mRNA_Ecto-sp13_S_contig15275.3966.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: D8LT20_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT20_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 1.330e-153 Identity = 257/278 (92.45%), Postives = 259/278 (93.17%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATVRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKRFNGLLSGASGGSSGSDAGR 834
GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAV FVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLAT+RQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLA RAS+RFNGLLSG SG DAGR
Sbjct: 91 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAV------------FVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASERFNGLLSGGSGXXXXRDAGR 356
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A6H5KBP7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP7_9PHAE) HSP 1 Score: 440 bits (1131), Expect = 1.070e-145 Identity = 254/269 (94.42%), Postives = 256/269 (95.17%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATVRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKRFNGLLSGASG 807
GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAV FVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSD+PLAT+RQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLA RASKRFNGLLSGASG
Sbjct: 641 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAV------------FVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDNPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASKRFNGLLSGASG 897
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA) HSP 1 Score: 177 bits (450), Expect = 9.020e-47 Identity = 116/271 (42.80%), Postives = 163/271 (60.15%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYS---EDGK----FLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVS----DDPLATVRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKRF 780
G+ALTGDPDY+IV+EAYP+VTR+I +DDSP L+RAL+DILYS DG RL+ LL+YA G A + FVDFD++PST A L++ + FLL + AR LR ALVGE ++A DLVLR+ TR+ + R + LL+PPP P PVP+ ++DALSP+L++EE++F SL +L AL G++ + + P +R+LL S + A EL+EF RT+ DS + FD + + N R +R+
Sbjct: 525 GIALTGDPDYKIVLEAYPYVTRRITTDDSPLLRRALQDILYSGSTADGTAAPALSITRLANLLTYAMGNTDAAAG---------GGPVFVDFDSVPSTGAKLNEVMGFLLGDSARSLRKALVGEIASATDLVLRQTTRRGLSRLEALLQPPP--LPFLPRLPSLPLPVPKRLLDALSPQLSIEEEVFAKSLTDLGLALLGVDADSAAALDNGRPDVLLRKLL---STDNSSAQELLEFARTVQADSPQ----FDAHGKRILNPLERTERRY 777
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A5B8MWJ3_9CHLO (Putative UbiB-like protein kinase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MWJ3_9CHLO) HSP 1 Score: 134 bits (338), Expect = 6.230e-32 Identity = 100/276 (36.23%), Postives = 149/276 (53.99%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTR----QAVVRAKDL-LRPPP-----PXXXXXXXXXXXPFPVPESVVDA-LSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATVRQLLQAGS-DGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKRFNGLL 792
G+AL G+P+YRIVME+YPFV+RK++SDD PA Q+AL +ILYS+D ++RL+VLL+ A G+VA + FVD D +P + + +++QF EEA LR L E +NAAD +LR+ R Q + A L PPP P P +P S A L+P LT +E+I+ S+ +LA L+G++ + DP TVR L+ G DG+ +L+ L G+ F +E++ L+ R + R G++
Sbjct: 557 GIALIGNPNYRIVMESYPFVSRKLLSDDRPAFQQALTEILYSKDQTLKSQRLAVLLNSAQGIVAETDS-------------FVDLDAIPENSMNTVESVQFFFGEEAFGLRNTLQPEITNAADFLLRQAIRRVSTQVEIAAPRLPFLPPPESVPVPFVTFGANGMPQPALLPLSKATAILAPPLTQDEEIYALSMLDLANDLSGLDVKGLFMDPFETVRALVSGGRLDGALFGNDLLSL--ELQGEDRARAEAF--ATEILNQLSERYTARLTGVV 815
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: K8EHT4_9CHLO (Protein kinase domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHT4_9CHLO) HSP 1 Score: 133 bits (335), Expect = 1.660e-31 Identity = 93/220 (42.27%), Postives = 122/220 (55.45%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILY---SEDGKFL-AKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLL-RPP------PPXXXXXXXXXXXP----------FPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTV 597
G+AL G+PDY++VMEAYPFV RK++SDD PA QRAL+++LY S G L +RL+V+L+ A G+VA S FVD +TLP AASL Q+L+++L A LR LV EA AAD++ R+ R+ V RA L+ RPP PP P F P V+D +PKLT EE++F SL +L L G TV
Sbjct: 595 GIALLGNPDYKLVMEAYPFVARKLLSDDRPAAQRALQEVLYASTSAGGSILKGERLAVMLNSAMGIVAETSDT------------FVDLETLPEDAASLKQSLKYVLTPRAESLRKVLVKEAIAAADVLARQALRKTVTRAFALIPRPPSWLPFQPPNPEDIEGPILLPSRGNSTPVPAFASPRRVLDLTAPKLTREEELFAISLGDLVGGLVGKNAATV 802
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A7S3VU42_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VU42_DUNTE) HSP 1 Score: 128 bits (322), Expect = 8.500e-30 Identity = 97/267 (36.33%), Postives = 141/267 (52.81%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPP-PXXXXXXXXXXXPFPVP-------ESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATVRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKR 777
G+AL+GDP Y++V +AYPFV RK++ +DS + L+DIL+ DGK RL LL+ G VA F+D D +P AS+S+ + FLL+ EAR LR LV E SN DL LR R+A LL PP P XXXXXXXXXP +P + V+ L+P L E ++L SL EL L G+ + ++++ +LQ ++ S E+ + + T+ G+ E + + +VV LA + +R
Sbjct: 526 GIALSGDPQYQMVAQAYPFVVRKVLRNDSNSSMALLQDILFDNDGKVKPTRLGALLNAGLGYVA----------DAKQSAGFIDIDAVPDDGASVSEVVAFLLSPEARELRPLLVREISNGLDLFLRDRFRKAYALLPGLLAPPRLPFLXXXXXXXXXPVFLPGIGLIAADEAVEKLAPPLNSAEQVYLVSLMELTANLLGVSVAELESPTASSIQGMLQMATNPSEQVQEIGDALNTMSGNRANLEVVQAIVLDVVNTLASKQEER 782
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A7S1ENC3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S1ENC3_9CHLO) HSP 1 Score: 126 bits (317), Expect = 8.630e-30 Identity = 88/222 (39.64%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSED---GKFL-AKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPP---------PXXXXXXXXXXXP----------FPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTV 597
G+AL G+PDY++VMEAYPFV RK++ +D PA QRAL+++LY+ G L +RL+V+L+ A G+VA V FVD +TLP AASL Q+L++L+ EA LR L EA AADL+LR+ R+ V R L PP P P F P V++ +PKL+ EE++F SL +LA L G + TV
Sbjct: 146 GIALLGNPDYKLVMEAYPFVARKLLREDRPAAQRALQEVLYASTQGGGSILQGQRLAVMLNSAMGIVARSEDV------------FVDLETLPEDAASLEQSLKYLMQPEAASLRNLLEREAETAADLLLRQSIRKGVTRIFAQLPKPPAWLPFASSLPNPQDISGPVLLPVSGSSTPVPTFASPAQVLELAAPKLSREEELFAISLGDLAAGLVGKDAATV 355
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: C1MV80_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MV80_MICPC) HSP 1 Score: 124 bits (311), Expect = 2.450e-28 Identity = 86/227 (37.89%), Postives = 121/227 (53.30%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSED---GKFL-AKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPP------PXXXXXXXXXXXPFPV------------------PESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTV 597
G+AL G+PDYR+VMEAYPFV RK++ +D PA QRAL+++LY+ G L +RL+V+L+ A GVVA D + FVD DT+P + SL +++LL+E A LR L EA AAD++LR+G R++ R L PP P P P+ P V+DA++P+LT EE++F SL +LA G + V
Sbjct: 440 GIALIGNPDYRLVMEAYPFVARKLLREDRPAAQRALQEVLYASTVGGGNILQGQRLAVMLNSAMGVVARDQS----------EGAFVDLDTIPEDSISLETGVRYLLSERAESLRKVLEREAIGAADVLLRQGARKSGGRIIAALPQPPSLPFDLPFVGKLPKPEDLPGPILVPRSAASGLPPTPALASPNEVLDAIAPRLTREEELFAISLTDLARGSLGDDAAVV 656
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: A0A250XDH8_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDH8_9CHLO) HSP 1 Score: 124 bits (311), Expect = 2.480e-28 Identity = 85/220 (38.64%), Postives = 115/220 (52.27%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPF--------PVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATVRQLLQ 636
G+AL GDPDY++V +AYPFV RKI+ +DS LRDILY +GK R+S LL+ A G V++ S FVDFD++P A++ + LQFLL+ EA+ LR LV + + DL+LR R+ L P P P PVPE++ D L+P L EE +FL SL EL+ +L G+ D V QLL+
Sbjct: 522 GIALAGDPDYQMVTQAYPFVVRKILRNDSTGTGGLLRDILYDNEGKVKPTRMSALLNAALGYVSSKSE------------GFVDFDSIPDEGATVQEVLQFLLSPEAKDLRPLLVSQLVSGLDLLLRDRVRKLYNVTLPALVPRLPFFGAIPTPPLPPLLVPGLGFMPVPEAL-DLLAPPLAPEEGVFLNSLTELSASLTGLSLSDFEDPEPQRVIQLLR 728
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Match: L1IPB2_GUITC (Protein kinase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPB2_GUITC) HSP 1 Score: 123 bits (309), Expect = 4.280e-28 Identity = 94/279 (33.69%), Postives = 138/279 (49.46%), Query Frame = 1
Query: 1 GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVXXXXXXXXXXXXFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPP------------PXXXXXXXXXXXPFPV---PESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSD-----DPLATVRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLAGRASKR 777
GVAL GDP Y +VMEAYPFV RK++ +D P +QRAL+++LY+ G RLSVLL+ A GVVA F+DFD++P L + +++LL+++AR LR L E NAAD++LR+ R+ + L PP P P PV P+ +++ ++PKLT EE+++ SL +L + G + T+ DP A R LL S G LPG S + D +++ L G + +R
Sbjct: 436 GVALIGDPSYGLVMEAYPFVARKLLREDRPEVQRALQEVLYAGGG-LKTSRLSVLLNGALGVVARTQG-----------GAFIDFDSIPEEGVPLEEAIKYLLSDKARSLRNILADEVENAADVLLRQSLRKGFSAFLNNLPRPPFISSFLPSPETVPTMFLLPTASGTPQPVLRPPQELLEVVAPKLTREEELYAISLVDLIKSALGEDAATLVAGDALVDPRAASRLLLSVVSTGK------------LPGWSSLPAPLADALKQLLTVLNGGSVRR 690 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15275.3966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15275.3966.1 >prot_Ecto-sp13_S_contig15275.3966.1 ID=prot_Ecto-sp13_S_contig15275.3966.1|Name=mRNA_Ecto-sp13_S_contig15275.3966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp GVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKback to top mRNA from alignment at Ecto-sp13_S_contig15275:636..4204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15275.3966.1 ID=mRNA_Ecto-sp13_S_contig15275.3966.1|Name=mRNA_Ecto-sp13_S_contig15275.3966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3569bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15275:636..4204- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15275:636..4204- >mRNA_Ecto-sp13_S_contig15275.3966.1 ID=mRNA_Ecto-sp13_S_contig15275.3966.1|Name=mRNA_Ecto-sp13_S_contig15275.3966.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15275:636..4204- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |