mRNA_Ecto-sp13_S_contig1528.3969.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 1005 bits (2599), Expect = 0.000e+0 Identity = 481/511 (94.13%), Postives = 491/511 (96.09%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEAPTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXX----YEMPVTMPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSDGVCDHKCSGDETDFCGGFDAFDLYKITEAREPTGDEYVGCFADNPEDWVIGGEIKSQPDMTQAVCRTHCEDLDANFYATQNGNECWCGMSEEEEDYTRSGRGSCLTGCSGDPAVACGGFDAFNLFKFGGTR 1521
GADAVQARTIDNIDPD+LADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELK VINNNHWGHIEYFLCDTADMDDPD VVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRG+NEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQC+HCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGE PTV EPT XXXXXXXXXXXXXXXXXXXX YEMPVT+PVEASYSYVGCFAD+KHDRVFEYMRTSFTMTTAVCLEYCL RRAT+MATQYGIECWCSVDAETEYDRHSDGVCDH C GDE D+CGGFDAFDLYKITE REPTGDEYVGCFADNPEDWV+GGEIKSQPDMTQAVCRT+CEDLDANFYATQNG ECWCGMSEEEEDYTRSGRGSCL GCSGDPAVACGGF+AFNLFKFGGTR
Sbjct: 85 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDDVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGQNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCDHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEMPTVPEPTXXXXXXXXXXXXXXXXXXXXXEQTVAAPVYEMPVTLPVEASYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKFGGTR 595
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 901 bits (2328), Expect = 0.000e+0 Identity = 446/566 (78.80%), Postives = 464/566 (81.98%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGE----APTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------------------------YEMPVTMPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSDGVCDHKCSGDETDFCGGFDAFDLYKITEAREPTGDEYVGCFADNPEDWVIGGEIKSQPDMTQAVCRTHCEDLDANFYATQNGNECWCGMSEEEEDYTRSGRGSCLTGCSGDPAVACGGFDAFNLFKFGGTRE 1524
GADAVQARTIDNIDPD+LADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTYTSGSIIELK VINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+N ETDQ+GRP+L+ G+ GLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL+ADGE AP P P XXXXXXXXXXXXXXXXXXXXX YEMPVTMPV+ YSYVGCFADSK DRVFEYM+TS TMTTAVCLEYCL RRAT+MATQYG ECWCSVDAE EYDRHSDGVCDH C GD D CGGFDAFDLYKITE EPTGDEYVGCFAD+ ED ++G EIK QPDMTQAVCRT+CE+ DA FYATQ G+ECWCGMS +EEDY R GRGSCL GCSGDP VACGGFDAFNLFKF G E
Sbjct: 64 GADAVQARTIDNIDPDILADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYTSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGENGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLLADGETSSTAPAAPTPDPEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARXXXXSXXXXXXXXXXXXXXXXXXXXPVAAPVYEMPVTMPVDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAE 629
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE) HSP 1 Score: 756 bits (1951), Expect = 7.250e-269 Identity = 399/601 (66.39%), Postives = 440/601 (73.21%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDN-------------------GYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEA-PTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXXY-------------------------------EMPVT-------------------MPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSD----------GVCDHKCSGDETDF----CGGFDAFD------------LYKITEAREPTGDEYVGCFADNPEDWVIGGEIKSQPDMTQAVCRTHCEDLDANFYATQNGNECWCGMSEEEEDYTRSGRGSCLTGCSGDPAVACGGFDAFNLFKFGG 1515
GADAVQARTIDNIDPD+LADYG GDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIELK VINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+ ETDQSGR +L+ G+ GLD+ GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEF+PEWPG+CAP+KE+WLPHKNPGCSDEGQKWGNVFFGCSDITLVADG+ PT EPT XXXXXXXXXXXXXXXXXXXXXXXX E PV +PVEA Y++VGCF+D+K DRV E M TS MT A+C E+C+ RRAT+MATQYG ECWCS D++ +Y RHSD G+C +C GD+ C +A + LYKITE EP G+EYVGCFAD+ +D ++ EIK QPDMTQAVCRT+CE A+FYATQ G+ECWCG S+++EDY R G GSC+ CSGDP ACGGFD+FNLFK G
Sbjct: 71 GADAVQARTIDNIDPDILADYGDGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQSGRSMLNDGEVGLDHVSIMYAYQVYGTSSWRSAKGYINTGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPNKEEWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGKTFPTAPEPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPVAASVYEMXXXXXXXXXXXADVPVEA-YTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFKLKG 670
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI) HSP 1 Score: 653 bits (1684), Expect = 1.110e-231 Identity = 312/479 (65.14%), Postives = 339/479 (70.77%), Query Frame = 1
Query: 106 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEAPTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXXYEMPVTMPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSD------GVCDHKCSGDET------DFCGGFDAFDLYKITEAREPTGDEYVGCFADNPEDWVIGGEIKSQPDMTQAVCRTHCEDLDANFYATQNGNECWCGMSEEEEDYTRSGRGSCLTGCSGDPAVACGGFDAFNLFK 1506
GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIE++ VINNNHWGHIEYFLCDTADMDD DGVVTQDCLN YPLDRDETD WNSPIDP+YPGRFFVNPECRG+NEETDQSGRP L+GG GLD GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVA+GE P+ +P +P+ +C E+C A +MATQ+G ECWCS D + +Y RHSD G+C C GD D C + E E DEYVGCFAD+PED ++G EIK QPDMTQAVCRT+CE DA+FYATQ G+ECWCGMS +EEDY R G GSCL CSGDP CGG DAFNL+K
Sbjct: 2 GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRAVINNNHWGHIEYFLCDTADMDDADGVVTQDCLNKYPLDRDETDWWNSPIDPNYPGRFFVNPECRGENEETDQSGRPELTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVANGEIDLQGNPSCTCRRTYHRDLRNNINTQFLVQIPTPPIPEQVPL------------------------------CMCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNIDGGDGLCTTACQGDTCWRERALDACAVLVDRRALLVEEGDEV--DEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYK 448
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: A0A6H5JMP7_9PHAE (Chitin-binding type-4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP7_9PHAE) HSP 1 Score: 551 bits (1421), Expect = 3.040e-192 Identity = 246/261 (94.25%), Postives = 252/261 (96.55%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 783
GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIELK VINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETD WNSPIDPDYPGRFFVNPECRG+ ETDQ+GRP+L+ G+ GLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPG+CAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL
Sbjct: 106 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYQSGSIIELKAVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDWWNSPIDPDYPGRFFVNPECRGETGETDQTGRPMLNDGEVGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGDCAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITL 366
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: A0A6H5JNS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS7_9PHAE) HSP 1 Score: 536 bits (1382), Expect = 4.360e-188 Identity = 239/266 (89.85%), Postives = 250/266 (93.98%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEPEWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGE 798
GAD VQARTI NIDPDVLADYG G+ WIVGAAWD GERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYST NTLW PISTY SGSIIE++TVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNM+PLDRDETD WNSPID +YPGRFFVNP+CRG NEETDQSGRPVL+GG GLD GYIN GRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEF+PEWPG+CAPDKEDWLPHKNPGC DEG+KWGNVFFGCSDITLVA+GE
Sbjct: 8 GADEVQARTITNIDPDVLADYGDGNYWIVGAAWDMGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTPNTLWPPISTYESGSIIEIRTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMHPLDRDETDWWNSPIDQEYPGRFFVNPDCRGGNEETDQSGRPVLTGGGLGLDKGYINNGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFDPEWPGDCAPDKEDWLPHKNPGCGDEGRKWGNVFFGCSDITLVANGE 273
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 350 bits (897), Expect = 4.470e-112 Identity = 166/231 (71.86%), Postives = 179/231 (77.49%), Query Frame = 1
Query: 904 MPVTMPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSDGVCDHKCSGDETDFCGGFDAFDLYKITEAREPTGDEYVGCFADNPEDWVIGGEIKSQPDMTQAVCRTHCEDLDANFYATQNGNECWCGMSEEEEDYTRSGRGSCLTGCSGDPAVACG------------------------GFDAFNLFKFGGTRE 1524
MPV+MP E YSYVGCFADSK DRVFEYM+TS TMTTAVCLEYCL RRATFMATQ+GIECWCSVDAE EYDRHSDGVCD +C G+ TD CGGFDAFDLYKITE EPTGDEYVGCFAD+ ED ++G EIK QPDMTQ VCRT+CE+ DA FYATQ G+ECWCGMSE+E+DY R GRGSCL GCSGDP VACG GFDAFNLFKF G E
Sbjct: 1 MPVSMPAEEGYSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAE 231
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 330 bits (847), Expect = 1.520e-104 Identity = 175/408 (42.89%), Postives = 228/408 (55.88%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPNIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEAPTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXXYEMPVTMPVEASYSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRHSDGVCDHKCSGDETDFCGGFDAFDLYKITEARE 1221
G V+ R DN+D L YGGG+ + + GE N NYLE+++IA HGVCGDP Q + N YST+N W P+ ++TSG ++E+ V+N HWGH E+F+C+T DMDDPDGV TQ+C NM+PL R + DG SPIDP+YPGR++V+PECR EET+QS + GY RY LP+I+CEHC+LQM YY C H GY EF P WP CAP+K DW+ C GQ + F+ CSD ++ +DG P P P EM Y YVGC+ D + DR+ S MT C EYC A +MATQY EC+CS D + +Y+RH +CD C GDE + CGG +AFDLY+I + +
Sbjct: 57 GPKYVKQRAYDNVDSATLDAYGGGEEFPLYF----GEFADNGNYLETNEIAKRHGVCGDPEQNADEGTNVYSTANINWDPLDSFTSGQVLEMDIVMNAYHWGHCEFFVCNTDDMDDPDGVPTQECFNMHPLTRADDDGDASPIDPNYPGRYYVDPECR--EEETEQSSNSI---------EGYNIKMRYVLPDIECEHCILQMVYYTGNTCKHIGYEEFNPTSWPSSCAPNKWDWIELDRYVCGTRGQ-YPEEFWACSDFSMTSDGSTPA-DAPMPDPVDEEDDEDSTDGGM---------EM---------YEYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGTAMCDKACRGDEGETCGGENAFDLYRIMPSMD 429
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 311 bits (798), Expect = 3.930e-94 Identity = 199/475 (41.89%), Postives = 242/475 (50.95%), Query Frame = 1
Query: 13 VQARTIDNIDPDVLADYGGGDVWI-VGAAWDKGERCPNNNYLESDKIAVGHGVCGDPP---QGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLP-NIQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVA-----------------------------------DGEAPTVSEPTPXXXXXXXXXXXXXXXXXXXXXXXXYEMPV---------------TM---PVEAS-------------YSYVGCFADSKHDRVFEYMRTSFTMTTAVCLEYCLGRRATFMATQYGIECWCSVDAETEYDRH-----SDGVCDHKCSGDETDFCGGFDAFDLYKI 1206
VQ R DP +LA+YG G W + +DKGE PN NY+E I+V HGVCGDP QGG D NTYST N W + + G +E+K V+ H+GH+E+F+CDT D+DDPD V TQ+C N YPL R E DG NSPIDP+YPGR++ +P CR E D R +GG GY+ Y LP N+ CEHCVLQM YY C+HPGY EF P W ECAP+K DW+ C D F+ CSDI + A D +EPT XXXXXXXXXXXXX P TM P+E + YVGCF D+K DR+ S MTT VCL +C A FMATQ+G ECWCS D +Y+RH +D VCD C GD+T CGGF++FDLYK+
Sbjct: 28 VQDRARRLTDPAILAEYGDG--WYPLRWVYDKGEMAPNGNYIEPQGISVRHGVCGDPKSGDQGGQDGENTYSTPNKDWPVLQEFKQGQSMEIKAVMKAWHYGHLEFFICDTQDLDDPDDVATQECFNKYPLTRSEGDGVNSPIDPNYPGRYYADPPCRENETEQDYDWR---AGG------GYVMTMNYDLPENLVCEHCVLQMWYYTGHKCYHPGYEEFNPASWGSECAPNKSDWIDLSIDYCGDNEWNLAEEFWACSDIAITAETNWCLPCPFFHRICRWIVACRDPDAQPRSRPTATDAPVDATAEPTAAATAEPLHPTPXXXXXXXXXXXXXTPEPTXXXXXXXXXXXXXGTTMTPEPIETTPPPTDGDVGDGEEAEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKL 491
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Match: D7G4D7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D7_ECTSI) HSP 1 Score: 245 bits (625), Expect = 8.910e-73 Identity = 122/276 (44.20%), Postives = 165/276 (59.78%), Query Frame = 1
Query: 1 GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIAVGHGVCGDPPQGGLDNPNTYSTSNTLWRPISTYTSGSIIELKTVINNNHWGHIEYFLCDTADMDDPDGVVTQDCLNMYPLDRDETDGWNSPIDPDYPGRFFVNPECRGKNEETDQSGRPVLSGGDSGLDNGYINVGRYHLPN-IQCEHCVLQMKYYAYVGCHHPGYHEFEP-EWPGECAPDKEDWLPHKNPGCSDEGQKWGNVFFGCSDITLVADGEAPTVSEPT 822
G V+ R + N DP VLA+YG G+ W + A++KGE N NYLE D+IA HG+CGDP Q + N YST N W ++TY G ++E+K + HWGH+E+F+C+ +M+DPDG+ Q+C N YPL R E D NSPIDP+YPGR++V+P+CR ETDQ+ +P G +GY+ Y LP + C+ C+LQM YY C H GY EFEP WP CAP+K DW+ C + G + F+ C+D + DG A PT
Sbjct: 25 GPTYVKERGMVNTDPAVLAEYGDGE-WPLRWAYEKGEMAENGNYLEKDEIAKRHGICGDPEQNEEEGANFYSTPNGDWPILNTYQEGQVLEIKLGMTAYHWGHVEFFICNADEMEDPDGIANQECFNNYPLTRAEGDDENSPIDPNYPGRYYVDPKCR--EGETDQT-KP------EGAQDGYVIHASYQLPEGLTCDRCILQMNYYTGNSCKHVGYEEFEPASWPSACAPEKHDWIELDRYLCGENGS-YPEEFWACADFAITPDGMANPTPAPT 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1528.3969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1528.3969.1 >prot_Ecto-sp13_S_contig1528.3969.1 ID=prot_Ecto-sp13_S_contig1528.3969.1|Name=mRNA_Ecto-sp13_S_contig1528.3969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp GADAVQARTIDNIDPDVLADYGGGDVWIVGAAWDKGERCPNNNYLESDKIback to top mRNA from alignment at Ecto-sp13_S_contig1528:11645..16300- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1528.3969.1 ID=mRNA_Ecto-sp13_S_contig1528.3969.1|Name=mRNA_Ecto-sp13_S_contig1528.3969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4656bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:11645..16300- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1528:11645..16300- >mRNA_Ecto-sp13_S_contig1528.3969.1 ID=mRNA_Ecto-sp13_S_contig1528.3969.1|Name=mRNA_Ecto-sp13_S_contig1528.3969.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1533bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:11645..16300- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |