mRNA_Ecto-sp13_S_contig15310.3993.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: D7FL81_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL81_ECTSI) HSP 1 Score: 291 bits (746), Expect = 3.020e-98 Identity = 162/202 (80.20%), Postives = 169/202 (83.66%), Query Frame = 1
Query: 1 MDCAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFVG--------RVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEE---VRSLGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSPPSPAPTLXXXXXXXXASIVSDDYEVIGCVADSQAARVMPVGPLAEATMSAEVG 573
MDCA N ETCGGFDALTLYEI SEAP TPAP TPPG XX SPVV SGDYDFVG RVMPVGPLAEDVMSAEICFGICSAQD+S THFGT+YGEE SLGTTETS+ACTMDCA N+ ETCGGFDALS Y+IVAD SPP+PAPTL XXXXXXASIVSDDYEVIGCVAD+QAARVMPVGPLAE TMSAEVG
Sbjct: 1 MDCAGNTAETCGGFDALTLYEIASEAPPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLAEDVMSAEICFGICSAQDDSNTHFGTQYGEECWCTGSLGTTETSSACTMDCAGNSAETCGGFDALSMYEIVADTSSPPTPAPTLPVXXXXXXASIVSDDYEVIGCVADNQAARVMPVGPLAEDTMSAEVG 202
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 253 bits (645), Expect = 1.660e-77 Identity = 136/189 (71.96%), Postives = 142/189 (75.13%), Query Frame = 1
Query: 7 CAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFV--------GRVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEEVRS--------LGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSPPSPAPTLXXXXXXXXASIVSDDYEVIGCVADSQAARV 525
CA NA ETCGGFDALTLYEI+SEAP TPAP TPPGP APASPVV SGDYDFV RVMPVGPLAE VMSAEICFGICSAQD+SYTHFGT+YGEE S T ETSTAC CA N E CGGFDALS Y+IVADIPSPP+ APTL ASIVSDDYEVIGCVAD+QAARV
Sbjct: 422 CAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGPMPAPASPVVPSGDYDFVDCVADSQSSRVMPVGPLAEAVMSAEICFGICSAQDDSYTHFGTQYGEEDLSGQPRPPPTAPTXETSTACVYPCAGNPEEICGGFDALSVYEIVADIPSPPTTAPTLPAPRTPAPASIVSDDYEVIGCVADNQAARV 610
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: D7G5F7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F7_ECTSI) HSP 1 Score: 167 bits (423), Expect = 4.740e-48 Identity = 105/202 (51.98%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 7 CAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFVG--------RVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEE---VRSLGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSPPSPAPTLXXXXXXXXASIV--SDDYEVIGCVADSQAARVMPVGPLAEATMSAEVG 573
C+ ++R CG D +++Y + ST G + PV + +F+G RVM GP++ D MSAEIC GICS D SYTHFGT+YG E SLG+TETSTACTMDCA N ETCGGFDAL+ Y+IV++ +PP+PAP XXXXX S V S DY+ +GCVADSQ++RVMPVGPL E MSAEVG
Sbjct: 89 CSGDSRVLCGTDDHISVYSLDG--------STGGGDDDSGDPPVGS----EFIGCVADSQDDRVMAEGPMSADTMSAEICLGICSGMDASYTHFGTQYGNECWCTGSLGSTETSTACTMDCAGNTAETCGGFDALTLYEIVSE--APPTPAPFTPPGXXXXXXSPVVPSGDYDFVGCVADSQSSRVMPVGPLTEDVMSAEVG 276
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5JNN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN6_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.510e-26 Identity = 90/202 (44.55%), Postives = 115/202 (56.93%), Query Frame = 1
Query: 4 DCAENARETCGGFDALTLYEIVSEAPLTPAPST-PPGPXXAPASPVVTSGDYDFVG--------RVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEEVRSLGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSPPSPAPTLXXXXXXXXAS-----IVSDDYEVIGCVADSQAARVMPVGPLAEATMSAE 567
DCA NA E C GF+A+++YEI S +T +P+ P XX VV S D + VG RVMPVGPL+ + M+AE ++ SLG T++STAC DCA N E C GF+A+S Y+I A + + P+ PT XXXXXXXX + SDDYE+IG VAD ARVMPVGPL+ M+AE
Sbjct: 332 DCAGNAEEICSGFNAMSVYEIAS---VTTSPTDYPTXXXXXXXXXVVPSDDSELVGCVADFNGARVMPVGPLSSNAMTAE--------------------DDDGGSLGATQSSTACDYDCAGNADEICSGFNAMSVYEI-ASVTTSPADDPTXXXXXXXXXXXXXXXVVPSDDYELIGYVADFNGARVMPVGPLSSNAMTAE 509
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.030e-23 Identity = 62/127 (48.82%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 7 CAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFVGRVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEE---VRSLGTTETSTACTMDCAENNTETCGGFDAL 378
C+ ++R CG D +++Y + S P P + V D RVM GP++ MSAEIC GICS D+SYTHFGT+YGEE SLGTTETSTACT CA N ETCGGFDAL
Sbjct: 314 CSGDSRVLCGTDDHISVYSLDGSTGGGDDDSGDP-PVGSELIGCVADSQDD---RVMSEGPMSAATMSAEICLGICSEMDSSYTHFGTQYGEECWCTGSLGTTETSTACTYPCAGNAGETCGGFDAL 436
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5KQ76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ76_9PHAE) HSP 1 Score: 100 bits (250), Expect = 2.240e-21 Identity = 61/152 (40.13%), Postives = 73/152 (48.03%), Query Frame = 1
Query: 148 GDYDFVG--------RVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEE---VRSLGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSPPSPAPTLXXXXXXXXASIVSDDYEVIGCVADSQAARVMPVGPLAEATMSAEV 570
GDY+ +G RVM VGP+ D MSAEICF IC + THFGT+YG E LG + ST CT DC N ETCGGFD ++ Y I PS D Y IGC+AD R+M + MSAE+
Sbjct: 304 GDYELIGCRVDDREARVMSVGPIEGDAMSAEICFDICRELHPTSTHFGTQYGNECFCTDVLGESAVSTDCTYDCIGNPDETCGGFDRITAYRIAGSEPS-------------------AGDGYVSIGCLADKNGDRIMDRRMVTSIPMSAEI 436
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 83.6 bits (205), Expect = 2.210e-15 Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 1
Query: 7 CAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFVGRV 174
CA NA ETCGGFDALTLYEI+SEAP TPAP TPPG XX PVV SGDYDFV V
Sbjct: 407 CAGNAGETCGGFDALTLYEIISEAPPTPAPLTPPGXXXXXXXPVVPSGDYDFVDCV 462
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5K223_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K223_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 8.260e-14 Identity = 48/139 (34.53%), Postives = 68/139 (48.92%), Query Frame = 1
Query: 7 CAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPXXAPASPVVTSGDYDFVG--------RVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEEV----RSLGTTETSTACTMDCAENNTETCGGFDALSGY 387
C+ +A ETCGGF+A+++Y S+ TP P V+ D ++G R+ PV A DVM+ C C+ Y ++GT+YGEE T ST C DC+ + ETCGGF+A+S Y
Sbjct: 42 CSGDAGETCGGFNAMSVYSTGSDPVETPTPVA-----------VIEPTDPTYLGCYVDSQTDRIFPV-TTASDVMTLAFCADFCA----EYAYYGTQYGEECWCGNSGYDTLGESTDCNYDCSGDADETCGGFNAMSVY 164
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A6H5KH26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH26_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 2.280e-12 Identity = 51/82 (62.20%), Postives = 55/82 (67.07%), Query Frame = 1
Query: 292 SLGTTETSTACTMDCAENNTETCGGFDALSGYDIVADIPSP---PSPAP-TLXXXXXXXXASIVSDDYEVIGCVADSQAARV 525
SLGTTETSTACT CA N ETCGGFDALS Y IV+ P P+PAP T XXXXX I S D+E+IGCVAD Q V
Sbjct: 11 SLGTTETSTACTYPCAGNPGETCGGFDALSLYKIVSVTTPPTDDPTPAPLTXXXXXXTAEPVIPSGDFELIGCVADDQGNNV 92
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Match: A0A8E2E8P2_9PEZI (WSC-domain-containing protein n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2E8P2_9PEZI) HSP 1 Score: 70.1 bits (170), Expect = 1.330e-10 Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 1
Query: 1 MDCAENARETCGGFDALTLYEIVSE--APLTPAPSTPPGPXXAPASPVVTS--------GDYDFV--GRVMPVGPLAEDVMSAEICFGICSAQDNSYTHFGTKYGEE------VRSLGTTETSTACTMDCAENNTETCGGFDALSGYDI 393
M CA N+ ETCGG D L ++ + + T A ++ P PVV + G Y+ V GR + V +A + M+ E+C CS T+FG +YG E + S T C+M CA N E CGG LS Y +
Sbjct: 1249 MPCAGNSAETCGGSDFLNMWYTNNTVTSTFTTATASTTAPITTMTGPVVVASVGNYLSIGCYNEVPNGRALTVKSVANNSMTVELCAAFCSGT----TYFGVEYGAECYCGNTIPSTSALVTDGRCSMTCANNTKEICGGPSGLSMYQV 1393 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15310.3993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15310.3993.1 >prot_Ecto-sp13_S_contig15310.3993.1 ID=prot_Ecto-sp13_S_contig15310.3993.1|Name=mRNA_Ecto-sp13_S_contig15310.3993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp MDCAENARETCGGFDALTLYEIVSEAPLTPAPSTPPGPTPAPASPVVTSGback to top mRNA from alignment at Ecto-sp13_S_contig15310:908..3020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15310.3993.1 ID=mRNA_Ecto-sp13_S_contig15310.3993.1|Name=mRNA_Ecto-sp13_S_contig15310.3993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2113bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15310:908..3020+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15310:908..3020+ >mRNA_Ecto-sp13_S_contig15310.3993.1 ID=mRNA_Ecto-sp13_S_contig15310.3993.1|Name=mRNA_Ecto-sp13_S_contig15310.3993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=573bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15310:908..3020+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |