prot_Ecto-sp13_S_contig1521.3928.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1521.3928.1
Unique Nameprot_Ecto-sp13_S_contig1521.3928.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
BLAST of mRNA_Ecto-sp13_S_contig1521.3928.1 vs. uniprot
Match: D7FMI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI5_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 6.450e-95
Identity = 148/155 (95.48%), Postives = 149/155 (96.13%), Query Frame = 0
Query:    1 MASGPSWMQRDQ--GEGLTAADGGISADGTNEPNARYGAIKAEMTDTNAMRFGFRVASLALGLMMIIAAFTELLNLSSFTTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLL 153
            MASGPSWMQRDQ  GEGLTA DGGI ADGTNEPNA YGAIKAEMTDTNA+RFGFRVASLALGLMMIIAAFTEL NLSSFTTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLL
Sbjct:    1 MASGPSWMQRDQLQGEGLTATDGGIGADGTNEPNASYGAIKAEMTDTNAVRFGFRVASLALGLMMIIAAFTELWNLSSFTTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLL 155          
BLAST of mRNA_Ecto-sp13_S_contig1521.3928.1 vs. uniprot
Match: A0A7S2SJU5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJU5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.110e-10
Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   31 PNARYGAIKAEMTDTNAMRFGFRVASLALGLMMIIAAFTELLNL----SSFTTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLL 152
            P + YG++++       +R   R+  + + +MM  A    L NL    S  T   ++ Y +LFA VL LHE   +   + V+  +R+ FG ++  +G+  F++FIAFLNF LTD+G     TG+ L
Sbjct:   28 PPSNYGSMESSSNARLYVRAAIRLVVVGMCVMMSAAGALSLANLDNSNSVVTDVIVSCYVMLFASVLFLHEVNEMRRIELVESILRKNFGFLFKPLGKGCFMVFIAFLNFGLTDSGELGLATGICL 153          
BLAST of mRNA_Ecto-sp13_S_contig1521.3928.1 vs. uniprot
Match: A0A4D9DAG1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAG1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.890e-8
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0
Query:   53 RVASLALGLMMIIAAFTELLNLSSFT--TFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLL 152
            R  ++ L  +M  +A   +L ++     TFF+ALY  + A +L   E         +D   RR FG +YG  G+AL+IIFIAFLNF L   G     TG++L
Sbjct:   56 RFVNMGLACLMAFSAVNGILKIAQLQLDTFFVALYMFISAAILFFFELCQFKYVAFIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGILQFATGIVL 157          
BLAST of mRNA_Ecto-sp13_S_contig1521.3928.1 vs. uniprot
Match: A0A7S3NGQ3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGQ3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.410e-6
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    7 WMQRD-QGEGLTAADGGISAD-GTNEPNARYGAIKAEMTDTNAMRFGFRVASLALGLMMIIAAFTELLNLSSF--------TTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTD 140
            W+  D +G+G   A   ++ D G  +P         E      + +GFR+    L  MM   A T +L+L+ F        + F I+ Y +LFA V    E+  ++  D   + ++R FG ++  +G+A+FIIF+AFLNF + +
Sbjct:   10 WLHDDYRGDGTQEAVSPMTGDTGLRQPQTN------EFGSKPMVIWGFRIVHFGLATMM---AATGILSLTEFGRVNRNQLSAFVISFYLILFAVVWFAFETMFIMPIDYFIFHLKRNFGFLFHPLGKAIFIIFVAFLNFGVQE 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1521.3928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FMI5_ECTSI6.450e-9595.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SJU5_9STRA1.110e-1033.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9DAG1_9STRA1.890e-837.25Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3NGQ3_9STRA7.410e-629.86Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 52..152
e-value: 8.9E-8
score: 32.3
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 38..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..73
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1521contigEcto-sp13_S_contig1521:12320..16804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1521.3928.1mRNA_Ecto-sp13_S_contig1521.3928.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1521 12320..16804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1521.3928.1 ID=prot_Ecto-sp13_S_contig1521.3928.1|Name=mRNA_Ecto-sp13_S_contig1521.3928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
MASGPSWMQRDQGEGLTAADGGISADGTNEPNARYGAIKAEMTDTNAMRF
GFRVASLALGLMMIIAAFTELLNLSSFTTFFIALYNLLFAGVLILHESQG
LIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGL
LLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15