRRITARILKRFPNMDISMDM 440

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 3.350e-60
Identity = 133/336 (39.58%), Postives = 182/336 (54.17%), Query Frame = 0

Query:  589 LTLEEIEGNVFRMSKDQIGCRLLQLKLD-QGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFP---EVSLDEDVP 920
            L +E+++G V+ MSKDQ GCRLLQ +LD  G P     I  EA P+L +MM DPFGNYLFQK+ ++V +D R ++V +V+  +V A +NLHGTRSVQK++EVC    +   ++V AL+   V LC+D+NGNHV+QR LQ L    N F                                                                C  DE V L+    G V  LS+QKFSSNV+EKC++ A  E+   +V E+     M  +LQDQ+ANYV+Q+ L +A  +  L LV +I+ HL  M+N+SGGRR+  RI KRFP   E+++D D P
Sbjct:  253 LAVEDLQGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFPHMVEMAMDLDPP 588

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: K3W6G7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6G7_GLOUD)

HSP 1 Score: 233 bits (594), Expect = 5.330e-60
Identity = 145/392 (36.99%), Postives = 202/392 (51.53%), Query Frame = 0

Query:  556 VRSGSIVSMGGGAGFGSGADPQRETELSVAMENLTLEEIEGNVFRMSKDQIGCRLLQLKLDQGDPVFVSKIC-GEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVC---------------------------RGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 919
            V S     +GG +G G    P   + LS A   L++E+I+G VF MSKDQ GCRLLQ +LD  D   + ++   E+  +L+EMM DPFGNYLFQK+ ++V E  R  ++ +V+  +V A +NLHGTRSVQK++EVC                           R T +   ++V ALKD  V LC+D+NGNHV+QR LQ + P  N F                                                                C+ +EA  ++  PLG +  LS+QKFSSNVIEKC+++A E V   Y+ EL +   M  +LQDQ+ANYV+Q+ L +   +  L LV+SIR HL +M+N+SGGRR+  RI KRFP + +  D+
Sbjct:  586 VSSAQSSGLGGISGSGL-LTPSDPSGLSAA---LSVEDIQGRVFAMSKDQNGCRLLQEQLDYEDRKDLCEVIYQESLDHLAEMMVDPFGNYLFQKLLERVSEKKRLAIIRRVSSNLVAAALNLHGTRSVQKVVEVCATSAEVIEDGMYDDLDDDAGERRPNGVRRTVNLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKQQKAEVIAQVEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNIFELSIQKFSSNVIEKCLEKAPERVRQNYIKELINCPKMNKMLQDQFANYVVQRALCVCSEEQCLQLVKSIRPHLAMMKNTSGGRRITARILKRFPNMDISLDM 973

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BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 9.000e-60
Identity = 144/358 (40.22%), Postives = 190/358 (53.07%), Query Frame = 0

Query:  578 RETELSVAMENL--TLEEIEGNVFRMSKDQIGCRLLQLKLDQ--------------GDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKIADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVVVSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICSRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELADPAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGRRMLTRISKRFPEVSLDEDV 919
            RE++++  +E     L+++ G V+ MS+DQ+GCRLLQ KLD+               +   VS I  EA P LS MM DPFGNYLFQK+  KVD+  R   V  VA +M EA +NLHGTR VQK++E+CR T +Q AV+  +L  + V L LD NGNHVVQR LQH+    N F                                                                CSR+E   L + PLG VA LS QKFSSNV+E C++RA  EV  K+V ELA    +R L+ DQYANYV+Q+ L +A  +  L LV +IR HL  M+++S GRR+  +I KR+P V L E++
Sbjct:  754 RESDMAALLEATRPALKDVLGKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEASEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVADRMPEAAVNLHGTRCVQKVVELCR-TDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEI 1110

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1532.4002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K3P5_9PHAE	1.160e-232	77.61	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
D8LGB4_ECTSI	4.440e-203	78.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LGB5_ECTSI	3.540e-131	97.12	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A4D9CTA7_9STRA	5.320e-66	51.86	PUM-HD domain-containing protein n=2 Tax=Monodopsi...	[more]
D8LGB6_ECTSI	3.650e-62	94.92	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
D7FSX6_ECTSI	8.610e-61	39.94	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A833SFT8_PHYIN	1.400e-60	37.34	Pumilio-family RNA binding repeat domain-containin...	[more]
A0A1V9YPP5_9STRA	3.350e-60	39.58	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
K3W6G7_GLOUD	5.330e-60	36.99	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A6H5JG61_9PHAE	9.000e-60	40.22	PUM-HD domain-containing protein n=1 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 665..702 e-value: 170.0 score: 3.4 coord: 849..884 e-value: 1.6 score: 17.8 coord: 593..628 e-value: 0.034 score: 23.3 coord: 703..738 e-value: 1.4E-4 score: 31.3 coord: 739..774 e-value: 0.0081 score: 25.4 coord: 811..846 e-value: 37.0 score: 8.5 coord: 775..810 e-value: 6.4E-5 score: 32.3 coord: 629..664 e-value: 0.039 score: 23.1
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 744..772 e-value: 2.0E-4 score: 20.8 coord: 776..802 e-value: 1.7E-6 score: 27.4 coord: 704..732 e-value: 2.6E-5 score: 23.7
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 847..884 score: 9.061
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 593..628 score: 6.914
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 629..664 score: 8.617
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 775..810 score: 10.39
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 703..726 score: 6.867
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 811..846 score: 6.214
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 738..774 score: 9.201
IPR001313	Pumilio RNA-binding repeat	PROSITE	PS50302	PUM	coord: 665..702 score: 6.937
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 577..914 e-value: 7.6E-103 score: 346.1
None	No IPR available	PANTHER	PTHR12537:SF13	PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4	coord: 256..903
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 256..903
IPR033133	Pumilio homology domain	PROSITE	PS50303	PUM_HD	coord: 572..910 score: 85.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 585..907

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1532	contig	Ecto-sp13_S_contig1532:781..14622 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1532.4002.1	mRNA_Ecto-sp13_S_contig1532.4002.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1532 248..14622 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1532.4002.1 ID=prot_Ecto-sp13_S_contig1532.4002.1|Name=mRNA_Ecto-sp13_S_contig1532.4002.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=934bp
MVLSADAESDMSKNVSVATGGIAATGGGGGAPAGPKAEGVDAIQGKLAGI
QIDGGVAGQQPNPNSNNYFGYGPSGGLALDVDGSGNAGAGGAPTQGVAAP
SSTAGGSVGGTAGGGGGGIGGGHTPGGTTDGSGVSRRFGVPIASSSRNVG
AGGNNRGGGGGGVSGLAGAGVAFGDDRRRAGGAAGGSMGGRRAGGGSGSG
MGGVGRGSGSRASGVRGGYESAAAAAASPVRGPVDHSQLQQALSHMGYGG
SSGGNDTMSPTSATGMGGQAQQQPGLYSTGSNGSNHSGGMGQPVGLNIHH
DPSQQAAMMGQIQTGMYYGAAAGYGAQAPGTPVLAHMNHPQNVAAAGGGY
PSSPGHSASYGMQPSQQMGAIEMQQGMPSGYPVGAGGMVHSMGVVPGTPT
MQSMQSPYGGYWPSGDVSGYSGMSTGISTYGGGYGASDSGVRDTASTTST
MNKASHNHSTHHYLASPGGSVAGPPSGQRAVGDQYGGARQHQQPQHQQQQ
HQAAYDGRDYGGGAYSLSPSGGLTGYGMASYGYGYGGQPASPKKDGLGRE
KRRDRVRSGSIVSMGGGAGFGSGADPQRETELSVAMENLTLEEIEGNVFR
MSKDQIGCRLLQLKLDQGDPVFVSKICGEAQPYLSEMMKDPFGNYLFQKI
ADKVDEDGRTDLVNQVAGQMVEAGMNLHGTRSVQKIIEVCRGTPSQVAVV
VSALKDATVPLCLDTNGNHVVQRLLQHLAPTDNAFVFEMLAEACVPVATH
RHGCCVIQRAIDAATVEQSRLLVSQVSKHALQLMQDPYGNYVVQYVLGIC
SRDEAVTLVNVPLGKVAMLSMQKFSSNVIEKCMDRASEEVIVKYVHELAD
PAAMRPLLQDQYANYVIQKTLQLAPRDAALTLVESIREHLVLMRNSSGGR
RMLTRISKRFPEVSLDEDVPAIAVVRAPAGVEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR033133	PUM-HD
IPR016024	ARM-type_fold