mRNA_Ecto-sp13_S_contig1528.3968.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI) HSP 1 Score: 773 bits (1995), Expect = 1.740e-273 Identity = 459/518 (88.61%), Postives = 465/518 (89.77%), Query Frame = 1
Query: 631 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESALPGGDSLTSSSPGRPQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGTFPVIVRRGGAVSPAKPFATANNTGGSXXXXXXXXXXXXXXXXXNASDNSDLFGWGGCGSGDPDAGLGSWDDDQGKSERTTASEGAGGDAHGSGGVDQAAADANGRKNRGKKK-TGENGGGGGVPSGKEVGGVVEGKGVASNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXEGAPRGEGFPQDDGVVPANKTKIPKRKRGKYVVNSAKKRPRD 2181
MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESA+PGGDSLTSSSPGR QQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVL+KYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEK RVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESG FPVIVRRGGA S A T XXXXXXXXXXXXXXXXX DNSDLFG GGCGSGDPD GLGSWDD++ K E+TTAS GAG AHGSGGVDQA ADANGRKNRGKKK TGE GG GGVPSG E V EGKG SNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXX V+PANK K PKRKRGKYVVNSAKKRPRD
Sbjct: 1 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESAVPGGDSLTSSSPGRLQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVRRGGAASSANSVETXXXXXXXXXXXXXXXXXXXXXXXXXXXDNSDLFGGGGCGSGDPDGGLGSWDDEERKGEKTTASAGAGDVAHGSGGVDQATADANGRKNRGKKKKTGEKGGVGGVPSGSEAEEVNEGKGSVSNGASKRGMLQPPVQKKKAAKRRAQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMPANKAKSPKRKRGKYVVNSAKKRPRD 518
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI) HSP 1 Score: 335 bits (860), Expect = 8.360e-106 Identity = 193/291 (66.32%), Postives = 213/291 (73.20%), Query Frame = 1
Query: 631 MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESALPGGDSLTSSSPG---RPQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGAR-TNVFCRARSELDDN 1491
MGKFRGHQD+S RGRE K+LKKK G A GGI A AAQAES + GGDSL S +PG + QQR VG KRKLKHVTYAKEHSVL+VGDG FSF + HRGT AGVVATSLDS KAVL+KYP+AETWLPKLEADG Q + EGR GV+GEK R+ F RVVFNFPHTGAQ THLNR+LI DFFASTKGLVKCAA GG VHVTLKDKPP+SGWN + ++ V DPSVFPGY +STTDPQA +F+A GAR TNV C ARSELDDN
Sbjct: 1 MGKFRGHQDRSWRGRENKILKKKVGVAVGGIHA-AAQAESTVSGGDSLGSGNPGHQQQQQQREAVGPKRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQARENPSRGGWRP------EGRC------GVSGEKNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGV---PGDPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDN 274
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.490e-60 Identity = 111/204 (54.41%), Postives = 139/204 (68.14%), Query Frame = 1
Query: 802 QRGVVGAKRKL-KHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTT 1410
Q + A RK+ K V+YA ++L+ GDGDFSFTRG+++HR +GAGVVATSLDS VL KYP A WL +L AD A+V H VDATRLE+ + + + LFDRVVFNFPHTG QR HLNRNL+R+FF S +G VKCA GGEVHVTLK+ PPY+GW +K A + ++ +R LAFDP+ FPGYRH +
Sbjct: 64 QSALAPAVRKVPKTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRL-AD-AKVLHGVDATRLEQAV-------------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWEIKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: G4YGB3_PHYSP (DUF2431 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB3_PHYSP) HSP 1 Score: 178 bits (452), Expect = 3.240e-47 Identity = 96/220 (43.64%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 847 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRL----EETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNV 1494
YA E VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V +KYP A+ + + + V H VDAT+L ++ GAG D F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+++ ++ F+ +FPGYRH TTDPQAKKF+ T VF RS++ + V
Sbjct: 40 YAAEDDVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESQVRKKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGMKAVPD-------------FFKYIVFNFPHSGQQRVHINRALLLNFFGSARDRL---TAHGEAHVTLKTRPPYSNWFIEDQAKDAGFVLKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRSKVRNRV 243
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: F0W3R3_9STRA (Uncharacterized protein AlNc14C14G1639 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3R3_9STRA) HSP 1 Score: 176 bits (447), Expect = 2.320e-46 Identity = 93/205 (45.37%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 847 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 1461
Y K S+LIVGDGDFSF++ ++ G ++ATS D EKAV +KY A++ + ++ GA V H VDAT+L++TL V G K LFD V+FNFPHTG QR HLNRNL+RDFF S + ++ GEVH+TLK++PPYS W ++ AR+S ++ FD ++PGY+H TTDP AK F+ T +F
Sbjct: 28 YTKGSSILIVGDGDFSFSKALLSICECGQRLIATSFDDEKAVFEKYANAKSCIQYIKTHGAYVLHRVDATQLDQTLW-------------RVNGLTK--LFDYVIFNFPHTGQQRVHLNRNLLRDFFQSARTILTPL---GEVHITLKNRPPYSNWQIEKFARDSHYLLKARQKFDSRLYPGYQHRTTDPLAKFFETELCTTYIF 214
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: A0A225WPB9_9STRA (DUF2431 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPB9_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.330e-46 Identity = 95/224 (42.41%), Postives = 132/224 (58.93%), Query Frame = 1
Query: 823 KRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRL----EETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSEL 1482
K++ YA + +VL++GDGDFSF+RG+++HRGTG GV+ATS DSE V KYP A+ + + + V H VDAT+L ++ GAG D F +VFNFPH+G QR H+NR L+ +FF S + + A GE HVTLK +PPYS W ++ A+ + +M F+ +FPGYRH TTDPQAKKF+ T VF R+++
Sbjct: 26 KQEASTQVYAADDTVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESKVRSKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGLKPVPD-------------FFHYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TAQGEAHVTLKTRPPYSNWFIEEQAKAAGFVMKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRAKV 233
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.910e-46 Identity = 89/225 (39.56%), Postives = 128/225 (56.89%), Query Frame = 1
Query: 847 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGTFPVI 1521
Y + +L++GDGDF+F++G++ HRG+G ++ATS DS AV KY A T + + A V H +DAT+L++ V + LFD ++FNFPH+G QR H+NR L+ DFF S + +K GEVH++LK+KPPYS WNV+ A+ S ++ F +FPGY H TTDP AKKF+A T VF RS ++ P++
Sbjct: 33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIRQAKAHVLHDIDATKLDQL----------------VHNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRSRYPVPTEQPPKTPLV 238
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT) HSP 1 Score: 174 bits (442), Expect = 3.700e-46 Identity = 100/227 (44.05%), Postives = 133/227 (58.59%), Query Frame = 1
Query: 808 GVVGAKRKLKHVT-------YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVF 1461
G GAKR+ +H T YA + +VL++GDGDFSF+RG+++HR TG GV+ATS DSE V +KYP A+ + + + V H VDAT+L E G G K + F +VFNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+ + +M FD +FPGYRH TTDPQAKKF+A T VF
Sbjct: 17 GNSGAKRQ-RHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTGTG-----------LKTIPDFFQYIVFNFPHSGQQRVHINRALLLNFFESARDRL---TVRGEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVF 228
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE) HSP 1 Score: 178 bits (451), Expect = 3.990e-46 Identity = 95/211 (45.02%), Postives = 128/211 (60.66%), Query Frame = 1
Query: 847 YAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSE 1479
YA + +VLIVGDGDFSF+RG+++HRGTG G++ATS DS+ V KY A + +++ V H VDAT+L E G G + +F ++FNFPH+G QR H+NR L+ +FF S + + + GEVHVTLK +PPYS W V+ A+E+ ++ FD +FPGYRH TTDPQAKKFD T VF RS+
Sbjct: 39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLELPQHVQTGTGS---------KTISDVFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---SVHGEVHVTLKTQPPYSNWFVEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLDLCVTFVFVVNRSK 237
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Match: A0A3R7WIN5_9STRA (DUF2431 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7WIN5_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.090e-46 Identity = 102/238 (42.86%), Postives = 137/238 (57.56%), Query Frame = 1
Query: 772 LTSSSPGRPQQRGVVGAKRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLQKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGGVAGEKKRV--LFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSE 1479
LT S G +R ++K YA + +VL++GDGDFSF+RG+I+HRGTG GV+ATS DSE V +KYP A+ + ++A V H VDAT+L E G G K V F ++FNFPH+G QR H+NR L+ +FF S + + GE HVTLK +PPYS W ++ A+++ +M FD +FPGYRH TTDPQAK F+ T VF RS+
Sbjct: 15 LTGSRLGSNTKRQRQDIQKKTLTQVYAPDDAVLVLGDGDFSFSRGLIKHRGTGRGVLATSFDSENEVRRKYPNAQECIAAVQAAHGLVLHDVDATKLLELPRHLKIGTG-----------MKTVPDFFQYIIFNFPHSGQQRVHINRALLLNFFESARDRL---LVHGEAHVTLKTRPPYSNWFIEDQAKKAGFVMKDRRKFDVRLFPGYRHRTTDPQAKTFEPNLCVTYVFVVHRSK 238 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1528.3968.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1528.3968.1 >prot_Ecto-sp13_S_contig1528.3968.1 ID=prot_Ecto-sp13_S_contig1528.3968.1|Name=mRNA_Ecto-sp13_S_contig1528.3968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=518bp MGKFRGHQDKSRRGREKKLLKKKAGAAAGGIRAVAAQAESALPGGDSLTSback to top mRNA from alignment at Ecto-sp13_S_contig1528:4970..9585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1528.3968.1 ID=mRNA_Ecto-sp13_S_contig1528.3968.1|Name=mRNA_Ecto-sp13_S_contig1528.3968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4616bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:4970..9585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1528:4970..9585+ >mRNA_Ecto-sp13_S_contig1528.3968.1 ID=mRNA_Ecto-sp13_S_contig1528.3968.1|Name=mRNA_Ecto-sp13_S_contig1528.3968.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1554bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1528:4970..9585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |