prot_Ecto-sp13_S_contig15214.3931.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15214.3931.1
Unique Nameprot_Ecto-sp13_S_contig15214.3931.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: D8LE80_ECTSI (60S ribosomal protein L41 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE80_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 4.400e-50
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLP ALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPAALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A836CFJ6_9STRA (60S ribosomal protein L41 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ6_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.750e-24
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGC-LADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVKTL   SL L+V+P +++  V A VE +EFLP AL RL+ G+ QL+S   L  AGIEEADTLTLLL V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKTLARDSLVLDVAPTSTVGDVMAMVEDREFLPAALQRLSCGSTQLASTTTLEAAGIEEADTLTLLLSVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 101          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S2HF29_9STRA (60S ribosomal protein L41 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF29_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.850e-18
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIF+    G S    V    S+ +VKA +E +EF+P+ L+RL +G   L  G L   G++E DT+T+LL+V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFIAGAQGPSTAYTVDSDASVESVKAMIENREFVPSELIRLVNGATALEGGSLLGNGVQEDDTITMLLEVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 100          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S4DB66_HETAK (60S ribosomal protein L41 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB66_HETAK)

HSP 1 Score: 80.5 bits (197), Expect = 1.150e-17
Identity = 60/100 (60.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVK   G S    VS   S+    A VE Q FLP  L+R    + QL++G LAD G+EE  T+++LL V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKDPSGRSTAYTVSKDASVEGFNAQVENQTFLPADLVRFVCESKQLTTGSLADFGVEEGVTISMLLHVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 100          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A6A4FFT9_9STRA (60S ribosomal protein L41 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FFT9_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 2.040e-17
Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQ+FV+TL G+ L L V+   S+ +VK AVE  E++P    RL     QL+SG LAD  + E DTL +LLDV GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:  831 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPN--FRLVCAGKQLTSGSLADYAVGECDTLKMLLDVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 928          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S4T8Y9_9STRA (60S ribosomal protein L41 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8Y9_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.470e-17
Identity = 58/100 (58.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIF+    G S    V    SI +VKA +E +EF+P  L+RL +G + L  G L   G++E DT+T+LL+V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:   89 MQIFIAGAQGPSTAYTVDSDASIESVKAMIENKEFVPADLIRLVNGASVLEGGSLLGNGVQEDDTITMLLEVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 188          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S4T995_9STRA (60S ribosomal protein L41 n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S4T995_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.530e-17
Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQI V +  G S    V   T++T +K+ +E QEF+P  L++L  G+A+L  G LA  G+EE + L L L++ GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:   17 MQIIVNSPAGTSTAYAVEATTTVTDLKSMIENQEFIPGHLIKLVSGDAELLEGTLAGNGVEEDEELDLCLEIAGGMRAKWRKKRXXXXXXXXXXXRQRAR 116          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A6G0NVC9_9STRA (60S ribosomal protein L41 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NVC9_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.150e-17
Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQ+FV+TL G+ L L V+   S+ +VK AVE  E++P    RL     QL+SG LAD  + E DTL +LLDV GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:  710 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPN--FRLVCAGKQLTSGSLADYVVGECDTLKMLLDVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 807          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S0KA44_9STRA (60S ribosomal protein L41 n=2 Tax=Leptocylindrus TaxID=163515 RepID=A0A7S0KA44_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 6.770e-17
Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQ-LSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFV    G++   EV   TS+ ++K  VE Q F+P+ L RL   N+  L+ G LA  GIEE DT+TL+LDV GGMR KWRKK XXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVSYPQGSTRAYEVDSDTSVESLKLMVENQTFIPSGLCRLVDANSTTLTGGSLAAMGIEEDDTVTLMLDVEGGMRRKWRKKXXXXXXXXXXXXRQRAR 101          
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Match: A0A7S1DCU7_CYCTE (60S ribosomal protein L41 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCU7_CYCTE)

HSP 1 Score: 77.8 bits (190), Expect = 1.320e-16
Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFV    G+S    V    S+  +K  +E +EF+P+ L++L +G   L  G LA  GIE  DTLT+LLDV GGMR KWRKK XXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVACADGSSTAYTVESDASVETLKLMIENKEFVPSDLIKLVNGADSLEGGSLAANGIEAEDTLTMLLDVNGGMRRKWRKKXXXXXXXXXXXXRQRAR 100          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15214.3931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE80_ECTSI4.400e-5099.0060S ribosomal protein L41 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CFJ6_9STRA1.750e-2470.3060S ribosomal protein L41 n=1 Tax=Tribonema minus ... [more]
A0A7S2HF29_9STRA2.850e-1857.0060S ribosomal protein L41 n=1 Tax=Helicotheca tame... [more]
A0A7S4DB66_HETAK1.150e-1760.0060S ribosomal protein L41 n=1 Tax=Heterosigma akas... [more]
A0A6A4FFT9_9STRA2.040e-1762.0060S ribosomal protein L41 n=9 Tax=Phytophthora Tax... [more]
A0A7S4T8Y9_9STRA3.470e-1758.0060S ribosomal protein L41 n=3 Tax=Ditylum brightwe... [more]
A0A7S4T995_9STRA3.530e-1756.0060S ribosomal protein L41 n=2 Tax=Ochrophyta TaxID... [more]
A0A6G0NVC9_9STRA5.150e-1762.0060S ribosomal protein L41 n=1 Tax=Phytophthora fra... [more]
A0A7S0KA44_9STRA6.770e-1759.4160S ribosomal protein L41 n=2 Tax=Leptocylindrus T... [more]
A0A7S1DCU7_CYCTE1.320e-1657.0060S ribosomal protein L41 n=1 Tax=Cyclophora tenui... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 85..100
NoneNo IPR availableGENE3D3.10.20.90coord: 1..99
e-value: 7.4E-17
score: 62.9
NoneNo IPR availablePANTHERPTHR10666:SF328RIBOSOMAL PROTEIN S27Acoord: 1..96
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..96
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 1..71
e-value: 9.7E-8
score: 41.7
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 3..72
e-value: 1.2E-8
score: 34.6
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..75
score: 14.643
IPR007836Ribosomal protein L41PFAMPF05162Ribosomal_L41coord: 76..98
e-value: 7.3E-8
score: 32.3
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15214contigEcto-sp13_S_contig15214:2010..2312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15214.3931.1mRNA_Ecto-sp13_S_contig15214.3931.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15214 2010..2312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15214.3931.1 ID=prot_Ecto-sp13_S_contig15214.3931.1|Name=mRNA_Ecto-sp13_S_contig15214.3931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPTALMRLNHGNAQL
SSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRMRRLRRKRRKMRQRAR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR007836Ribosomal_L41
IPR029071Ubiquitin-like_domsf