mRNA_Ecto-sp13_S_contig15239.3945.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: D8LII4_ECTSI (ATP phosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LII4_ECTSI) HSP 1 Score: 236 bits (603), Expect = 9.100e-76 Identity = 123/142 (86.62%), Postives = 125/142 (88.03%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
ELGFGKC+LCVQAPVSAGI DVKTLSGKRIVTSFPAVCK+FFDQYDTPDNPT IKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGK TKHREMVDLIVRRIEGYITAEK
Sbjct: 100 ELGFGKCRLCVQAPVSAGITDVKTLSGKRIVTSFPAVCKAFFDQYDTPDNPTK--------------IKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKGTKHREMVDLIVRRIEGYITAEK 227
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A835Z6A7_9STRA (ATP phosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A7_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.220e-52 Identity = 95/142 (66.90%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
ELGFGKC+LCVQAPV++ IKDV L+GKRIVTSFP + K FFDQ+ D T IKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEV+ SQ +LI K T HR++V+ I RRIEG+ITAE+
Sbjct: 100 ELGFGKCRLCVQAPVTSAIKDVSVLAGKRIVTSFPHLTKKFFDQFGD-DKETK--------------IKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVVASQTVLIANKSTPHRQLVERITRRIEGHITAER 226
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A1E7FBF6_9STRA (ATP phosphoribosyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBF6_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.750e-47 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
ELGFGKCKLCVQAPV+ I DV++L+GKRIVTSFP + K FF YD +KL + I YVSGSVEAACGLGLADAVVDLVETGTTM+AAGLEVV +++ +Q +LI ++H+++V + RRIEGYIT+ K
Sbjct: 94 ELGFGKCKLCVQAPVTDNITDVESLAGKRIVTSFPDITKQFFQTYD-------------EKLGVTTNINYVSGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVHDILSTQAVLISNPHSEHKDLVAKLQRRIEGYITSRK 222
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A6U0IWG0_9STRA (ATP phosphoribosyltransferase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IWG0_9STRA) HSP 1 Score: 163 bits (413), Expect = 3.400e-47 Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKCKLCVQAPV+ I DV TL+G RIVTSFP + K FF D ++ +K+VSGSVEAACGLGLADAVVDLVETGTTM+AAGLEVVAE+++++ +LI ++H+++VDLI RR++GYITA+K
Sbjct: 94 DLGFGKCKLCVQAPVAKNITDVSTLAGGRIVTSFPDMTKEFFGPIDEEKGVETK-------------VKFVSGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVAEILETEAILISNPHSEHKDLVDLIKRRVDGYITAQK 222
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A397AI08_9STRA (ATP phosphoribosyltransferase n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AI08_9STRA) HSP 1 Score: 162 bits (411), Expect = 3.570e-47 Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 1
Query: 13 PQQELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYG---IKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
P LGFGKC L VQAPV++GI D L+GKRIVTSFP V + +F Q++ P PT ++ LH+++ IKYV GSVEAACGLGLAD +VDLVETGTTMKAAGLE+V+ +M ++ +LI +TKH ++V I +R+ G++ A+K
Sbjct: 50 PLDNLGFGKCSLSVQAPVASGITDPSVLAGKRIVTSFPNVAREYFKQFEVPGKPTRTSSIASWSLHIYHARVDIKYVGGSVEAACGLGLADGIVDLVETGTTMKAAGLEIVSNIMKTEAVLISNPNTKHGKLVTKIHQRLLGFLFAQK 197
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A6S9HQJ8_9STRA (ATP phosphoribosyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9HQJ8_9STRA) HSP 1 Score: 162 bits (411), Expect = 6.620e-47 Identity = 85/142 (59.86%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKCKLCVQA V+ + DVKTL+G RIVTSFP + +++FDQ+D ++L + +K+VSGSVEAACGLGLADAVVDLVETGTTM+AAGLEVVA+V+ +Q +LI + + H E+V+ I RRIEGYITA K
Sbjct: 93 DLGFGKCKLCVQAQVAKEVTDVKTLAGGRIVTSFPHLTRTYFDQFD-------------KELGVETKVKFVSGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVADVLTTQAILIANRHSDHIEIVERIKRRIEGYITATK 221
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A448YUM5_9STRA (ATP phosphoribosyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUM5_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.870e-46 Identity = 83/142 (58.45%), Postives = 105/142 (73.94%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKC+L VQAPV+ I+DV L+GKRI TSFP + K FFD+YD +KL + I+Y+SGSVEAACGLGLADAVVDLVETGTTM+AAGLEVV +++ +Q LI +++H+++V I RRIEGYITA K
Sbjct: 94 DLGFGKCRLSVQAPVADKIEDVTALAGKRIATSFPNLTKKFFDEYD-------------EKLGVSTSIQYISGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVHDILSTQATLISNPNSEHKDLVTKIQRRIEGYITATK 222
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: B7FST0_PHATC (ATP phosphoribosyltransferase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FST0_PHATC) HSP 1 Score: 159 bits (403), Expect = 1.110e-45 Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKCKLCVQ P I DV TL+GKRIVTSFP + K FF +D +L + +K+VSGSVEAACGLGLAD +VDLVETGTTM+AAGLEVVA+++ +Q +LI TKH +++ LI RR+EGYITA K
Sbjct: 94 DLGFGKCKLCVQVPSDDNITDVSTLAGKRIVTSFPELTKQFFQPFD-------------DELGVETKVKFVSGSVEAACGLGLADGIVDLVETGTTMRAAGLEVVADIISTQAMLIANTHTKHIDIIHLIKRRLEGYITATK 222
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: B8C4E1_THAPS (ATP phosphoribosyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4E1_THAPS) HSP 1 Score: 158 bits (399), Expect = 3.990e-45 Identity = 81/142 (57.04%), Postives = 104/142 (73.24%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKC+LCVQAPV+ GI DVK L+G RIVTSFP + K FFD D ++ + +K+VSGSVEAACGLGLADAVVDLVETGTTMKAAGL VV +++++ +LI ++ HR +V+L+ RIEGYIT++K
Sbjct: 91 DLGFGKCRLCVQAPVAKGITDVKELAGSRIVTSFPELTKKFFDPLD-------------KERGVKTSVKFVSGSVEAACGLGLADAVVDLVETGTTMKAAGLGVVETILNTEAILITNPNSSHRSIVNLLKHRIEGYITSKK 219
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Match: A0A7S0F4S4_9STRA (ATP phosphoribosyltransferase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4S4_9STRA) HSP 1 Score: 158 bits (399), Expect = 5.170e-45 Identity = 83/142 (58.45%), Postives = 100/142 (70.42%), Query Frame = 1
Query: 22 ELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDQYDTPDNPTSENTFFVQKLHLFYGIKYVSGSVEAACGLGLADAVVDLVETGTTMKAAGLEVVAEVMDSQCLLIVGKDTKHREMVDLIVRRIEGYITAEK 447
+LGFGKCKLCVQAPV I DV TL+G RIVTSFP + K FF + D T+ +K+V GSVEAACGLGLADAVVDLVETGTTM+AAGLEVV E++ +Q +LI ++ H+ MV+ + RRIEGYITA K
Sbjct: 100 DLGFGKCKLCVQAPVVDDIHDVNTLAGGRIVTSFPEITKEFFKKIDAEKGTTTS-------------VKFVGGSVEAACGLGLADAVVDLVETGTTMRAAGLEVVHEILSTQAILISNPNSTHKGMVEKLKRRIEGYITATK 228 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15239.3945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15239.3945.1 >prot_Ecto-sp13_S_contig15239.3945.1 ID=prot_Ecto-sp13_S_contig15239.3945.1|Name=mRNA_Ecto-sp13_S_contig15239.3945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=150bp RPPPPQQELGFGKCKLCVQAPVSAGIKDVKTLSGKRIVTSFPAVCKSFFDback to top mRNA from alignment at Ecto-sp13_S_contig15239:2260..3517+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15239.3945.1 ID=mRNA_Ecto-sp13_S_contig15239.3945.1|Name=mRNA_Ecto-sp13_S_contig15239.3945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1258bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15239:2260..3517+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15239:2260..3517+ >mRNA_Ecto-sp13_S_contig15239.3945.1 ID=mRNA_Ecto-sp13_S_contig15239.3945.1|Name=mRNA_Ecto-sp13_S_contig15239.3945.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=450bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15239:2260..3517+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |