prot_Ecto-sp13_S_contig15294.3978.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15294.3978.1
Unique Name	prot_Ecto-sp13_S_contig15294.3978.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	153

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15294.3978.1 vs. uniprot
Match: D7G281_ECTSI (Protein-serine/threonine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G281_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.780e-90
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MIERMAQTALGGSSSSGRAPQRLLRAVETYAARDPVRATLKGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGASTHYLDQLLRVHADTFQEVRDAGSVVERMLSHGTREDSLQRQRCDPLDDFRRTIDAVNNRHAPNV 148
            MIERMA +ALGGSSSS RAPQRLLRA+ETY AR PVRATL+GLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGASTHYLDQL RVHADTFQE+RDAGSVVERMLSHGTREDSL++QRCDPLDDFRRT+DAVNNRHAPNV
Sbjct:    1 MIERMAPSALGGSSSSRRAPQRLLRAIETYTARHPVRATLRGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGASTHYLDQLFRVHADTFQELRDAGSVVERMLSHGTREDSLRQQRCDPLDDFRRTVDAVNNRHAPNV 148

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BLAST of mRNA_Ecto-sp13_S_contig15294.3978.1 vs. uniprot
Match: A0A6H5L4H7_9PHAE (Protein-serine/threonine kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H7_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 5.550e-89
Identity = 136/148 (91.89%), Postives = 140/148 (94.59%), Query Frame = 0

Query:    1 MIERMAQTALGGSSSSGRAPQRLLRAVETYAARDPVRATLKGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGASTHYLDQLLRVHADTFQEVRDAGSVVERMLSHGTREDSLQRQRCDPLDDFRRTIDAVNNRHAPNV 148
            MIERMA++ALGGSSSS  APQRLLRAVETY ARDPVRATLKGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAG STHYLDQL RVHA TFQE+ DAGSVVERML HGTREDSLQRQRCDPLDDFRRT+DAVNNRHAPNV
Sbjct:    1 MIERMAKSALGGSSSSRSAPQRLLRAVETYTARDPVRATLKGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGTSTHYLDQLFRVHAATFQELLDAGSVVERMLPHGTREDSLQRQRCDPLDDFRRTVDAVNNRHAPNV 148

[Close]

BLAST of mRNA_Ecto-sp13_S_contig15294.3978.1 vs. uniprot
Match: A0A835YM41_9STRA (Protein-serine/threonine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM41_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.520e-9
Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 0

Query:   23 LLRAVETYAARDPVRATLKGLVHHGRHARSKFVSHHLRDQLCVRLSHQMRRLELFP--RPAGASTHYLDQLLRVHADTFQEVRDAGSVVERMLSHGTREDSLQRQRCDPLDDFRRTIDAVNNRHAPNV 148
            L   +E YAA+     T+  LV      +S +V+H L+ +LC+RL+HQ++RL + P  RP       +DQLLRVH DTF+ +     V     S G              DDF R++ AV +RHA NV
Sbjct:    4 LTATLERYAAKRLTPVTMGHLVAAVTEPQSAYVNHSLKQELCIRLAHQLKRLRMLPHVRP-------IDQLLRVHKDTFETMLQ---VKGSQHSSG--------------DDFYRSLTAVQDRHATNV 107

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15294.3978.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15294.3978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G281_ECTSI	1.780e-90	91.89	Protein-serine/threonine kinase n=1 Tax=Ectocarpus...	[more]
A0A6H5L4H7_9PHAE	5.550e-89	91.89	Protein-serine/threonine kinase n=1 Tax=Ectocarpus...	[more]
A0A835YM41_9STRA	3.520e-9	36.72	Protein-serine/threonine kinase n=1 Tax=Tribonema ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036784	Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain superfamily	GENE3D	1.20.140.20		coord: 12..150 e-value: 6.9E-10 score: 40.7
IPR036784	Alpha-ketoacid/pyruvate dehydrogenase kinase, N-terminal domain superfamily	SUPERFAMILY	69012	alpha-ketoacid dehydrogenase kinase, N-terminal domain	coord: 21..148
IPR018955	Branched-chain alpha-ketoacid dehydrogenase kinase/Pyruvate dehydrogenase kinase, N-terminal	PFAM	PF10436	BCDHK_Adom3	coord: 39..148 e-value: 1.0E-5 score: 25.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15294	contig	Ecto-sp13_S_contig15294:29..2792 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15294.3978.1	mRNA_Ecto-sp13_S_contig15294.3978.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15294 29..2792 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15294.3978.1 ID=prot_Ecto-sp13_S_contig15294.3978.1|Name=mRNA_Ecto-sp13_S_contig15294.3978.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MIERMAQTALGGSSSSGRAPQRLLRAVETYAARDPVRATLKGLVHHGRHA
RSKFVSHHLRDQLCVRLSHQMRRLELFPRPAGASTHYLDQLLRVHADTFQ
EVRDAGSVVERMLSHGTREDSLQRQRCDPLDDFRRTIDAVNNRHAPNVVS
RP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036784	AK/P_DHK_N_sf
IPR018955	BCDHK/PDK_N