prot_Ecto-sp13_S_contig15218.3932.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15218.3932.1
Unique Nameprot_Ecto-sp13_S_contig15218.3932.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length170
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15218.3932.1 vs. uniprot
Match: A0A6H5K5Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y6_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 2.900e-102
Identity = 156/169 (92.31%), Postives = 161/169 (95.27%), Query Frame = 0 
Query:    1 MTMMTSVPPPGKGKFVKMGGTEDAQSFGPRCILASGLSLEERGAIRSILDDEDQDREDKTPLVAHNFEIAEKRVGDVLTDAPMIGLLQEKQEEARDASPEPSSPVILISGFTNPELKDFVTRFRSETGVRAAFAKAVPNAMTKSVARLCGEIAQDHADAIAGKLSGAKE 169
            +TMM S PPPG+GKFVKMGGTEDAQSFGPRCILASGLSLEERGAIRSILDDEDQDRED+TP VAH  EIAEKRVGDVLTDAPMIGLLQEKQE ARDASPEPSSPVILISGFTNPEL+DFVTRFRSETGVRAAFAKAVPNAMTKSVARLCGEIAQDHADA+AGKLS  KE
Sbjct:   76 ITMMMSGPPPGRGKFVKMGGTEDAQSFGPRCILASGLSLEERGAIRSILDDEDQDREDRTPFVAHTLEIAEKRVGDVLTDAPMIGLLQEKQE-ARDASPEPSSPVILISGFTNPELRDFVTRFRSETGVRAAFAKAVPNAMTKSVARLCGEIAQDHADALAGKLSSGKE 243
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BLAST of mRNA_Ecto-sp13_S_contig15218.3932.1 vs. uniprot
Match: D8LIT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIT4_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 4.150e-93
Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 0 
Query:   18 MGGTEDAQSFGPRCILASGLSLEERGAIRSILDDEDQDREDKTPLVAHNFEIAEKRVGDVLTDAPMIGLLQEKQEEARDASPEPSSPVILISGFTNPELKDFVTRFRSETGVRAAFAKAVPNAMTKSVARLCGEIAQDHADAIAGKLSGAKE 169
            MGGTEDAQSFGPRCILASGLSLEER AIRSILDD+DQDRED+TPLVAHN EIAEKRVGDVLTDAPMIGLLQEKQEEARDASPEPSSPVILISGFTNPEL+DFVTRFRSETGV AAFAKAVPNAMTKSVARLC EIAQDHADA+AGKLS  KE
Sbjct:    1 MGGTEDAQSFGPRCILASGLSLEERRAIRSILDDKDQDREDRTPLVAHNLEIAEKRVGDVLTDAPMIGLLQEKQEEARDASPEPSSPVILISGFTNPELRDFVTRFRSETGVGAAFAKAVPNAMTKSVARLCEEIAQDHADALAGKLSDGKE 152
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15218.3932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5Y6_9PHAE2.900e-10292.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIT4_ECTSI4.150e-9393.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016621Uncharacterised conserved protein UCP014543PFAMPF12646DUF3783coord: 104..157
e-value: 3.0E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15218contigEcto-sp13_S_contig15218:146..2246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15218.3932.1mRNA_Ecto-sp13_S_contig15218.3932.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15218 56..2413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15218.3932.1 ID=prot_Ecto-sp13_S_contig15218.3932.1|Name=mRNA_Ecto-sp13_S_contig15218.3932.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=170bp
MTMMTSVPPPGKGKFVKMGGTEDAQSFGPRCILASGLSLEERGAIRSILD
DEDQDREDKTPLVAHNFEIAEKRVGDVLTDAPMIGLLQEKQEEARDASPE
PSSPVILISGFTNPELKDFVTRFRSETGVRAAFAKAVPNAMTKSVARLCG
EIAQDHADAIAGKLSGAKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016621UCP014543