mRNA_Ecto-sp13_S_contig15318.4001.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A6H5JTW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTW0_9PHAE) HSP 1 Score: 586 bits (1511), Expect = 2.060e-208 Identity = 331/385 (85.97%), Postives = 339/385 (88.05%), Query Frame = 1
Query: 4 GGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRIDAVEWRGNETSLERLSESQERXXXXXXXXXXXXR----GRQRLSRENESILEARPLSPSRVRVRKLDWTAYDHDATEEREEGGEGIRGWWWDDPGPGDDRPGRKQEGRGGAEKRAATTTRPSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTRQARGPLCVVCLR*PGFDDFLHRLGSCGLRYRLRRMSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRDGGTGVDGGGSPSRXXXXXXXXXXXXXXSTCTRFDEFVMCEIFRAAEEQQQRRNS 1146
GGDIW AALLLSAWLLENPQLVQGT VLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINR PRI AVEWRGNETS SESQE XXXXXXXXXXXX GRQR SRE +S+LE RPLSPSRVRVRKLDWTAYDH+ATEE EEGGEG+RG WWDDPGPGDDRPG KQE RGGAEKRA TTT PSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFA+GGCRAGYILQLSTRQARGPLC+V LR PGFDDFLHRLGSCGLRYRLRRMSD+LPGDLLEEI RSASIDIVGGPVASSRTPSCV+AARD VGG KED GGTGVDGG SPSR STCTRFDEFVMCEIFRA EEQQQRRNS
Sbjct: 17 GGDIWCAALLLSAWLLENPQLVQGTTVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRAPRIVAVEWRGNETSQGAPSESQEXXXXXXXXXXXXXXXXXXGRQRPSRE-KSLLEVRPLSPSRVRVRKLDWTAYDHEATEEWEEGGEGLRGCWWDDPGPGDDRPG-KQEDRGGAEKRATTTTTPSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFASGGCRAGYILQLSTRQARGPLCLVSLR-PGFDDFLHRLGSCGLRYRLRRMSDILPGDLLEEIRRSASIDIVGGPVASSRTPSCVNAARDSVGGAKEDCGGGTGVDGGESPSRSVVAAATADAAA--STCTRFDEFVMCEIFRATEEQQQRRNS 396
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: D8LM85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM85_ECTSI) HSP 1 Score: 543 bits (1400), Expect = 1.710e-191 Identity = 314/382 (82.20%), Postives = 322/382 (84.29%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRIDAVEWRGNETSLERLSESQERXXXXXXXXXXXXRGRQRLSRENESILEARPLSPSRVRVRKLDWTAYDHDATEEREEGGEGIRGWWWDDPGPGDDRPGRKQEGRGGAEKRAATTTRPSTPEDAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTRQARGPLCVVCLR*PGFDDFLHRLGSCGLRYRLRRMSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRDGGTGVDGGGSPSRXXXXXXXXXXXXXXSTCTRFDEFVMCEIFRAAEEQQQRRNS 1146
VGGDIW AALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN TPRIDAVE RGN TSLE SESQE XXXXXXXXXXXX GRQRL RENES+LE RPLSPSRVRVRKLDWTAYDHDATE EEGGEG+RGWWWDDPG G DR RA TTT PSTP+DAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR PGFDDFLHRLGSCGLRYRLRRMSD+LPGDLLEEIH+SASIDIVGGPV SSRTP CVDAARD VGGG+ED DGG GVD G SPS XXXXXX TCTRFDEFVMCEIFRA EEQQ+R+NS
Sbjct: 33 VGGDIWCAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINHTPRIDAVECRGNGTSLEPPSESQEXXXXXXXXXXXXXXGRQRLGRENESLLEVRPLSPSRVRVRKLDWTAYDHDATEAWEEGGEGLRGWWWDDPGRGGDRX-XXXXXXXXXXXRATTTTTPSTPQDAGATLRCDVAIGSALVYSPHHACVADVLSRAFAAGGCRAGYILQLSTR-------------PGFDDFLHRLGSCGLRYRLRRMSDILPGDLLEEIHQSASIDIVGGPVTSSRTPLCVDAARDSVGGGEEDCDGGKGVDAGKSPS--GSVIAAXXXXXXAGTCTRFDEFVMCEIFRATEEQQRRQNS 398
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: F0ZXQ6_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZXQ6_DICPU) HSP 1 Score: 79.7 bits (195), Expect = 3.090e-13 Identity = 35/69 (50.72%), Postives = 53/69 (76.81%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 207
+G IW AA++LS W+ +N +G VLELGSG+GL GI++ Y +K+VTLTDY++ L+ NL++NV++N
Sbjct: 58 IGCSIWDAAIILSRWIYKNQNAFEGQSVLELGSGVGLPGILSAYYAKNVTLTDYLNPLVENLKYNVELN 126
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: F4QEN1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QEN1_CAVFA) HSP 1 Score: 78.6 bits (192), Expect = 6.460e-13 Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRID 225
+G IW AA++ S W+ +N Q+ G +VLELGSG+GL GI+A Y + VTL+DY+ L+ NL++NVD+N + D
Sbjct: 58 IGCAIWDAAIIFSRWVYKNTQVFDGQKVLELGSGVGLPGILASYYAAHVTLSDYLPPLIENLQYNVDLNAKQKND 132
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A151ZAM5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZAM5_9MYCE) HSP 1 Score: 78.2 bits (191), Expect = 1.090e-12 Identity = 38/92 (41.30%), Postives = 60/92 (65.22%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTPRIDAVEWRGNETSLERLSES 276
+G IW AA++LS W+ +P+ VLELGSG+GL GI++ Y + VTLTDY++ L+ NL++NVD+N +D + +E ++ L +S
Sbjct: 58 IGCAIWDAAIILSRWIYAHPEAFTNKSVLELGSGVGLPGILSSYYANDVTLTDYLEPLIDNLKYNVDLNARQGLDIDSDQEDEETISNLIKS 149
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A4Z1SZ50_GIAMU (Methyltransferase n=1 Tax=Giardia muris TaxID=5742 RepID=A0A4Z1SZ50_GIAMU) HSP 1 Score: 77.4 bits (189), Expect = 3.500e-12 Identity = 34/69 (49.28%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 207
VG +W AA+++S +L+ +P+++QG RVLELGSG+GL G++A S V LTDY + +L NLE+N+ +N
Sbjct: 53 VGCGVWDAAIIMSRYLITHPEVLQGKRVLELGSGVGLTGLIASRFSDEVVLTDYSESILENLEYNIWLN 121
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: D3B3S1_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B3S1_POLPP) HSP 1 Score: 75.9 bits (185), Expect = 6.450e-12 Identity = 33/69 (47.83%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 207
+G IW AA+++S W+ ++ G + LELGSG+GL GI+A + +S+TLTDY+ LL NL++NVD+N
Sbjct: 58 IGCAIWDAAIIMSRWIFKHQDAFSGQKCLELGSGVGLTGILAAHFCQSITLTDYLPPLLENLKYNVDLN 126
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A1V9YSW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YSW7_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.740e-12 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 13 IWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDINRTP---RIDAVEWRGNETSLERL 267
+W AA++L+ W+ N QL G VLE+GSGLGLCGIVA S +TLTDY + L L++NV++N T ++ ++W ++ +L ++
Sbjct: 146 LWGAAVILARWIHLNRQLFHGQTVLEVGSGLGLCGIVAAAYSDQITLTDYQQDTLDALQYNVNLNTTSSSVHVEHLDWDNHDLTLPKV 233
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A2R6XER1_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XER1_MARPO) HSP 1 Score: 76.3 bits (186), Expect = 1.580e-11 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKS-VTLTDYVDELLVNLEHNVDINRTPR 219
VG +W ALLLS L+E P LV+ RVLELGSG GLCG++A L S V LTDY+ LL+NL NV + R R
Sbjct: 134 VGWKVWGGALLLSLRLIEIPSLVKNKRVLELGSGCGLCGLLASKLGASEVVLTDYLPSLLLNLRRNVSLFRNQR 207
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Match: A0A8J4VA45_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4VA45_9MYCE) HSP 1 Score: 74.3 bits (181), Expect = 2.210e-11 Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 1 VGGDIWWAALLLSAWLLENPQLVQGTRVLELGSGLGLCGIVAGYLSKSVTLTDYVDELLVNLEHNVDIN 207
+G IW AA+++S W+ +N + VLELGSG+GL GI++ Y +K VTLTDY+ L+ NL +N+++N
Sbjct: 58 IGCSIWDAAIIISRWIFKNNTVFNNQTVLELGSGVGLPGILSAYYAKHVTLTDYLPPLIENLNYNIELN 126 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15318.4001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15318.4001.1 >prot_Ecto-sp13_S_contig15318.4001.1 ID=prot_Ecto-sp13_S_contig15318.4001.1|Name=mRNA_Ecto-sp13_S_contig15318.4001.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp MSDVLPGDLLEEIHRSASIDIVGGPVASSRTPSCVDAARDGVGGGKEDRDback to top mRNA from alignment at Ecto-sp13_S_contig15318:543..3159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15318.4001.1 ID=mRNA_Ecto-sp13_S_contig15318.4001.1|Name=mRNA_Ecto-sp13_S_contig15318.4001.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2617bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15318:543..3159+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15318:543..3159+ >mRNA_Ecto-sp13_S_contig15318.4001.1 ID=mRNA_Ecto-sp13_S_contig15318.4001.1|Name=mRNA_Ecto-sp13_S_contig15318.4001.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15318:543..3159+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |