prot_Ecto-sp13_S_contig15291.3977.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15291.3977.1
Unique Nameprot_Ecto-sp13_S_contig15291.3977.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15291.3977.1 vs. uniprot
Match: A0A6H5L6K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE)

HSP 1 Score: 47.0 bits (110), Expect = 6.700e-5
Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = 0 
Query:    1 RCIWNDLPHGLQFAILFLQEG 21
            RCIWNDLPHGLQFAILFL  G
Sbjct:   87 RCIWNDLPHGLQFAILFLMLG 107
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BLAST of mRNA_Ecto-sp13_S_contig15291.3977.1 vs. uniprot
Match: D7G4F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F6_ECTSI)

HSP 1 Score: 45.8 bits (107), Expect = 8.320e-5
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 0 
Query:    1 RCIWNDLPHGLQFAILFLQEG 21
            RC+WNDLPHGLQFAILFL  G
Sbjct:   39 RCMWNDLPHGLQFAILFLMLG 59
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15291.3977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6K1_9PHAE6.700e-590.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G4F6_ECTSI8.320e-585.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15291contigEcto-sp13_S_contig15291:3059..3507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15291.3977.1mRNA_Ecto-sp13_S_contig15291.3977.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15291 2985..3507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15291.3977.1 ID=prot_Ecto-sp13_S_contig15291.3977.1|Name=mRNA_Ecto-sp13_S_contig15291.3977.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
RCIWNDLPHGLQFAILFLQEGSCRLLNATTGVSVSKARVSLSRKPKSRSR
QLESH*
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