mRNA_Ecto-sp13_S_contig15235.3943.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI) HSP 1 Score: 314 bits (804), Expect = 3.580e-96 Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1
Query: 4 RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVGKCD 486
RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWA+DTV + D
Sbjct: 3160 RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWAKDTVARRD 3320
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.160e-46 Identity = 89/188 (47.34%), Postives = 121/188 (64.36%), Query Frame = 1
Query: 4 RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAF------------------------------FTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
R+ +RAL+V + T ++ RQPL FQ+S EPL+PF E++V R++GG RWR+ + + ATDA PDD+ ++A VGG +S RLCN YLG APFQA+ FT DS+LSLSVEP+DGVL PFGT+GT +TVTYAP QY+P Q+GRL+V T+D++W+ + G
Sbjct: 2626 RLAERALTVAALHTTITHARQPLLFQLSFEPLRPFTAAAELVVIRRSGG-RWRFGISLIATDAAPDDSFEIQAPVGGAASVSLRLCNCYLGCAPFQAYVFYVAXXXXXXXXXXXXXXXXXXXXXXXXXFTPDSSLSLSVEPSDGVLAPFGTEGTQLTVTYAPKQYSPGQRGRLVVCTDDVQWSYEVSG 2812
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A7S2FHQ5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHQ5_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.810e-44 Identity = 73/157 (46.50%), Postives = 113/157 (71.97%), Query Frame = 1
Query: 7 MLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
++ ++L+V PV ++DP QP++FQV+ EPL+PF T V++++ R TGG RW +E++++A D PDD I + A++ SS FRL NR+ YAPFQAFF+ DSA++L V P+ G+L P T GT TV+++PT+Y Q+GRL+++TED++W + G
Sbjct: 134 IIGKSLTVNPVEPTITDPNQPVRFQVAFEPLRPFSTSVKLVIVRGTGG-RWPFELQLDAMDPDPDDQIVIEANLRTTSSVAFRLTNRFPVYAPFQAFFSTDSAMTLQVHPSTGLLGPVDTQGTVFTVSFSPTEYGKLQRGRLVIQTEDMQWTYEVTG 289
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A1R2D3A9_9CILI (Calponin-homology (CH) domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2D3A9_9CILI) HSP 1 Score: 138 bits (347), Expect = 1.090e-34 Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 1
Query: 4 RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRW 459
R++D + + P+ LS+P + L+F V EPL+PF+TI+E ++ K+ GGRW+Y + +EA D DDTI + + + S F+L N+ +A F+AFFT +S SV PT GVL PFG +GT VT+ PT+Y + GR+I++T+D+RW
Sbjct: 2705 RLVDSSFKIEPIRNILSNPGEALEFLVRFEPLRPFKTIIEFLIY-KSSGGRWKYNILLEALDPDVDDTIIIESQINKPHSVAFKLTNQLKAFAEFEAFFTPESNSCFSVMPTKGVLEPFGREGTTFVVTFLPTEYGAAKIGRMIIQTDDMRW 2855
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A7S1CEQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEQ9_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.370e-33 Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 7 MLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
++ R+L V V T LS + L+F ++ EPL+PF E +V K GGRWRY++++ AT+ PDD I++ A + SS F L N++ YAPF+A F+ +S L+V P +GVL P GT+GT V++ P +Y G+LI+ETED+RW+ + G
Sbjct: 394 LVGRSLVVEAVHTTLSSASEALEFDITFEPLRPFSCNCEFVVN-KASGGRWRYDLRLNATEPEPDDVITVEALLHHTSSVAFNLTNQFATYAPFKASFSLESPSELTVHPEEGVLPPVGTEGTTFVVSFTPREYGKTLVGKLIIETEDMRWSYEVRG 549
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A813BR30_9DINO (CFAP47 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BR30_9DINO) HSP 1 Score: 131 bits (330), Expect = 2.410e-33 Identity = 64/154 (41.56%), Postives = 100/154 (64.94%), Query Frame = 1
Query: 7 MLDRALSVVPVTTK--LSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWA 462
++DR S+ +T L QPL+ ++ +EPLKPF E++VK K+ GGRWR+ V + ATDA PDD I++ +S+ +S F+L N++L YA F+A+FT +SA V P++G L P+G+ G TV++ P +Y G+LI+ET D++W+
Sbjct: 223 LVDRYASLTTLTQNGFLESRDQPLRLRLDMEPLKPFEVPAEIVVK-KSSGGRWRFPVLLVATDAEPDDVITIESSLNRTASVSFQLSNQFLDYADFKAYFTLESAPEFQVHPSEGTLPPYGSPGAEFTVSFTPREYGKLLSGKLIIETADMQWS 375
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A1R2CWG7_9CILI (Calponin-homology (CH) domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CWG7_9CILI) HSP 1 Score: 133 bits (335), Expect = 4.480e-33 Identity = 64/152 (42.11%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 4 RMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRW 459
R++D + + P+ L + + L+F V EPL+PF+T+VE ++ K+ GGRW+Y +++EA D DDTI + + + S F+L N+ +A F+AFFT +S SV PT GVL PFG +GT VT+ P +Y + GRLI++TED+RW
Sbjct: 2657 RLVDNSFKIDPIKNILFNTNEALEFLVRFEPLRPFKTVVEFLIY-KSSGGRWKYSIQLEALDPDVDDTIIIESQINKSHSVGFKLTNQLKAFAEFEAFFTPESNSCFSVMPTKGVLEPFGREGTTFVVTFLPNEYGAAKIGRLIIQTEDMRW 2807
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: F0XXK4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK4_AURAN) HSP 1 Score: 132 bits (332), Expect = 1.140e-32 Identity = 67/160 (41.88%), Postives = 102/160 (63.75%), Query Frame = 1
Query: 1 SRMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCN-RYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
+++++ AL V PV T+L+ LKF EPL+PF T V ++VKR TGG RW +EV+++ + PDD I + A++ + F+L N + Y PF AFF+ DSA +L+V P G+L P GT+GT V++ P +Y Q+GRLI++TED+ W+ + G
Sbjct: 3018 AKLVNSALEVRPVDTRLTAVDGELKFDAIFEPLRPFSTSVHLVVKRATGG-RWPFEVQLDVDEPDPDDAIEIEANLHTTAKVQFKLVNSNAMDYTPFNAFFSTDSAHTLTVSPAHGLLAPVGTEGTNFDVSFRPVKYGMLQRGRLIIQTEDMMWSYEVHG 3176
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A6G0XYD4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYD4_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.350e-31 Identity = 59/159 (37.11%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 1 SRMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
+R+++R L+V P+ K+S PL++ V +PLKP R V +IVK+++GG WR+++ ++A+D DD +++ +++ SS F+L N++ PFQA FTA S+ + +V P +G+L P+GTDGT T+ + PT Y G+L++ T++++W + G
Sbjct: 836 ARVVERTLTVTPIVDKISSVTTPLEYLVRFDPLKPIRLTVGLIVKKRSGG-LWRFDIHLDASDPFVDDVLTIESALNQTSSVSFKLTNQFRESTPFQAEFTAGSSQAFTVYPVEGMLAPYGTDGTSFTIAFTPTGYGKMCSGQLVIVTDEMQWTFNVKG 993
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Match: A0A024UTG8_9STRA (Calponin-homology (CH) domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTG8_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.420e-31 Identity = 57/159 (35.85%), Postives = 104/159 (65.41%), Query Frame = 1
Query: 1 SRMLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRWRYEVKVEATDAPPDDTISLRASVGGVSSAVFRLCNRYLGYAPFQAFFTADSALSLSVEPTDGVLTPFGTDGTPVTVTYAPTQYAPNQKGRLIVETEDIRWARDTVG 477
+R+++R L+V P+ +S PL++ V +PLKP R V ++VK+++GG WR+++ ++A+D DD +++ +++ SS F+L N++ PFQA FT S+ + +V P +G+L P+GT+GTP T+ + PT Y G+L+V+T++++W + G
Sbjct: 2683 ARVVERTLTVTPLVDSISSVTTPLEYLVRFDPLKPIRLAVALVVKKRSGG-LWRFDIHLDASDPVVDDVLTIESALNQTSSVSFKLSNQFREATPFQAEFTPGSSQAFTVYPVEGMLAPYGTEGTPFTIAFTPTGYGKMCSGQLVVQTDEMQWTFNVKG 2840 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15235.3943.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15235.3943.1 >prot_Ecto-sp13_S_contig15235.3943.1 ID=prot_Ecto-sp13_S_contig15235.3943.1|Name=mRNA_Ecto-sp13_S_contig15235.3943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=162bp MLDRALSVVPVTTKLSDPRQPLKFQVSLEPLKPFRTIVEVIVKRKTGGGRback to top mRNA from alignment at Ecto-sp13_S_contig15235:1857..3679+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15235.3943.1 ID=mRNA_Ecto-sp13_S_contig15235.3943.1|Name=mRNA_Ecto-sp13_S_contig15235.3943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1823bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15235:1857..3679+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15235:1857..3679+ >mRNA_Ecto-sp13_S_contig15235.3943.1 ID=mRNA_Ecto-sp13_S_contig15235.3943.1|Name=mRNA_Ecto-sp13_S_contig15235.3943.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15235:1857..3679+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |