mRNA_Ecto-sp13_S_contig15228.3938.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: D7G1I4_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I4_ECTSI) HSP 1 Score: 348 bits (894), Expect = 1.820e-116 Identity = 200/202 (99.01%), Postives = 201/202 (99.50%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGV 609
DRAAFSQRVREHI+EDLNNMGFALVSYTVNQVLDS GYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGV
Sbjct: 130 DRAAFSQRVREHIQEDLNNMGFALVSYTVNQVLDSQGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGV 331
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: D7G1I5_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I5_ECTSI) HSP 1 Score: 333 bits (853), Expect = 1.120e-110 Identity = 191/192 (99.48%), Postives = 192/192 (100.00%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA 579
DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKN+SEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA
Sbjct: 108 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNMSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA 299
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A6H5JYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR0_9PHAE) HSP 1 Score: 205 bits (522), Expect = 5.930e-64 Identity = 128/148 (86.49%), Postives = 129/148 (87.16%), Query Frame = 1
Query: 187 VSEAKKRVAENESSANMAEATYRAEAHVGV------------------AMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKAD 576
+SEAKKRVAENESSANMAEATYRAEAHVGV AMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRA AD
Sbjct: 1 MSEAKKRVAENESSANMAEATYRAEAHVGVGHVAVQGMSPSRGSFNQVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRATAD 148
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A7S1DX43_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DX43_HEMAN) HSP 1 Score: 160 bits (405), Expect = 8.270e-43 Identity = 106/212 (50.00%), Postives = 137/212 (64.62%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVGVAEAAAILAKG 639
DRAAFS+RVRE + +DL MGF LVSYTV + D GYME+LGATQT LVKREAAEG ++N +EA+K+VA+ ++ A +A A EAH+ V + DRDL IK+AA++ +VN A A A A IEK RQ Q +VR EA V L++ + +K+ EG S A L+ EKNKAEA+R A A+A +I +G AEAAA A G
Sbjct: 193 DRAAFSERVRELVHDDLKAMGFELVSYTVTHIDDENGYMESLGATQTELVKREAAEGRARNQAEARKKVAQYDADAEIATAEAAREAHIAVNQQQXXXXXXDRDLHIKQAAFETQVNKARAEAEAAGKIEKERQQQNIVRXXXXXXXXEAQVHLEITDRQVERTKKEAEGQSLAELLAEKNKAEAVRVNAQAQADQIRMIGEAEAAAKQAAG 404
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A7S2S6C3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S6C3_9STRA) HSP 1 Score: 146 bits (368), Expect = 4.590e-38 Identity = 90/186 (48.39%), Postives = 129/186 (69.35%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAI 561
+R+AFS +VREH+ EDL+ MG+ L SY V ++ D + YM++LG TQTA+VKREAAEGE+KN +EA+K+VA ++ A+ AEA AH+ V ++ E+ AA+DRDL +KKA Y EVN A A A A IE ARQ Q +VRE+TKQ E + L++ +K+ EG S A L++++N+A++I
Sbjct: 140 NRSAFSTKVREHVLEDLSAMGYGLASYVVQKIDDDSEYMQSLGVTQTAIVKREAAEGEAKNTAEARKKVAVYKAEADTAEAIEFQRAHLAVNLQKEQEAASDRDLNLKKAMYDREVNQARAEATAAGPIEDARQQQHIVRERTKQEQVEQGIKLEIADQIVERTKKEMEGASMARLLQQQNEAKSI 325
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A2R5GCP0_9STRA (Flotillin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCP0_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.170e-38 Identity = 96/197 (48.73%), Postives = 134/197 (68.02%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEI 594
+R+AFS++V+EH+ +DL MG+ L SY V QV D+ YM +LG TQTA+VKREAAEG +KN +EA+KRVA ++ A+MAEA AHV V + E A +DRDL +K+AAY EVN A+A A A IE+ARQ Q++VRE T+Q E + L++ +K+KEG S A L+EE+N A++I A A+A ++
Sbjct: 479 NRSAFSEKVKEHVLDDLRAMGYGLASYVVQQVDDANDYMVSLGVTQTAIVKREAAEGSAKNEAEARKRVAAYKADADMAEAIEFQRAHVAVNQQKEAEAESDRDLHLKRAAYDREVNQAQAEAESAGPIEEARQQQSIVRENTRQLQVEESIKLEIADQIVERTKKEKEGESLARLLEEQNHAKSITVIAKAEADKV 675
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A7R9SVU7_9CHLO (Flotillin-like n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVU7_9CHLO) HSP 1 Score: 144 bits (364), Expect = 1.590e-37 Identity = 93/201 (46.27%), Postives = 132/201 (65.67%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVG 606
DRAAFS+RVREH+ EDL ++G L SYTV + D GYM+ALGAT T+ VKREA EG ++NV+EAKK V+ + A +AEA AH A++ + A ADRDL +K++ Y +EVN A A A IE+A Q + V+RE T+Q+ EEA V+L V + + + G S+A L+E++N A++I A+A+A I ++G
Sbjct: 130 DRAAFSERVREHVVEDLKSLGITLASYTVTNIGDENGYMDALGATATSAVKREAEEGTARNVAEAKKVVSRTMADAAVAEAEAMKMAHNAKALQGQAMAEADRDLELKRSRYASEVNKAREEAEAATRIERAIQNKAVIRETTQQQVEEAQVLLLVTEQQVARQKAELAGASEAKLLEQRNIAKSIEVAAEAEAGRIRRLG 330
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A7S3LS19_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LS19_9STRA) HSP 1 Score: 139 bits (349), Expect = 3.310e-35 Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADA 579
DR AFS VR+H+ +DL +MGF LVSYTVN + D++ YM +LG TQTA+VKREAAEG+++N SEAKK+VAE + A +AEA EAHV VA + KKA+++ EVN A A A A IE ARQGQ V+RE+T+Q E + LD+ +K+KEG++ A + + +KA+A+R A A
Sbjct: 150 DRQAFSASVRDHVFDDLASMGFKLVSYTVNDISDNSDYMLSLGITQTAIVKREAAEGKARNESEAKKKVAEYTAQARIAEAHALREAHVVVAQQXXXXXXXXXXXXXKKASFEREVNQARAEAEAAGPIESARQGQAVIREKTRQIEAEEKIKLDIADQTIAREKKEKEGMAFADKLAQTHKADAVRILAQA 341
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: A0A7S3LRV4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRV4_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.170e-31 Identity = 78/145 (53.79%), Postives = 100/145 (68.97%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQ 438
DR AFS VR+H+ +DL +MGF LVSYTVN + D++ YM +LG TQTA+VKREAAEG+++N SEAKK+VAE + A +AEA EAHV VA + KKA+++ EVN A A A A IE ARQGQ V+RE+T+Q
Sbjct: 150 DRQAFSASVRDHVFDDLASMGFKLVSYTVNDISDNSDYMLSLGITQTAIVKREAAEGKARNESEAKKKVAEYTAQARIAEAHALREAHVVVAQQXXXXXXXXXXXXXKKASFEREVNQARAEAEAAGPIESARQGQAVIREKTRQ 294
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Match: C1FEY3_MICCC (Flotillin-like n=2 Tax=Micromonas TaxID=38832 RepID=C1FEY3_MICCC) HSP 1 Score: 123 bits (308), Expect = 1.800e-29 Identity = 92/201 (45.77%), Postives = 120/201 (59.70%), Query Frame = 1
Query: 4 DRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALVKREAAEGESKNVSEAKKRVAENESSANMAEATYRAEAHVGVAMEDEKRAAADRDLAIKKAAYKAEVNHAEATAAVAFDIEKARQGQTVVREQTKQRAEEALVMLDVQGTEALTMQKQKEGVSKAMLIEEKNKAEAIRAKADAKAHEINQVG 606
DRA+FS+RV+E + DL MGFALVSYTV +V D GY+ ALGATQTA VKREA EG++KN S+A+ + + V A + RDL +K+ ++ EVN A A A A IE A Q Q VV++QT Q+ EEA VML V E + + EG S A LIE+KN AE+ R A+A+A+E Q+G
Sbjct: 128 DRASFSERVKELVDPDLLGMGFALVSYTVTEVDDREGYITALGATQTASVKREAEEGKAKNESQARIXXXXXXXXXXXXXXXXKRTSTVRANEFAASEAESMRDLQMKQQGFQKEVNEATARAEAAIRIETAIQNQKVVKQQTLQKVEEAEVMLQVTEREMERAKAEAEGASGAKLIEQKNNAESRRVAAEAEAYEKQQLG 328 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15228.3938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15228.3938.1 >prot_Ecto-sp13_S_contig15228.3938.1 ID=prot_Ecto-sp13_S_contig15228.3938.1|Name=mRNA_Ecto-sp13_S_contig15228.3938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=214bp QDRAAFSQRVREHIKEDLNNMGFALVSYTVNQVLDSTGYMEALGATQTALback to top mRNA from alignment at Ecto-sp13_S_contig15228:194..4221+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15228.3938.1 ID=mRNA_Ecto-sp13_S_contig15228.3938.1|Name=mRNA_Ecto-sp13_S_contig15228.3938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4028bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15228:194..4221+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15228:194..4221+ >mRNA_Ecto-sp13_S_contig15228.3938.1 ID=mRNA_Ecto-sp13_S_contig15228.3938.1|Name=mRNA_Ecto-sp13_S_contig15228.3938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=642bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15228:194..4221+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |