prot_Ecto-sp13_S_contig1522.3933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1522.3933.1
Unique Nameprot_Ecto-sp13_S_contig1522.3933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1346
Homology
BLAST of mRNA_Ecto-sp13_S_contig1522.3933.1 vs. uniprot
Match: A0A6H5JG49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG49_9PHAE)

HSP 1 Score: 1808 bits (4684), Expect = 0.000e+0
Identity = 1130/1359 (83.15%), Postives = 1164/1359 (85.65%), Query Frame = 0
Query:    1 MQPHERAEAFEGREMFAEALKWHRQDLEAARACVVSGYEEEERESVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGPYPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDLVADSVDVGFAKSSNGGVSESXXXXXXXXXXXXXSGCLLRAEYNVGMSLFEQEKRGDAEGHLSAAVKIFQRLFAAGRRAQARTTLQPAGXXXXXXXXXXXXXXXXXXXX--STLDTWKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSALD-DSRQGWRKNAAKTLRASAEAFLYIGDHSRALPPLLRLVEVLRRRLAGGAGRHHGEEDEVHRRSLILGVEELWDRASSGLRLPTEVDADGDDPDEDRLQLDQIREGVADLLRAVRGGVSGEEEAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPPPFRRVGPMPTSAFAQRXXXXXXXXXXXXXXXRNVLGNLSRDSSAS---------SRQQQTSGAAEGPTGAQTPRGVGEGVIAAGVGGFGGSAGGERWAAGDGGGSFAGLRAAVAAQDGTGAASAAAEGRARGDEVGGRDTALSKYLEKCHHLQEKPNPLACTRLAQADHRGLDTAPAAXXXXXXXXXXXXXXXXXXXRC--PPAPHQTLDLGACRLTDRELRVLLHVLSRRRGGVRPDAAXXXXXXXXXXDAPTPSPRLGALVLNENPGIGAGALRELCGGXXXXXXXXMNTSRNGSGGSLLSSLLRLELSACRLTAADLEGFSSNGAGPPSSHQTAAANVCLRALVLRDNPLTRLRERGLVDGGNEDEDAWIEPARKGTAALQHLIARAPSLDVLDVSGCSQIPDGPARRLYSPRVSDLLASALSAGLEARVVAGKLAASHGAGRVADGSGGXGGNDERSESDGRGQVSTLRMGNNRFSRESWGDVLEVLSSNPPKELDLSFASALPGRSAATGDGDVTAATAAAVALTPVGGGNDGSPGAFTRPPRPAPPAQTLGELLVATVLPADAPGVETLNLTGSTGLLLLNDRWRQQRRGVDEGGDIEDPSEPLACPSSSGMEAFLLLLRDALMSPLCETTHLLLSGVRGTPXXXXXXXXXXXXXXXXXXXXXXPPLAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAXXXXXVSCLISNDDQDEVGLGMAGGGLRRLSLRACGLGAAGLAAVVRALVAVPGDGLGPGTRRKGRPLPKLLDLSDNRPLVGAAVGTARREQDRGLGGADLKELAGLVRVLQRKFMVSVAVTGDQRRAFGRPRISSGHEPAALVDLSGNGLDLLPERHP 1345
            MQPHERAEAFEGREMFAEALKWHRQDLEAARACVVSG EEEERESVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGG YPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDLVADSV+ G+AKSSNGGV ES   XXXXXXXX  SGCLLRAEYNVGMSLFEQEKRGDAE HLSAAVKIF+ LFA G  AQA +T QPAG      X               STLD WKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSAL+ DSRQG R+NAA+TL+ASAEAFLYIGDHS ALPPLLRLVEVLRRRLAGGAGRHHGEEDEVH RSLILGVEEL DRASSGLRLPTEVDA+GDDPDEDRLQLDQIREGVA L+RA RGGVSGE  A  XXXXXXXXXXXXXXXXXXXXXXXXX                                  PSSP PFRRVGP+PTSAFAQRXXXXXXXXXXXXXX RNVLGN SRDSS           SRQ+Q  GAA G T AQ PRGVGEGVIA GVGGFGGSAGGE WAAGDGGGSFAGLRAAVAA+DGT A SAAAE  ARGDEVGGRDTALSKYL+KC HLQEKPNPLACTRLA+ DHRGLDTA AAXXXXXXXXXXXXXXXXXXX    PPAPHQTLDLGACRLTDRELRVLLHVLS  RGGV PDAA           APTP PRLGALVLN NPGIGAGALRELCGG        +N SR+G+GGSL SSLLRLELSAC LTAADLEGFSS+GA PP S QTAAA VCL ALVLRDNPLTRLRERG VDG N+D+DAWIEPARKGTAALQ LIARAPSLDVLDVSGCSQIPDGPA RLYSP+VSDLLASAL AGLEARVVAGKLAA++GAGRVADGS G GGNDERSESDGR QVSTLRMGNNRFS ESW DVLEVLSS PP+ELDLSFASALPGRSAATGDG V  ATAAAVALTPVGGGN+ SPGA T P RPAPPAQTLGELL ATVLPADAPGVETLNLTGSTGLLLL+DR RQQRRGV+ G  IEDPSEPLAC SS GMEAF+LLLRDALMSPLCETTHLLLSGVRG  XXXXXXXXXXXXXXXXXXXXXX   AAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAA     VSCLISNDD+DEVGLGMAGG LRRLSLRACGL AAGLAAVVRALVA P  GL PGTRRKGR LPKLLDLSDNRPLVGAAVGTAR EQDRGL  ADL ELAGL+RVL+R+FMVSVAVTGDQRRAFGRPR+SSG EPAALVDLSGNGLDLLPERHP
Sbjct:  340 MQPHERAEAFEGREMFAEALKWHRQDLEAARACVVSGDEEEERESVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGLYPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDLVADSVE-GYAKSSNGGVFESATAXXXXXXXX--SGCLLRAEYNVGMSLFEQEKRGDAEAHLSAAVKIFRGLFAFGGGAQAGSTFQPAGGGGEGEXAAASVGAAAGTPAAASTLDAWKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSALESDSRQGRRRNAAETLQASAEAFLYIGDHSGALPPLLRLVEVLRRRLAGGAGRHHGEEDEVHCRSLILGVEELCDRASSGLRLPTEVDANGDDPDEDRLQLDQIREGVAGLVRAARGGVSGE--AXXXXXXXXXXXXXXXXXXXXXXXXXXXEPDGRGRAHASEGQTNSLQQQQQGHAAGEGADAPPSSPAPFRRVGPVPTSAFAQRXXXXXXXXXXXXXX-RNVLGNFSRDSSXXXXXXXXXXXSRQKQKFGAAVGATCAQAPRGVGEGVIATGVGGFGGSAGGEGWAAGDGGGSFAGLRAAVAARDGTAAVSAAAEATARGDEVGGRDTALSKYLDKCDHLQEKPNPLACTRLAKVDHRGLDTALAAXXXXXXXXXXXXXXXXXXXXXXXPPAPHQTLDLGACRLTDRELRVLLHVLSGGRGGVGPDAAVAAATSGGGQGAPTPPPRLGALVLNGNPGIGAGALRELCGGRG------VNASRDGNGGSLFSSLLRLELSACHLTAADLEGFSSSGARPPPSEQTAAATVCLEALVLRDNPLTRLRERGPVDGVNDDDDAWIEPARKGTAALQDLIARAPSLDVLDVSGCSQIPDGPAGRLYSPQVSDLLASALRAGLEARVVAGKLAAANGAGRVADGSSGDGGNDERSESDGRAQVSTLRMGNNRFSWESWVDVLEVLSSAPPRELDLSFASALPGRSAATGDG-VGTATAAAVALTPVGGGNNDSPGAVTPPLRPAPPAQTLGELLAATVLPADAPGVETLNLTGSTGLLLLDDRRRQQRRGVEGGVGIEDPSEPLACLSSLGMEAFVLLLRDALMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAA-VSCLISNDDEDEVGLGMAGGVLRRLSLRACGLEAAGLAAVVRALVAEPEGGLEPGTRRKGRVLPKLLDLSDNRPLVGAAVGTARWEQDRGLREADLTELAGLLRVLEREFMVSVAVTGDQRRAFGRPRVSSGREPAALVDLSGNGLDLLPERHP 1684          
BLAST of mRNA_Ecto-sp13_S_contig1522.3933.1 vs. uniprot
Match: D8LDQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDQ0_ECTSI)

HSP 1 Score: 1597 bits (4136), Expect = 0.000e+0
Identity = 1028/1328 (77.41%), Postives = 1051/1328 (79.14%), Query Frame = 0
Query:    1 MQPHERAEAFEGREMFAEALKWHRQDLEAARACVVSGYEEEERESVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGPYPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDLVADSVDVGFAKSSNGGVSESXXXXXXXXXXXXXSGCLLRAEYNVGMSLFEQEKRGDAEGHLSAAVKIFQRLFAAGRRAQARTTLQPA-GXXXXXXXXXXXXXXXXXXXXSTLDTWKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSAL-DDSRQGWRKNAAKTLRASAEAFLYIGDHSRALPPLLRLVEVLRRRLAGGAGRHHGEEDEVHRRSLILGVEELWDRASSGLRLPTEVDADGDDPDEDRLQLDQIREGVADLLRAVRGGVSGEEEAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSPPPFRRVGPMPTSAFAQRXXXXXXXXXXXXXXXRNVLGNLSRDSSASSR-------QQQTSGAAEGPTGAQTPRGVGEGVIAAGVGGFGGSAGGERWAAGDGGGSFAGLRAAVAAQDGTGAASAAAEGRARGDEVGGRDTALSKYLEKCHHLQEKPNPLACTRLAQADHRGLDTAPAAXXXXXXXXXXXXXXXXXXXR--CPPAPHQTLDLGACRLTDRELRVLLHVLSRRRGGVRPDAAXXXXXXXXXXDAPTPSPRLGALVLNENPGIGAGALRELCGGXXXXXXXXMNTSRNGSGGSLLSSLLRLELSACRLTAADLEGFSSNGAGPPSSHQTAAANVCLRALVLRDNPLTRLRERGLVDGGNEDEDAWIEPARKGTAALQHLIARAPSLDVLDVSGCSQIPDGPARRLYSPRVSDLLASALSAGLEARVVAGKLAASHGAGRVADGSGGXGGNDERSESDGRGQVSTLRMGNNRFSRESWGDVLEVLSSNPPKELDLSFASALPGRSAATGDGDVTAATAAAVALTPVGGGNDGSPGAFTRPPRPAPPAQTLGELLVATVLPADAPGVETLNLTGSTGLLLLNDRWRQQRRGVDEGGDIEDPSEPLACPSSSGMEAFLLLLRDALMSPLCETTHLLLSGVRGTPXXXXXXXXXXXXXXXXXXXXXXPPLAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAXXXXXVSCLISNDDQDEVGLGMAGGGLRRLSLRACGLGAAGLAAVVRALVAVPGDGLGPGTRRKGRPLPKLLDLSDNRPLVGAAVGTARREQDRGLGGADLKELAGLVRVLQRKFMVSVAVTGDQRRAFGR 1317
            MQPHERAEAFEGREMFAEAL+WHRQDLEAARACVVSG EEEER SVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGPYPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVD+VADSVD GFAK+SNGGVSES XXXXXXXXXX  SGCLLRAEYNVGMSLFEQEKR DAEGHLSAAVKIF+RLFAAG  AQA +T  PA G XXXXXXXXXXXXXXXXXXXSTLD WKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSAL DDSRQG  K AA+TLRASAEAFLY GDHSRALPPLL LVEVLRRRLAGGAGRHHGEEDE                     R   E D  G      R    + R       +  +G  +GE   A                                                            PSSP PFRRVGP+PTSAFAQR XXXXXXXXXXXXX R VLG    D SA+S         +QTSG A G  GAQ PRGVGEGV+A G GGFGGSAG   W      GSFAGLRAA AAQD + A SAAAEGRARGDEVGGRDTALSKYLEKCHHLQEKPNPLAC RLAQA+HRGLDTAPAAXXXXXXXX           R   PPAPHQ LDLGACRLTDRELRVLLHVLSR RGGV PDAA XXXXXXXXX  P PSPRLGALVLN NPGIGAGALRELCGGXXXXXXXXMN SRNGSGGSL SSLLRLELSACRLTAADLEGFSSNGAGPPS  QTAAA VCLRALVLRDNPLTRLRERG VDGGNEDEDAWIEPARKGT ALQHLIARAPSL+VLDVSGCSQIPDGP RRLYSP+VSDLLASALSAGLEARVVAGKLAA+ GAGRVADGSGG GGNDERSESDGR QVSTLRMGNNRFSRESWGDVLEVLSSNPP+ELDLSFAS LPGRSAAT DG VT AT                 GA T PPRPAPPAQTLGELL ATVLPADAPGVETLNLTGSTGLLL                       PLACPSSSGMEAFLLLLRD LMSPLCETTHLLLSGVRG  XXXXXXXXXXXXXXXXXXXXXX   AAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAA     VSCLISN D+DEVGLGMAGG LRRLSLRAC LGAAGLA VVRALVA PG G GPGTRRKGR LPKLLDLSDNRPL GAAVGTAR EQD GLG ADL ELAGLVRVL+R+FMVSVAVT DQRRAFGR
Sbjct:  358 MQPHERAEAFEGREMFAEALRWHRQDLEAARACVVSGDEEEERGSVLDLARALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGPYPSPPEEQDLVLELGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDVVADSVDAGFAKTSNGGVSESAXXXXXXXXXXTASGCLLRAEYNVGMSLFEQEKRRDAEGHLSAAVKIFRRLFAAGGGAQAGSTFHPAAGGXXXXXXXXXXXXXXXXXXXSTLDAWKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSALEDDSRQGREKIAAETLRASAEAFLYTGDHSRALPPLLMLVEVLRRRLAGGAGRHHGEEDE---------------------RKGGEPDGRG------RAHAPEGRTNSPQQQQ--QGHAAGEVAGAS-----------------------------------------------------------PSSPAPFRRVGPVPTSAFAQRRXXXXXXXXXXXXX-RKVLGKFPGDRSATSSAVTTVSSSRQTSGTAVGAAGAQAPRGVGEGVVATGGGGFGGSAGXXGWVXXXXXGSFAGLRAAAAAQDESTAVSAAAEGRARGDEVGGRDTALSKYLEKCHHLQEKPNPLACARLAQAEHRGLDTAPAAXXXXXXXXVDPACDGDNTHRHRSPPAPHQALDLGACRLTDRELRVLLHVLSRGRGGVGPDAAVXXXXXXXXXXXPMPSPRLGALVLNGNPGIGAGALRELCGGXXXXXXXXMNASRNGSGGSLFSSLLRLELSACRLTAADLEGFSSNGAGPPSFDQTAAATVCLRALVLRDNPLTRLRERGPVDGGNEDEDAWIEPARKGTVALQHLIARAPSLEVLDVSGCSQIPDGPVRRLYSPQVSDLLASALSAGLEARVVAGKLAAATGAGRVADGSGGDGGNDERSESDGRAQVSTLRMGNNRFSRESWGDVLEVLSSNPPRELDLSFASVLPGRSAATADGVVTTATXXXXXXXXXXXXXXXXXGAVTPPPRPAPPAQTLGELLAATVLPADAPGVETLNLTGSTGLLLXXXXXXXXXXXXXXXXXXXXXXAPLACPSSSGMEAFLLLLRDTLMSPLCETTHLLLSGVRGPXXXXXXXXXXXXXXXXXXXXXXXXXXAAVFGPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAA-VSCLISNHDEDEVGLGMAGGRLRRLSLRACALGAAGLAVVVRALVAEPGGGSGPGTRRKGRSLPKLLDLSDNRPLAGAAVGTARPEQDGGLGEADLTELAGLVRVLEREFMVSVAVTRDQRRAFGR 1595          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1522.3933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG49_9PHAE0.000e+083.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDQ0_ECTSI0.000e+077.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 772..1235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1522contigEcto-sp13_S_contig1522:5624..12490 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1522.3933.1mRNA_Ecto-sp13_S_contig1522.3933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1522 5572..12575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1522.3933.1 ID=prot_Ecto-sp13_S_contig1522.3933.1|Name=mRNA_Ecto-sp13_S_contig1522.3933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1346bp
MQPHERAEAFEGREMFAEALKWHRQDLEAARACVVSGYEEEERESVLDLA
RALRNTGRCLGKLGNSGYAESKKCLTEARELVGHGGPYPSPPEEQDLVLE
LGNLMYSRYVLCDEQGVRFLADEALEAALEYYRESRELCVDLVADSVDVG
FAKSSNGGVSESAAAAAAAAAAAAASGCLLRAEYNVGMSLFEQEKRGDAE
GHLSAAVKIFQRLFAAGRRAQARTTLQPAGGGSDEEERAAASAEAAAAAA
STLDTWKAAARKQEGLSGLGGVYASSLYLLGECLASSCVPSSALDDSRQG
WRKNAAKTLRASAEAFLYIGDHSRALPPLLRLVEVLRRRLAGGAGRHHGE
EDEVHRRSLILGVEELWDRASSGLRLPTEVDADGDDPDEDRLQLDQIREG
VADLLRAVRGGVSGEEEAAGAGAGAAAAGAAAGAEGTEREQREGREPDGR
GRAHASEGRTNSPQQQQQGHAAGEGAGASPSSPPPFRRVGPMPTSAFAQR
RRRARAARGGGGGGGRNVLGNLSRDSSASSRQQQTSGAAEGPTGAQTPRG
VGEGVIAAGVGGFGGSAGGERWAAGDGGGSFAGLRAAVAAQDGTGAASAA
AEGRARGDEVGGRDTALSKYLEKCHHLQEKPNPLACTRLAQADHRGLDTA
PAAAAAAAAFDSASDGDNNHRRRCPPAPHQTLDLGACRLTDRELRVLLHV
LSRRRGGVRPDAAAAAASSGGGGDAPTPSPRLGALVLNENPGIGAGALRE
LCGGGGGGSGRGMNTSRNGSGGSLLSSLLRLELSACRLTAADLEGFSSNG
AGPPSSHQTAAANVCLRALVLRDNPLTRLRERGLVDGGNEDEDAWIEPAR
KGTAALQHLIARAPSLDVLDVSGCSQIPDGPARRLYSPRVSDLLASALSA
GLEARVVAGKLAASHGAGRVADGSGGGGGNDERSESDGRGQVSTLRMGNN
RFSRESWGDVLEVLSSNPPKELDLSFASALPGRSAATGDGDVTAATAAAV
ALTPVGGGNDGSPGAFTRPPRPAPPAQTLGELLVATVLPADAPGVETLNL
TGSTGLLLLNDRWRQQRRGVDEGGDIEDPSEPLACPSSSGMEAFLLLLRD
ALMSPLCETTHLLLSGVRGTPPPPPARNNTDCNSAAPGGAPPSPPLAAVF
GPRDAKSLCEAASACASLRCLDLAGCDLSGPVGAAAAAAAAVSCLISNDD
QDEVGLGMAGGGLRRLSLRACGLGAAGLAAVVRALVAVPGDGLGPGTRRK
GRPLPKLLDLSDNRPLVGAAVGTARREQDRGLGGADLKELAGLVRVLQRK
FMVSVAVTGDQRRAFGRPRISSGHEPAALVDLSGNGLDLLPERHP*
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