prot_Ecto-sp13_S_contig15243.3949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15243.3949.1
Unique Nameprot_Ecto-sp13_S_contig15243.3949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length480
Homology
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: D8LMZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ8_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 4.730e-233
Identity = 366/473 (77.38%), Postives = 387/473 (81.82%), Query Frame = 0
Query:    1 MAIKRIMMLGSLAFIACCPIANSFVFRFSPVQHTFNTNSMLGRKQRGEVGKTIGVPSGETIDGAGVGRTSGAVAIEEKVRIPRVPSALDPEGTTRRVDSPLHLLGKGGDGEGVPMPHGEEFVPVVREREKPQSHNDHDD-THQQQLIQQDEAVEDELERWLHHH--GSRPRGRYRGWTVRWEGFQRHCCTSGLSGLRSTSPTGAGAGDGFCSICDIEHTQHEAAAATTGAVGYPDSAASTSSGISEPWSDTKSVPVESRSIDKYRITSIAESSEVTNNHSRHGLEMAEGSSELPSRAVDARPLLKRVEPIKDDKSSAPTHDGSSPAHTRIAREAASDGQGHDRKWVGRS--HEDTGRSFFSLHLQQFDGPGDFNQGPSLTFPYFPAEIPPPPVQPGATPAATAAAGHGTASRCTPPPQTTDSAAEAPAEEPPDCVDMLTAALHDAWGRGAVRGTSNEPAQDGTTAARQSSAWW 468
            M IKRIMML + AF+ACCPIANSFV+R S  ++TFNTNSMLGRKQRGEVGKTI VPSG+TIDGAGVGR+SGAVAIEEKVRIPRVPSALDPEG TRRVDSPLH+LGKGGDGEGVP+PH EEFVPVVRE  K  S+ DH D THQQ                      GSRPRGRY GWTVRW+GFQRH   SGLSGLRSTSPTG G GDG CSICD EHT +EAAA TTG VGY D A+ TS GI    SD KSVPVESRS +KY   +I ESSEV NNHSRHGLE A+ S ELPS AVDAR L KRVEPI+DDKSSAPTHDGSSPAHTRIAREA SDGQGHDRK VGRS  HEDTGRSFFSLHLQQFDGP DFNQGPSLTFPYFPAEIPPPPVQ GATPAATAA G+GTASR TPP  TT+S AEAPAEE PD VDMLTAALHDAWGRG +RGTS+ P QDGTTAARQSSAWW
Sbjct:    1 MMIKRIMMLAAWAFVACCPIANSFVYRSSVQRNTFNTNSMLGRKQRGEVGKTIEVPSGKTIDGAGVGRSSGAVAIEEKVRIPRVPSALDPEGITRRVDSPLHILGKGGDGEGVPVPHEEEFVPVVREGAKSPSNGDHHDVTHQQXXXXXXXXXXXXXXXXXXXXXXGSRPRGRYPGWTVRWKGFQRHRYRSGLSGLRSTSPTGPGVGDGLCSICDKEHTPNEAAAPTTGQVGYHDPASETSLGICT--SDMKSVPVESRSTEKYGTATIVESSEVANNHSRHGLEKAKASLELPSCAVDARSLQKRVEPIQDDKSSAPTHDGSSPAHTRIAREAVSDGQGHDRKKVGRSYPHEDTGRSFFSLHLQQFDGPEDFNQGPSLTFPYFPAEIPPPPVQSGATPAATAATGYGTASRSTPPDPTTNSPAEAPAEESPDYVDMLTAALHDAWGRGTIRGTSHLPTQDGTTAARQSSAWW 471          
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: D8LMZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ0_ECTSI)

HSP 1 Score: 503 bits (1295), Expect = 2.350e-174
Identity = 279/374 (74.60%), Postives = 297/374 (79.41%), Query Frame = 0
Query:    1 MAIKRIMMLGSLAFIACCPIANSFVFRFSPVQHTFNTNSMLGRKQRGEVGKTIGVPSGETIDGAGVGRTSGAVAIEEKVRIPRVPSALDPEGTTRRVDSPLHLLGKGGDGEGVPMPHGEEFVPVVREREKPQSHNDHDDTHQQQLIQQDEAVEDELERWLHHH---GSRPRGRYRGWTVRWEGFQRHCCTSGLSGLRSTSPTGAGAGDGFCSICDIEHTQHEAAAATTGAVGYPDSAASTSSGISEPWSDTKSVPVESRSIDKYRITSIAESSEVTNNHSRHGLEMAEGSSELPSRAVDARPLLKRVEPIKDDKSSAPTHDGSSPAHTRIAREAASDGQGHDRKWVGRS--HEDTGRSFFSLHLQQFDGPGDFN 369
            M IKRIMML + AF+ACCPIANSFV+R S  ++TFNTNSMLGRKQRGEVGKTI VPSG+TIDGAGVGR++GAVAIEEKVRIPRVPSALDPEG TRRVDSPLH+LGKGGDGEGVP+PH EEFVPVVRE  K  S+ D  D  Q                        GSRPRGRY GWTVRW+GFQRH   SGLSGLRSTSPTG G GDG CSICDIEHT +EAAA TTG VGY D A+ TS GI    SD KSVPVESRS +KY   +IAESSEV NNHSRHGLE A+ S ELPS AVDAR L KRVEPI+DDKSSAPTHDGSSPAHTRIAREA SDGQGHDRK VGRS  HEDTGRSFFSLHLQQFDGP DFN
Sbjct:    1 MMIKRIMMLAAWAFVACCPIANSFVYRSSVQRNTFNTNSMLGRKQRGEVGKTIEVPSGKTIDGAGVGRSNGAVAIEEKVRIPRVPSALDPEGITRRVDSPLHILGKGGDGEGVPVPHEEEFVPVVREGAKSSSNGDQHDVTQXXXXXXXXXXXXXXXXXXXXXXXXGSRPRGRYPGWTVRWKGFQRHRYRSGLSGLRSTSPTGPGVGDGLCSICDIEHTPNEAAAPTTGQVGYHDPASETSLGICT--SDMKSVPVESRSTEKYGTATIAESSEVANNHSRHGLEKAKASLELPSCAVDARSLQKRVEPIQDDKSSAPTHDGSSPAHTRIAREAVSDGQGHDRKKVGRSYPHEDTGRSFFSLHLQQFDGPEDFN 372          
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: A0A6H5JTQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ0_9PHAE)

HSP 1 Score: 503 bits (1296), Expect = 2.490e-161
Identity = 270/327 (82.57%), Postives = 281/327 (85.93%), Query Frame = 0
Query:  156 LERWLHHHGSRPRGRYRGWTVRWEGFQRHCCTSGLSGLRSTSPTGAGAGDGFCSICDIEHTQHEAAAATTGAVGYPDSAASTSSGISEPWSDTKSVPVESRSIDKYRITSIAESSEVTNNHSRHGLEMAEGSSELPSRAVDARPLLKRVEPIKDDKSSAPTHDGSSPAHTRIAREAASDGQGHDRKWVGRS--HEDTGRSFFSLHLQQFDGPGDFNQGPSLTFPYFPAEIPPPPVQPGATPAATAAAGHGTASRCTPPPQTTDSAAEAPAEEPPDCVDMLTAALHDAWGRGAVRGTSNEPAQDGTTAARQSSAWWPSEEAGADADDL 480
            +ER LHHHGSRPRGRY GWTVRWEG QR+CC SGLS LRSTSP GAG GDGFCSICDIEHT HEAAA TTGAVGYPDSAAS+S GIS P SDTKSV VESRS +KY IT+IAESS   NNHS H LE  +GSSELPSR VDAR L KRVEPI+DDKSSAP HDGSSPAH RIAREA SDGQGHDRK VGRS  HEDTGRSFFSL LQQFD P DFNQGPSLTFPYFP EI  PPVQPGA P ATAAAGHGT+SR TPPP+TTDSAAEAPA E PD VD+LTAALHDAWGRGA+RGTSNEPAQDGTTAARQSSAWW  EEAG DADDL
Sbjct:  994 VERRLHHHGSRPRGRYPGWTVRWEGVQRYCCRSGLSRLRSTSPAGAGVGDGFCSICDIEHTPHEAAAPTTGAVGYPDSAASSSLGISGPSSDTKSVAVESRSTEKYGITAIAESSGANNNHSHHALEKTKGSSELPSRVVDARSLQKRVEPIQDDKSSAPMHDGSSPAHIRIAREAVSDGQGHDRKRVGRSYRHEDTGRSFFSLQLQQFDAPEDFNQGPSLTFPYFPEEISRPPVQPGAIPPATAAAGHGTSSRSTPPPRTTDSAAEAPAGESPDYVDILTAALHDAWGRGAIRGTSNEPAQDGTTAARQSSAWWHPEEAGVDADDL 1320          
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: A0A6H5JPB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB1_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 5.820e-61
Identity = 103/124 (83.06%), Postives = 113/124 (91.13%), Query Frame = 0
Query:    1 MAIKRIMMLGSLAFIACCPIANSFVFRFSPVQHTFNTNSMLGRKQRGEVGKTIGVPSGETIDGAGVGRTSGAVAIEEKVRIPRVPSALDPEGTTRRVDSPLHLLGKGGDGEGVPMPHGEEFVPV 124
            M IKRIM+LG+ AF+ACCPIANSFV+RFSP+QHTFNTNSMLGRKQRGEVGKTIGVPSG+TIDGAGVGR+SGAVAIEEK+RIPRVPSALDPEG TRRVDSPLH+LGKGGDGE   M  G+E  P 
Sbjct:    3 MMIKRIMILGAWAFVACCPIANSFVYRFSPMQHTFNTNSMLGRKQRGEVGKTIGVPSGKTIDGAGVGRSSGAVAIEEKLRIPRVPSALDPEGITRRVDSPLHILGKGGDGEDEAMEDGDEDAPT 126          
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: A0A6H5JJF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF2_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 4.040e-51
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0
Query:    1 MAIKRIMMLGSLAFIACCPIANSFVFRFSPVQHTFNTNSMLGRKQRGEVGKTIGVPSGETIDGAGVGRTSGAVAIEEKVRIPRVPSALDPEGTTRRVDSPLHLLGKGGDGEGV 113
            M IKRIMML + A IACCPIANSF++R S VQHTFNTNSMLGRKQRGEVGKT   PSG+T++GAGVGR+SGAVAIEEKVRIPRVPS LDPE  TRRVDSP H+LGKGGDGE +
Sbjct:    3 MMIKRIMMLAAWALIACCPIANSFIYR-SSVQHTFNTNSMLGRKQRGEVGKTTAAPSGKTVEGAGVGRSSGAVAIEEKVRIPRVPSTLDPERVTRRVDSPFHILGKGGDGEAI 114          
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Match: A0A6H5JJM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM1_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.150e-19
Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 0
Query:  424 EEPPDCVDMLTAALHDAWGRGAVRGTSNEPAQDGTTAARQSSAWWPSEEAGADADDL 480
            EE PDCVDM TAALHDAWGRGA+ GTS+ P +DGTTAARQSSAWWPSEEAG  ADDL
Sbjct:   34 EESPDCVDMSTAALHDAWGRGAIWGTSHVPPRDGTTAARQSSAWWPSEEAGVHADDL 90          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15243.3949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LMZ8_ECTSI4.730e-23377.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMZ0_ECTSI2.350e-17474.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTQ0_9PHAE2.490e-16182.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPB1_9PHAE5.820e-6183.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJF2_9PHAE4.040e-5179.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJM1_9PHAE1.150e-1982.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..480
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..23
score: 0.545

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15243contigEcto-sp13_S_contig15243:763..4216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15243.3949.1mRNA_Ecto-sp13_S_contig15243.3949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15243 763..4216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15243.3949.1 ID=prot_Ecto-sp13_S_contig15243.3949.1|Name=mRNA_Ecto-sp13_S_contig15243.3949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=480bp
MAIKRIMMLGSLAFIACCPIANSFVFRFSPVQHTFNTNSMLGRKQRGEVG
KTIGVPSGETIDGAGVGRTSGAVAIEEKVRIPRVPSALDPEGTTRRVDSP
LHLLGKGGDGEGVPMPHGEEFVPVVREREKPQSHNDHDDTHQQQLIQQDE
AVEDELERWLHHHGSRPRGRYRGWTVRWEGFQRHCCTSGLSGLRSTSPTG
AGAGDGFCSICDIEHTQHEAAAATTGAVGYPDSAASTSSGISEPWSDTKS
VPVESRSIDKYRITSIAESSEVTNNHSRHGLEMAEGSSELPSRAVDARPL
LKRVEPIKDDKSSAPTHDGSSPAHTRIAREAASDGQGHDRKWVGRSHEDT
GRSFFSLHLQQFDGPGDFNQGPSLTFPYFPAEIPPPPVQPGATPAATAAA
GHGTASRCTPPPQTTDSAAEAPAEEPPDCVDMLTAALHDAWGRGAVRGTS
NEPAQDGTTAARQSSAWWPSEEAGADADDL
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