mRNA_Ecto-sp13_S_contig1530.3987.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI) HSP 1 Score: 716 bits (1849), Expect = 2.810e-243 Identity = 420/649 (64.71%), Postives = 426/649 (65.64%), Query Frame = 1
Query: 1 EGRSALAGGMGMKEGVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLHWGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGLRRLGLELTTRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNRVTESRIRGELERRDPSGSGVISEKSLRNVLEAFGVDLAGADLGRLMHRFDAHEDGTASIERVVSFCLLSGNNDDPAGDDRRDSSSRSKGRGGHRGRGHFSNDDSAAVTEARRYHATPRDSSPAVNASYGGSNSTRKGVTFRDGSNDSHPSRSKNVALLRASLRRLMVPSTDVASRGGAGNAIGPGLREKLRRALQVVADARGARRGSRHVDRETIRRAMVTCGAPLESNLLGDLERRFDRRGTGEINVEDFVEYMAREVENDVWERVAAEMARTQRGTSSARDGFIRRFISDLGRFVDGREEISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDVLDALTRGAVVARGNLEEESDSDDSSIDSTSTATAVLDGLRSLVHAAERERGVDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQAS 1947
EGRSA AGGMGMKEGVVSRQSFR VMKRIKADLS+GDLADLEKRFAVSSSSSSSNDGGLVG+FSA +GR AGN A GV+YLELLHWGAPGGDSR GDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSE DLSDGLRRLGLEL TRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNRVTESRIRGELERRDPSGSGVISEKSLRN+LE FGVDLAGADLGRLMHRFDAHE + VEYMAREVENDVWERVAAEMARTQRGTSSAR GFI FISDLGRFVDGREEISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDV ALTRGAVVARGN EEESDS S STATAVLD LR LV AAERERGVDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQAS
Sbjct: 528 EGRSASAGGMGMKEGVVSRQSFRAVMKRIKADLSEGDLADLEKRFAVSSSSSSSNDGGLVGTFSARQGRVAGNAAAGVRYLELLHWGAPGGDSRGGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSEPDLSDGLRRLGLELATRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNRVTESRIRGELERRDPSGSGVISEKSLRNILETFGVDLAGADLGRLMHRFDAHE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NMVEYMAREVENDVWERVAAEMARTQRGTSSARGGFIHGFISDLGRFVDGREEISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDVRGALTRGAVVARGNSEEESDSXXXXXXSASTATAVLDDLRGLVRAAERERGVDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQAS 980
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A6H5KU01_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU01_9PHAE) HSP 1 Score: 170 bits (431), Expect = 7.100e-41 Identity = 90/100 (90.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query: 1 EGRSALAGGMGMKEGVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLHWGAPGGDSRDGDDET 300
EGRSALAGG GMKEGVVSRQSFRTVMKRIKADLS+GDL DLEKRFAVSSSSSSSNDGGLV SF AGR RAAGNTA GV+YLELLHWGAPGGDSR GDDE
Sbjct: 530 EGRSALAGGTGMKEGVVSRQSFRTVMKRIKADLSEGDLDDLEKRFAVSSSSSSSNDGGLVDSFDAGRARAAGNTAAGVRYLELLHWGAPGGDSRGGDDEV 629
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.460e-31 Identity = 89/258 (34.50%), Postives = 135/258 (52.33%), Query Frame = 1
Query: 31 GMKEGVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLHWGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGLRRLGLELTTRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNR--VTESRIRGELERRDPSGSGVISEKSLRNVLEAFGVDLAGADLGRLMHRFDAHEDGTASIERVVSF 798
G G + R++ V++++ +L L DLE++F RAA T+ G+ Y+ELL+ P +R + W EE+LR MI+RRF+ W PG L++A++HFD +RK K+ DL+DGLR L ++L+ +QE+ LF MDLD G + Y + +VF RDP H + KV +R + S L D + SG++ + VLE GV+L ++ RL RFD E G S ++F
Sbjct: 1694 GSYAGTLDRKALERVLRQLDINLEGKQLDDLERKF-----------------------RAA--TSGGIHYVELLNAVLP---TRPTVGDNWRVEEKLRAMIKRRFEWWQPGALRRAYKHFDTKRKNKLLPADLADGLRALKVKLSAQQEQDLFDGMDLDKDGTISYTEFIVFVRDPCHPFLEQKVRYATHRAKLRPSDAEDALRDVDDNRSGLVGLRDFGVVLERLGVELTSSERKRLAQRFDGDESGNVSSSAFLAF 1923
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.460e-31 Identity = 89/258 (34.50%), Postives = 135/258 (52.33%), Query Frame = 1
Query: 31 GMKEGVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLHWGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGLRRLGLELTTRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNR--VTESRIRGELERRDPSGSGVISEKSLRNVLEAFGVDLAGADLGRLMHRFDAHEDGTASIERVVSF 798
G G + R++ V++++ +L L DLE++F RAA T+ G+ Y+ELL+ P +R + W EE+LR MI+RRF+ W PG L++A++HFD +RK K+ DL+DGLR L ++L+ +QE+ LF MDLD G + Y + +VF RDP H + KV +R + S L D + SG++ + VLE GV+L ++ RL RFD E G S ++F
Sbjct: 1694 GSYAGTLDRKALERVLRQLDINLEGKQLDDLERKF-----------------------RAA--TSGGIHYVELLNAVLP---TRPTVGDNWRVEEKLRAMIKRRFEWWQPGALRRAYKHFDTKRKNKLLPADLADGLRALKVKLSAQQEQDLFDGMDLDKDGTISYTEFIVFVRDPCHPFLEQKVRYATHRAKLRPSDAEDALRDVDDNRSGLVGLRDFGVVLERLGVELTSSERKRLAQRFDGDESGNVSSSAFLAF 1923
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S1U271_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U271_9STRA) HSP 1 Score: 142 bits (358), Expect = 8.320e-31 Identity = 95/279 (34.05%), Postives = 141/279 (50.54%), Query Frame = 1
Query: 43 GVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLH-----WGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGL---RRLGLELTTRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNR--VTESRIRGELERRDPSGSGVISEKSLRNVLEAFGVDLAGADLGRLMHRFDAHEDGTASIERVVSFCLLSGNNDDPAGDDRRD 849
G+VS F++ + + +DL++G+ +L +RF G+ V YLELL+ PG + W EE R ++R+RFD W+P L+KAF HFD ++G+ +E +DGL RR+G L+ QE LF MDLD G + YPD VVF RDPNH DV ++ L R V+ +R+R LE + + +S+++ V+ GV L ++ R++ RF EDG SI RV++F + P G D RD
Sbjct: 744 GLVSVAEFKSALYALYSDLNEGEEEELIERF--------------------------GDETERVAYLELLYALPPSTFTPGHPRTVWVGDNWRVEEHFRNLVRQRFDYWVPNGLRKAFYHFDVDKQGEFNEARFADGLKLLRRMG-RLSADQEHLLFARMDLDGDGLVTYPDFVVFIRDPNHVDVSHRLRRDLRRADVSAARMREMLEDEENTRGATVSKRTFDRVMGDLGVSLTRQEMDRIIIRFSPDEDGAVSIRRVMAFVRGT-----PEGGDERD 990
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S3NNZ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNZ0_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.550e-30 Identity = 161/620 (25.97%), Postives = 261/620 (42.10%), Query Frame = 1
Query: 232 VQYLELLHWGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGLRRLGLELTTRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRL-NRVTESR-IRGELERRDPSGSGVISEKSLRNVLEAFGV-DLAGADLGRLMHRFDAHEDGTASIERVVSFCLLSGNNDD---PAGDDRRDS-------------------SSRSKGRGGHRGRGHFSNDDSAAVTEARRYHATPRDSSPAVNASYGGSNSTRKGVTFRDGSNDSHPSRSKNVALLRASLRRLMVPSTDVASRGGAGNAIGPGLREKLRRALQVVADARGA------RRGSRHVDRETIRRAMVTCGAPLESNLLGDLERRFDRRGTGEINVEDFVEYMAREVENDVWERVAAEMARTQRGTSSARDGFIRRFISDLGRF-VDGREEISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDVLDALTRGAVVARGNLEEESDSDDSSIDSTSTATAVLDGLRSLVHAAERERGVDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQASGRKYGYVCYKDFVKAM 1995
+ Y+E+L+ P + GD W EERLR MI+R+FD W+PG L+KAFRHFD ++KG +S+++L+DGL L L+ + Q LF +MDLD G + + ++F +DP HH + K+ + N SR R + D G+G+ + L GV L+ +++ RL RFD +DG IER +F L G + PA +D R S R GRG + G D + RR +S N + ++ T+ + D D H S + V A+L DV S+ I +R +++R + + A + GS ++R+ +R + G L+ +LL L R + R +R A + F VDG ++ EL + + G +L E L + R G + D AL G+ + E + +++ R +V A G + + FEHFD G G + ++ +GL+ L L ++ S ++ ++E+F S R G++ Y+DFV+A+
Sbjct: 735 IHYIEMLNTLIP---IKSGDG--WRLEERLRAMIKRKFDWWVPGRLRKAFRHFDIKKKGLISQSELADGLSALKLKHSAEQLYALFSSMDLDKDGLISCSEFIIFVKDPWHHFIERKIKRAIRNSALSSRDARRIFDDLDRGGTGLFGRRDFATALTQLGVAGLSTSEIQRLAQRFDIEDDGNVMIERFFNF--LQGTTESTHSPARNDNRPSPHTQTPILRLLRTEIRRIAQHRGNGRGPNYGAAFRDLDRDGSGRLNRREFRRALES---FNLNLSSADLTQI-IDHFDSDGDGHISYREFVKFADANLE-------DVVSK------IEDAVRAEIKRIAKHSSSAFASVFRAFDENGSGIINRQEFKRGLEKLGFELDESLLQGLIDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRLKRLVQDATEKGGATLFDCFRHFDVDGSGDVDEIELLKGMRRLG--IELTAYEAKKLAERFPSRRSGSIKYHDFCQAL--GSFSSNYQKNENLEQ-------------IIERFRRIVKDANIH-GTTIAQCFEHFDIDGSGGIDAEELRQGLKKLDLA--ITDSQIACLIEAFVGSRR--GHIRYRDFVRAI 1308
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S2S4Y5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4Y5_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.510e-17 Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 1
Query: 43 GVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLVGSFSAGRGRAAGNTATGVQYLELLHWGAPGGDSRDGDDETWAAEERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSETDLSDGLRRLGLELTTRQERGLFRTMDLDTQGFLVYP 531
G + R + R ++ ++ +L++ ++++LE RF + AG + V YLE+LH +P S E W EE+LR +I++ F +PG L+K FRHF+ RK +++E DLS GL+ L L+ QE LF +D D G + YP
Sbjct: 24 GHIPRAALRHALRELRGNLTESEVSELELRF-----------------------QGAGQDS--VHYLEMLHVASP--SSPLTTSEVWRHEEKLRLLIKKDFQWRVPGKLRKVFRHFNVHRKPRITEADLSGGLKALKFRLSAEQEHQLFMVLDHDRDGLVSYP 159
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A7S3XYC1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYC1_HETAK) HSP 1 Score: 69.3 bits (168), Expect = 1.230e-8 Identity = 105/441 (23.81%), Postives = 169/441 (38.32%), Query Frame = 1
Query: 1126 RGGAG-NAIGPGLREKLRRALQVVADARGA-----------RRGSRHVDRETIRRAMVTCGAPLESNLLGDLERRFDRRGTGEINVEDFVEYMAR--------------EVENDVWERVAAEMARTQRGTSSARDGFIRRFISDLGRFVDGREEISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDVLDALTRGAVVARGNLEEESDSDDSSIDSTSTATAVLDGLRSLVHAAERERG--VDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQASGRKYGYVCYKDFVKAMEGHPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDIERLVDRLKEEIGRLTEEEDGPPPFRQVFEAADHVGLGTLPSLAFRRCLLDGLGLDLTEAECEALLEYLDTEGDNNISYREFLEFV 2364
RG G +A+ +R++L R + A ARGA + G + R A+ G L + L R DR G I+ ++F + + + + +V E+ R + + A D F +D+ + G IS++E + L+ G +L ++ L D LD D GR+ + + A+ R E S+D +R V R RG D F D+ G GE+SK +F E L +G LS +D ++ + + Y++F G A +E L +++EE+ RL G P + VF D G G + + F L D +G L+ + AL ++LDT+G++ ISYREF F
Sbjct: 1 RGERGLDALEAKVRDELAR---LAATARGAPDFFAVFNEIDQDGGGELSRLEFMEALERMGFNLSAADARALANRLDRDGNXRISYKEFERFALEGSPRHGKRAGPRHEKAVDGLAAKVQEEINRLAKTSEGAPDFFT--VFNDID--LSGSGVISKKEFMKMLKSLG--FRLDRDDAEDLADRLDFDGNGRISYEE----FEKFALAGRREGRREGRQRLLSLDDLEAK------VRDEVDRLARTRGGEPDYFTIFNDMDQDGSGEISKLEFIEALSLMGF--QLSSADARKLANHMDLD--RDDRISYQEFEAFALG---------------------GRKKHRQKKLPAFSVEALESKVQEEVTRLARTRGGEPDYFTVFNDIDRNGGGEISKIEFIEAL-DLMGFKLSTKDARALADHLDTDGNDQISYREFEAFA 396
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Match: A0A835YU49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 5.320e-5 Identity = 56/219 (25.57%), Postives = 97/219 (44.29%), Query Frame = 1
Query: 1303 LERRFDRRGTGEINVEDFVEYMAREVENDVWERVAAEMARTQRGTSSA-RDGFIRRFISDLGRFVDGREE--ISRRELRRSLELQGGASKLREEEILVLCDSLDLDRRGRVHLSDVLDALTRGAVVARGNLEEESDSDDSSIDSTSTATAVLDGLRSLVHAAERERGVDLLESFEHFDRRGQGEVSKDDFWEGLQSLGLGQDLSRSDVSRVVESFQASG 1950
L +RFD G G+I++ +F+ ++ RE + A A+ ++ A +DG + +DG + I+ +EL ++ G + +++ +L DLD GRV L + L R LE + LR ++ AE G +F HFD+ G GE+++D+F +GL+ +G+ D +V V+ F SG
Sbjct: 2062 LLQRFDSGGNGKISLAEFMAFLGRE-----YSPTAVAEAKLKKILLKAEKDGTS---LESAFAALDGNRDGVITTKELESAMMTLGVFDAMSKDQAALLLRRFDLDGDGRVSLREFLAFAGRPYTAGDSPLETK--------------------LRRVIGKAEA-MGTPPDAAFAHFDKDGDGEITRDEFRKGLEEMGVFADFGAEEVDEVLRRFDPSG 2251 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1530.3987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1530.3987.1 >prot_Ecto-sp13_S_contig1530.3987.1 ID=prot_Ecto-sp13_S_contig1530.3987.1|Name=mRNA_Ecto-sp13_S_contig1530.3987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=837bp MGMKEGVVSRQSFRTVMKRIKADLSDGDLADLEKRFAVSSSSSSSNDGGLback to top mRNA from alignment at Ecto-sp13_S_contig1530:9040..16773- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1530.3987.1 ID=mRNA_Ecto-sp13_S_contig1530.3987.1|Name=mRNA_Ecto-sp13_S_contig1530.3987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7734bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1530:9040..16773- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1530:9040..16773- >mRNA_Ecto-sp13_S_contig1530.3987.1 ID=mRNA_Ecto-sp13_S_contig1530.3987.1|Name=mRNA_Ecto-sp13_S_contig1530.3987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2511bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1530:9040..16773- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |