mRNA_Ecto-sp13_S_contig15309.3991.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15309.3991.1
Unique NamemRNA_Ecto-sp13_S_contig15309.3991.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: D8LQV5_ECTSI (Acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV5_ECTSI)

HSP 1 Score: 484 bits (1246), Expect = 1.330e-167
Identity = 240/253 (94.86%), Postives = 249/253 (98.42%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHGKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRPQ 759
            WWVRNVGTVPIQRRSDHGK+TDN+QAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRI+LEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYP L+AGQGGESAAV+KIMEQVADQLRQDLVTSPDWDSLVAGHAARCL+APLGTWISLHQTVAL+QRWVKVLSVVTEQER+ER LTRTASEPDI MLRDREATDAECA+IGQLKRDLLAYDAE RGLGLSDRRLRRPQ
Sbjct:   88 WWVRNVGTVPIQRRSDHGKSTDNTQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIILEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPGLIAGQGGESAAVDKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLYAPLGTWISLHQTVALTQRWVKVLSVVTEQEREERNLTRTASEPDIHMLRDREATDAECAEIGQLKRDLLAYDAEHRGLGLSDRRLRRPQ 340          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A836CLQ0_9STRA (Acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLQ0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.730e-63
Identity = 118/244 (48.36%), Postives = 154/244 (63.11%), Query Frame = 1
Query:    7 VRNVGTVPIQRRSDHGKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSD 738
            V  VGTVPIQRR ++G   DN +AMAKL+EAL+ G  VC+FPEG SRYQSGLAPL+ GVG I LE L+R  +AG +DFT  V+ C +TY HREKFRSD+ V F     L+A   P LV G  GE  A   I++ VA  LR+ +V++P+W ++ A  AA  LHAP+G  I+L Q   L+Q +V+VLS  T     +R+L R AS+PDI  ++D E +  +  +   L   LLAY       GL D
Sbjct:   20 VGGVGTVPIQRRDEYGSAADNKKAMAKLHEALEDGACVCLFPEGQSRYQSGLAPLKTGVGYIALETLRRALDAGKEDFTVTVIACGITYTHREKFRSDVCVVFETAARLRAGSLPELVGGPNGEKGAARAIVDSVAALLRRSVVSAPEWATVRAALAAVRLHAPVGARIALAQHARLTQSFVQVLSACTPASLAQRRLVRLASDPDIP-VQDPEPSSTQEERAAALLSQLLAYQDALDAAGLPD 262          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A1B7N5L5_9AGAM (PlsC domain-containing protein n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7N5L5_9AGAM)

HSP 1 Score: 156 bits (394), Expect = 9.770e-41
Identity = 97/254 (38.19%), Postives = 144/254 (56.69%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSD-HGKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAG-QGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRP 756
            W V + GTVPI+RR D +G   DNSQAM KL EAL+ GD VC+FPEG SRY   +APL+ GV RI+ +VL R  +  N  F+  ++TC++TY+HR+ FRSD+ V F  P++    + P L+A  Q  E  AV   M+Q   Q+    + SP W+ + +   A  ++APLGT +SL   V +++ +V+      + ++ ER    +A +  +   R       E A+  QL+RDL  Y  +    G+ D R+  P
Sbjct:   89 WLVESAGTVPIKRRKDFNGNQVDNSQAMDKLMEALELGDAVCLFPEGASRYHPTIAPLKTGVARILSDVLSRNRDDPN--FSVSILTCSVTYMHRQHFRSDVLVTFNPPMTFTPKDNPELLAPVQYEEIKAVTARMQQ---QISSRTIDSPSWEIVRSAKMATRIYAPLGTLMSLGDYVRVTRTFVEAFKASDDSQKSER----SAEDQSVDFTR-------EDAEFSQLRRDLKDYQDQLVYWGIKDDRITHP 326          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: W4K4V0_HETIT (PlsC domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K4V0_HETIT)

HSP 1 Score: 155 bits (392), Expect = 2.080e-40
Identity = 95/253 (37.55%), Postives = 139/253 (54.94%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHGKNT-DNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRP 756
            W + + GTVPIQRR D    T DNSQ M KL EAL+ GD VC+FPEG SRY   +APL+ GV RIV + L +  +  N DF   V+TC++TY+HR+ FRSD+ V F  P+  +  + P L+A    ++  +  +  ++  ++      +P WD +  G  A  ++APLGT +SL   V +S+ +++        E         + EPD+  L      D E  ++ +LK DL AY  E   L + D R+RRP
Sbjct:   95 WLIESAGTVPIQRRRDFADGTVDNSQVMLKLREALEQGDAVCLFPEGASRYHPTIAPLKTGVARIVSDTLTQNRD--NPDFNISVLTCSVTYMHRQHFRSDVLVTFHPPMRFRPQDNPELLAPVDYDN--IRSLTARMHKKIASGTFDAPSWDLIQLGRLAASIYAPLGTHMSLGNYVRVSRAFLEAFKTELLPE-----ALADSGEPDLDDL----TRDIE--ELVRLKTDLKAYQTELSRLKIKDDRIRRP 332          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A4Y7TTB1_9AGAR (Acyltransferase-domain-containing protein n=1 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7TTB1_9AGAR)

HSP 1 Score: 154 bits (389), Expect = 5.080e-40
Identity = 91/253 (35.97%), Postives = 140/253 (55.34%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHGKNT-DNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRP 756
            W ++  GT+PIQRR D+   + DN++AM  L EAL  GD +C+FPEG+SRY   +APL+ GV R+V + L R  +  + DF   VV C++TY+HR+ FRSD+ V++  P+       P L+     + A V ++   + +Q+R  ++ +P WD +     A  ++APLGT + L + V LS+R+  V S               A + ++  L     T A+   I QL +DL AY  E   LG+ D R+R+P
Sbjct:   91 WLIQAAGTIPIQRRKDNPDGSADNTEAMESLMEALDAGDAICLFPEGISRYHPEVAPLKTGVARMVSDALGRNRD--DPDFEVYVVPCSITYMHRQHFRSDVLVSWNKPMVFSVKNNPELIGP--ADFARVREVTRDLQEQIRAGILEAPTWDHIRNAKVAARIYAPLGTLMPLGEYVRLSRRFADVFS--------------NAGKGELSNL-----TQADKDSILQLCKDLKAYQDELVALGVKDDRIRKP 320          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A1Y2FHC4_9BASI (PlsC domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2FHC4_9BASI)

HSP 1 Score: 154 bits (389), Expect = 1.050e-39
Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDH-GKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVL 561
            W + N GT+PIQR  D+ GK  DNS    KL  AL+ GDMVC+FPEG+SRY   + PLR GV RI+ + L+R    G + F   V TC++TYLHR  FRSD+ V F  P+ + ++ +P L      E + +  +   +A  +R  ++ +P W  L   H AR L+APLGT + L + V L+QR+V+ L
Sbjct:  106 WLIANAGTLPIQRPKDYAGKKVDNSIVFEKLIHALERGDMVCMFPEGLSRYWPEMTPLRQGVARIIGDTLRRRE--GTEGFQIAVQTCSITYLHRNLFRSDVLVTFHPPLLVSSTTHPGLTTSPPSEPS-IRSLTSSIASSIRSGILDAPSWSLLRCAHTARRLYAPLGTKLGLGEHVRLTQRFVEGL 290          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A8H6ZHB4_9AGAR (PlsC domain-containing protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6ZHB4_9AGAR)

HSP 1 Score: 152 bits (385), Expect = 2.000e-39
Identity = 88/253 (34.78%), Postives = 139/253 (54.94%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDH--GKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRR 753
            W + + GTVP++RR D+  G   DN++ M KL EAL+ GD VC+FPEG+SRY  G+APL+ GV R++ +VL R     + +F   ++ C++TY+HR+ FRSD+ V F  P++     +P L+A     +  +  +  Q+ +Q+    + SP WD +     A  ++APLGT ++L   V + + ++       E           A++ D     D  AT AE A++ QL+ DL  Y     G G+ D R+RR
Sbjct:   91 WLIESAGTVPLKRRKDYDDGIQVDNTEVMEKLMEALELGDAVCLFPEGMSRYHPGIAPLKTGVARLISDVLTRNRN--DPEFEICLLNCSVTYMHRQHFRSDVLVTFHPPMTFTPKSHPELLAPIDYNN--IRLLTAQMHEQISSGTIDSPSWDLVRVAKLAARIYAPLGTRMTLGDHVRVVRAFLAAFKTADE-----------AADADEAQPEDAVATAAESAELAQLRVDLTTYQDWLAGWGIKDDRIRR 328          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: A0A166G8U7_9AGAM (PlsC domain-containing protein n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A166G8U7_9AGAM)

HSP 1 Score: 151 bits (382), Expect = 5.430e-39
Identity = 101/265 (38.11%), Postives = 143/265 (53.96%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHG-KNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVL------------SVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRP 756
            W +   G +P++R  DHG K  DNS  M KL  AL+GGDM+C+FPEG+SRY   LAPL+ G  RIV +VL R     N DF   ++TC++TY+HRE FRSD+ V F  P+ L+A ++P L+A    +  A+ ++   +  Q+    + +P WD +     A  L+APLGT +SL   V + + +V               SV+TE + Q +  T  A E D     D E TD E   +    R+LL        LGL+D R+R P
Sbjct:   82 WLIEASGALPMKRAKDHGGKAVDNSHVMEKLKSALEGGDMICLFPEGLSRYHPQLAPLKTGAARIVSDVLTRNRH--NPDFEISLLTCSITYMHREHFRSDVLVTFHPPMKLRARDHPKLLAPVDYD--AIRQLTTSMQSQISMGTIDAPSWDVVKVSKTAAKLYAPLGTLMSLGDYVRVVRTFVSAFAATQRGHKEHAPSVLTE-DVQLKYATDQAPEED--QPTDAE-TDDENLDLASALRNLLTQ------LGLTDERVREP 332          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: K5W1Q6_AGABU (PlsC domain-containing protein n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5W1Q6_AGABU)

HSP 1 Score: 150 bits (380), Expect = 1.020e-38
Identity = 92/254 (36.22%), Postives = 141/254 (55.51%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHG--KNTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKLTRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLRRP 756
            W + +VGTVPI+RR D+   +  DN++AM+KL EAL+ GD +C+FPEG+SRY   +APL+ GV RIV EVL R  +  +  F   V+TC++TY+HR+ FRSD+ V F  P++    + P L+     +   +  +  ++  ++      +P WD +     A  ++APLGT ++L   V L++ ++ V    T Q  Q+   T  A+  D         TD   +KI QL  DL  Y  +    G+ D R+RRP
Sbjct:   90 WLIESVGTVPIKRRKDYSNPEEVDNTEAMSKLMEALELGDAICLFPEGMSRYHPTIAPLKTGVARIVSEVLTRNRD--DPSFEISVLTCSITYMHRQHFRSDVLVTFHEPMTFTPQDNPELL--DPVDFQDIRDLTSRLHRKITSGTWDAPSWDLIRTAKLAAGIYAPLGTSMALGDFVRLTKTFLDVFKAATVQIDQD---THGATTTD--------QTDLSASKIKQLSIDLKVYQDQLSQWGIKDDRIRRP 328          
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Match: U5H567_USTV1 (PlsC domain-containing protein n=1 Tax=Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) TaxID=683840 RepID=U5H567_USTV1)

HSP 1 Score: 151 bits (381), Expect = 1.470e-38
Identity = 80/198 (40.40%), Postives = 119/198 (60.10%), Query Frame = 1
Query:    1 WWVRNVGTVPIQRRSDHGK---NTDNSQAMAKLYEALQGGDMVCVFPEGVSRYQSGLAPLRPGVGRIVLEVLKR-EHEAGNDDFTARVVTCALTYLHREKFRSDLGVAFACPVSLKASEYPALVAGQ------GGESAAVEKIMEQVADQLRQDLVTSPDWDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLS 564
            W + + GTVPI+R+ +HGK     DNS    KL +AL  GDMVC+FPEG+SRY   +APL+ GV RI+ + L R EH+    DF   V TC++TYLHR  FRSD+ V F  P+ +    +P L+A        G +  +V ++   +  ++R  ++ +P W  + A +  R L+APLGT + L + V L+QR+V+ L+
Sbjct:  117 WLIESAGTVPIKRQKEHGKAGTTVDNSAVFEKLIDALGKGDMVCIFPEGMSRYYPQIAPLKQGVARILSDTLTRHEHQ---QDFKVAVQTCSITYLHRNLFRSDVLVTFHPPIIVTPETHPGLIARPRSEGRPGPDEDSVRRLTSSIGTEIRSGILDAPSWTYIRAANTCRRLYAPLGTKLGLGEHVRLTQRFVEGLT 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15309.3991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV5_ECTSI1.330e-16794.86Acyltransferase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A836CLQ0_9STRA2.730e-6348.36Acyltransferase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A1B7N5L5_9AGAM9.770e-4138.19PlsC domain-containing protein n=2 Tax=Rhizopogon ... [more]
W4K4V0_HETIT2.080e-4037.55PlsC domain-containing protein n=1 Tax=Heterobasid... [more]
A0A4Y7TTB1_9AGAR5.080e-4035.97Acyltransferase-domain-containing protein n=1 Tax=... [more]
A0A1Y2FHC4_9BASI1.050e-3942.55PlsC domain-containing protein n=1 Tax=Leucosporid... [more]
A0A8H6ZHB4_9AGAR2.000e-3934.78PlsC domain-containing protein n=1 Tax=Mycena sang... [more]
A0A166G8U7_9AGAM5.430e-3938.11PlsC domain-containing protein n=2 Tax=Sistotremas... [more]
K5W1Q6_AGABU1.020e-3836.22PlsC domain-containing protein n=3 Tax=Agaricus bi... [more]
U5H567_USTV11.470e-3840.40PlsC domain-containing protein n=1 Tax=Microbotryu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15309contigEcto-sp13_S_contig15309:9..3962 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score484.2
Seed ortholog evalue3.8e-134
Seed eggNOG ortholog2880.D8LQV5
Model size759
KEGG rclassRC00004,RC00039,RC00041
KEGG koko:K13507
KEGG ReactionR00851,R09380
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Phosphate acyltransferases
EggNOG OGs28NCQ@1,2QUY6@2759
EC2.3.1.15,2.3.1.42
Cds size759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462814.824641-CDS-Ecto-sp13_S_contig15309:8..2091681462814.824641-CDS-Ecto-sp13_S_contig15309:8..209Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15309 9..209 +
1681462814.8369713-CDS-Ecto-sp13_S_contig15309:1131..13351681462814.8369713-CDS-Ecto-sp13_S_contig15309:1131..1335Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15309 1132..1335 +
1681462814.847084-CDS-Ecto-sp13_S_contig15309:1856..19961681462814.847084-CDS-Ecto-sp13_S_contig15309:1856..1996Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15309 1857..1996 +
1681462814.8571703-CDS-Ecto-sp13_S_contig15309:2873..29761681462814.8571703-CDS-Ecto-sp13_S_contig15309:2873..2976Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15309 2874..2976 +
1681462814.8686106-CDS-Ecto-sp13_S_contig15309:3851..39621681462814.8686106-CDS-Ecto-sp13_S_contig15309:3851..3962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15309 3852..3962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15309.3991.1prot_Ecto-sp13_S_contig15309.3991.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15309 9..3962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15309.3991.1

>prot_Ecto-sp13_S_contig15309.3991.1 ID=prot_Ecto-sp13_S_contig15309.3991.1|Name=mRNA_Ecto-sp13_S_contig15309.3991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=253bp
WWVRNVGTVPIQRRSDHGKNTDNSQAMAKLYEALQGGDMVCVFPEGVSRY
QSGLAPLRPGVGRIVLEVLKREHEAGNDDFTARVVTCALTYLHREKFRSD
LGVAFACPVSLKASEYPALVAGQGGESAAVEKIMEQVADQLRQDLVTSPD
WDSLVAGHAARCLHAPLGTWISLHQTVALSQRWVKVLSVVTEQERQERKL
TRTASEPDIQMLRDREATDAECAKIGQLKRDLLAYDAEKRGLGLSDRRLR
RPQ
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mRNA from alignment at Ecto-sp13_S_contig15309:9..3962+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15309.3991.1 ID=mRNA_Ecto-sp13_S_contig15309.3991.1|Name=mRNA_Ecto-sp13_S_contig15309.3991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3954bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15309:9..3962+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGGTGGGTGAGGAACGTTGGGACCGTTCCCATCCAGCGCCGGTCGGACCA CGGCAAGAACACCGACAACTCGCAGGCCATGGCCAAGCTTTACGAGGCTC TCCAGGGGGGCGACATGGTCTGCGTCTTCCCCGAGGGGGTTAGCCGCTAC CAGAGCGGCCTGGCCCCTCTCCGGCCCGGCGTCGGCCGTATCGTCCTCGA GGTATTATTTTTGTTTTGTCGGTAGGGGGGGAGTTGGGGGGATGCTCCTC TCTCGCCGCCTGCCGTGCTGAAATTTTTTGGGAAAAAAGGGGTCCTGGGG GCTCCGTACCATCGTGACGTCTCTGACGAATACTTGTATGCTACATTCCT GAGGTATTACTATTTTTTGCTTTGTCCTAGGTGTGTGTGGGGTGCTCCTC TCTCGGCCGTCCAGCACTGAAAAATTTAGTGTTGAGGGAAAAGGGGCCGT GGGGGCTCCCTGCCATCGCGACGTCTCTGACGAATACTTGTTTGCTGCAT TTCTGAGGCATTGGTATTTTTTTGGTCGGGGGGGGGGGGGGGCGCTCCTC TCTCGCCTGCCGTACAGTACTGAAGTACGAAGTAGGTTTGACCGTTGGAG ACTGAAGTACGAAGTAGGTTTGACCGTTGGAGACGACAGCTACTATTGAT GTTGGGCGTGATGAGGGGCTGTTTTACGCGGAAGTGGGCAGTTTTTTTTT GTGGGGGGGGGCGGGGGAATTTTTTTCGCGGGGGGTCTGGCAGAGGCCGG ACTGCGGAACTTCGGTTCTGCAAGAACCTTTCCACGCTCGCGTTGCAGGC GGCACCGTGACAATAAATCATGTTCAGGCAATCGTCCACGCGCTGCTGCT GCTGCCGCAGCCGCCGCCTCCGCTGCTGATTCGGCTGCTGCTCCTGCTGA TTCGGCTCCTGGCTGCTGCTCCTGCTGATTCGGCTGCTGCTAATGCTGAT TCGGCTGCTGCTGATGCTGATTCGGCTGCTTTTTGCCAATTCGACTGATA CCCCTGCTGATTCGGCTGCTGCTACTGTTGATTCGGCTGCTAATGCTGCT GATTCGGCTGCTGCTGCTGCTGTTGCTTCGACTGCTACTGCTACTGCTGA TTCGGCTGCTGCTGCTGCTGCAGGTCCTGAAGCGCGAGCACGAGGCCGGG AACGACGACTTCACCGCCCGGGTGGTCACCTGCGCCCTCACCTACCTCCA CCGGGAGAAGTTTCGGTCGGACCTGGGGGTGGCCTTCGCGTGCCCGGTTA GCCTAAAGGCATCCGAGTACCCCGCCCTGGTAGCGGGCCAGGGGGGGGAG TCTGCGGCCGTCGAAAAGATCATGGAGGTTTGTCGTGGTGTTGGTGCTGA AGGTCAGGGTCGTGTGGTGTTGGTATTGGTGGTGGTGGTTGTTGTGTTGG TGTTGGCGTTGGTGTTGGTTGTCGTGGTGGTGATGCTGCTGCGGGATGGC GGTGCGCGGTAAGCATTGACGGTGGTGGCACGCTGTTGCAGGTGGTATTG GACGGCCGCTGCCGGTTGTTACTGGTGCCGTTGCTGGTCATCGTGCTGCG CGTATTGCAGGGGCGGCGCGGTGGGATCGGCGCCGTTTGACCGACGATGA CATCCCCCCACCCCCGCGGGCCGGCGAATATCGCTGAGTCCCGACATTCT AGGGGTGCGAGGTCAATGCCATAAATAACGACAAGGGTATGCGTTTACAT GAGTACACCCTTCCCTTCCCGCACCCAAATCACCTCGAGTGCCCTTTGGC CCACGATGGACCCCATTGCGAACGCAAACCACTGACCTATGTTCTCCGTT TCGCTACGTCCCCTCTGTTCTTCCGATTCCTAATCCCTCTCCTTCCAGCA AGTAGCTGACCAGCTCCGACAGGACCTGGTCACCTCTCCCGACTGGGACT CGCTTGTGGCTGGGCACGCGGCGAGGTGTCTCCACGCGCCCCTCGGGACA TGGATTTCCCTGCACCAGACGGTGGCCCTCTCACAGCGGTGAGAGTAGTC AGTAGCCTTCGTAGTTTTTTTTTTGTCGTTTTATGTAAACGTGCTGGAGA GAGTACGCAATTTGGGGATGGGGCGTTAAGGGTTTGGTCTGCTAGGGTAT GCGTGCCCCCTCCCTGTTGTGTAATGCTCGTGAACTTAATTTTTCGCGAA GACGGTCCGTCGTCGGCGGCGGCAGTGGGAAACGCACCGAGTATCTTACG CGTTCGCCGCTGGTGGTCGTCAAGAGTGTTTGCACAGGGTAGAAAACAGA AACACAGAGGGAACGAGGACAGAATAAGGGAGCAGCACTGCTGGAAGAGA AGTTGGCGGGAGCACACGGGTTTTTACCCGGGCATCGGCGGCGGAAGATA GAGGGGGCTCCGCAAGATTTTTTTGTTGTTGCACTCCTGTTTGGGTTGTA AAGGAAGGGCTGGAACGTGCTGCCGTCGGTGAGCCGAGCGGACCGGGATA AGACGAACAGAAACGTAGTGACACACGGCTACCCCCCCCCCGCCGCCTTG AAGCCTTGACTATGCTGCTGGTGGGTGGTGTTGCTATCGGTGGCAAACGA GGAGGAACGGGAGATAAAACACGGGTGGAAAATGGGTCCTACCCGCTCCT CCCATGCACTTTTTTTTTGTTTCCAGGTGGGTGAAGATGCTGTCGGTTGT GACCGAGCCGTTTGATTTTTTTTCGTGACTTTCTAGTTGATGACTTTCTA GTCATGAACGTTCACAGTTTTTTTGCCAAGTAGGAGCAGGAATGCGAAGG TAAATGATAACTTGATTCCTCCCCCACCCGAGTATTATCTACCCCCCCCC CCTCCCCAAGACAGTTCCCACACACACACACCCCACCCTCCCCCGTAAAT TTTGTTTTTGTCCAGGTGGGTGAAGGTCCTGTCGGTAGTGACCGAGCAGG AGCGACAAGAAAGGAAGCTCACTCGGACAGCCTCGGAGCCGGACATACAG ATGCTCAGAGATCGCGAGGTGTGTTCGTGCACGTGGTGCGTTGTTAAGCC GTGTCCCTGACCACAACCGTGTCCCCCGACACCAAGTGTTGCACAGGCAG TCCTGGCCTCTTCTTTTTATTTTCCGGCCTTTTTTCTAGCGTGTTTCTGC GTGGTGTTTGTCTTTCATGTCGGCACGAGCCGCTTCCCCCTTGCTGCTTT GTCCTCCTACGCCCTTGCGACTTTCGGGACTCGTGTTGGCGAAACAGTCT TTCCGTTTATTTTCTTGTTTTGTTGGTGGTCTGTTTGGGATCGATCGATT TGGCCGTGAAGAACTCGACCCACTTTTTCTTTAGTACGGTTATTGGTCGA CCTTGTGGCGCTTCAGAGACAACATCTCTTAGCTCTGCGGGCTTCTTGGT TCATTGCTGTTTTGCTCTTGTCGAGAGGGGCAACCAACATCCATCCACAG TCGCTACTGACTGCTGCGCCGCATTATCGGCCGTGGTTTCCAAATGGGTG TCAAGAAATAGTCCTGCTCTCATAACGTGTTTTTATTATGTAGCATGCAT ATTGAGGCCCAACACTTGCCGCCAACGACAAGATACCAGAGACCGAACGC AAGCACCGCAGGAGGGATGGTAGGGGGCCTGAGGGAGAGGAACCCTTTCG TGTGACCACGGTTCGGAGTGTTCGGCACAAGTGCTGTGAGCGCTGACTTG GAAGTAAAGAAAAAAAATAGAAAAAACGACAAGAATGACCTCCCCTCGTT GGCCGGTGACACCCGCCGCTTGAGACGGTTACGTGTGTGTGTTGCTGGTT ACGTATACGCTTGTACGCTCTTCTTGGCTTGGTCCCTCCCACCAACGAGG CCCTTCTCGGCGAAAAATTGCCCTTGTATGCACAATGCCGCAGGCTACCG ATGCAGAGTGCGCAAAGATTGGGCAGCTGAAGAGGGACCTCCTTGCTTAC GACGCGGAAAAGAGAGGGCTTGGGCTGTCGGACAGGAGACTACGCAGGCC TCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15309:9..3962+

>mRNA_Ecto-sp13_S_contig15309.3991.1 ID=mRNA_Ecto-sp13_S_contig15309.3991.1|Name=mRNA_Ecto-sp13_S_contig15309.3991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=759bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15309:9..3962+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGGTGGGTGAGGAACGTTGGGACCGTTCCCATCCAGCGCCGGTCGGACCA
CGGCAAGAACACCGACAACTCGCAGGCCATGGCCAAGCTTTACGAGGCTC
TCCAGGGGGGCGACATGGTCTGCGTCTTCCCCGAGGGGGTTAGCCGCTAC
CAGAGCGGCCTGGCCCCTCTCCGGCCCGGCGTCGGCCGTATCGTCCTCGA
GGTCCTGAAGCGCGAGCACGAGGCCGGGAACGACGACTTCACCGCCCGGG
TGGTCACCTGCGCCCTCACCTACCTCCACCGGGAGAAGTTTCGGTCGGAC
CTGGGGGTGGCCTTCGCGTGCCCGGTTAGCCTAAAGGCATCCGAGTACCC
CGCCCTGGTAGCGGGCCAGGGGGGGGAGTCTGCGGCCGTCGAAAAGATCA
TGGAGCAAGTAGCTGACCAGCTCCGACAGGACCTGGTCACCTCTCCCGAC
TGGGACTCGCTTGTGGCTGGGCACGCGGCGAGGTGTCTCCACGCGCCCCT
CGGGACATGGATTTCCCTGCACCAGACGGTGGCCCTCTCACAGCGGTGGG
TGAAGGTCCTGTCGGTAGTGACCGAGCAGGAGCGACAAGAAAGGAAGCTC
ACTCGGACAGCCTCGGAGCCGGACATACAGATGCTCAGAGATCGCGAGGC
TACCGATGCAGAGTGCGCAAAGATTGGGCAGCTGAAGAGGGACCTCCTTG
CTTACGACGCGGAAAAGAGAGGGCTTGGGCTGTCGGACAGGAGACTACGC
AGGCCTCAG
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