prot_Ecto-sp13_S_contig15204.3921.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15204.3921.1
Unique Nameprot_Ecto-sp13_S_contig15204.3921.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length708
Homology
BLAST of mRNA_Ecto-sp13_S_contig15204.3921.1 vs. uniprot
Match: A0A6H5JIT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIT4_9PHAE)

HSP 1 Score: 809 bits (2089), Expect = 9.540e-281
Identity = 569/778 (73.14%), Postives = 584/778 (75.06%), Query Frame = 0
Query:    4 RARLVDGLLCSALSTELFLSGLDGSRVCADRERFAEEVGGPYARDDDFVSSSGFVNSFGALDSSS----EDXXXXXXKDEGREDVGGRLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIADSTVPEGTSTEERTIAGRQGVLRLYGAALIKLRVSVFLFCSASTAAAGPTGEVDGDVEKSRNGNDKQGPSELTLRRQGVMSRENLDAVAAHLLSLRTETGGEDGDGQREVDSPAXXXXXXXXXXXXXXXPTVGGGEGVDSGRRARDWMRIEVGRAALCAGGSNAXXXXXXXXAGRNVPFSTRVAALLLSRSGERGGPLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEGPRVTRTTPSVAEIEFGRDPWPEEDLPRASEHKRK---------------------------------------------RP-------------------------GGSGSDGEPPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGCASAEAPAAAAPAAAGDHASSSAHKTKIGTTDTAGADGSETAARPEPDNAAADDESAPPNADSILTENPGSSTRGDDLHESSSPPAPPPQLPDLDPDHNPGWSDPWRALQAGAPHPCLSGLVDPPGLATAGGTQLVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKRRLPPPXXXXXXXXXXXXXXXXXXXXGRALATTEGEAGEGVASLGGIAVRHRTVEVTRGDDSGEGQAKKRPGGGRGLADVLIPVEVLLRGNASA 707
            RARLVDGLLCSALST+LFLSGLDGSRV A RERF EEV GPYARDD FVSSSGFVNSFGALDSSS    ED       DEGRED+GGRLGE           XXXXXXXXXXXX       SIADSTVPEGTSTEE T AGRQGVLRLYG+ALIKLRVSVFLFCSA               EKS +GNDKQGPSELTLRRQGVMSRENLDAVAAHLLSLRTETGG          SP XXXXXXXXXXXXXXX      E VDSGRRARDWM+IEVGRAALCAGGSNA        AGRNVPFSTRVAALLLSRSGERG     XXXXXXXXXXXXXXXXXXXXXXXXXXXX GEEGPRV RTTPSVAEIEFGRDPWPEEDLPRASE   +                                             RP                         GGSG DG+PPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNG ASAEAPA       GD ASSSA +TKIGTTDTAGA GSETAARP PDNAAA DESAPP+ADSILTE  GSS  GDDLH+SSSPP  PPQLPDLDPDH+PG SDPWRALQAGAPHPCLSGLV+PP LATA GT+LVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKR     XXXXXXXXXXXXXXXXXXXXGRALATTEGEAG+GV +LGGIAVRHRTVEVTRGDDSGEGQ KKRP   RGLAD LIPVEVLL G ASA
Sbjct:  298 RARLVDGLLCSALSTDLFLSGLDGSRVGAVRERFGEEVEGPYARDDGFVSSSGFVNSFGALDSSSGSSSEDEEETGGMDEGREDLGGRLGEEGSSLSEDLAAXXXXXXXXXXXX-------SIADSTVPEGTSTEELTAAGRQGVLRLYGSALIKLRVSVFLFCSAXXXXXXXXXXXXXXXEKSIDGNDKQGPSELTLRRQGVMSRENLDAVAAHLLSLRTETGGGXXXXXXXXXSPVXXXXXXXXXXXXXXXXXXXXXEAVDSGRRARDWMKIEVGRAALCAGGSNAAATATG--AGRNVPFSTRVAALLLSRSGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEGPRVIRTTPSVAEIEFGRDPWPEEDLPRASEQVARIFLGQGAGDRAGAASSNRGGXXXXXXXXXXXXXXGIVASGDGGTNRPXXXXXXXXXXXXXXXXXXGXXXXXXGGSGGDGQPPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGSASAEAPAXXXXXXXGDPASSSALETKIGTTDTAGAGGSETAARPAPDNAAAADESAPPDADSILTEIAGSSAPGDDLHDSSSPP--PPQLPDLDPDHDPGRSDPWRALQAGAPHPCLSGLVEPPELATAVGTRLVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKRXXXXXXXXXXXXXXXXXXXXXXXXXGRALATTEGEAGQGVGNLGGIAVRHRTVEVTRGDDSGEGQEKKRPADRRGLADALIPVEVLLGGEASA 1064          
BLAST of mRNA_Ecto-sp13_S_contig15204.3921.1 vs. uniprot
Match: D8LKV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV8_ECTSI)

HSP 1 Score: 617 bits (1590), Expect = 8.080e-209
Identity = 440/712 (61.80%), Postives = 448/712 (62.92%), Query Frame = 0
Query:    4 RARLVDGLLCSALSTELFLSGLDGSRVCADRERFAEEVGGPYARDDDFVSSSGFVNSFGALDSSS----EDXXXXXXKDEGREDVGGRLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIADSTVPEGTSTEERTIAGRQGVLRLYGAALIKLRVSVFLFCSASTAAAGPTGEVDGDVE--KSRNGNDKQGPSELTLRRQGVMSRENLDAVAAHLLSLRTETGGEDGDGQREVDSPAXXXXXXXXXXXXXXXPTVGGGEGVDSGRRARDWMRIEVGRAALCAGGSNAXXXXXXXXAGRNVPFSTRVAALLLSRSGERGGPLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEGPRVTRTTPSVAEIEFGRDPWPEEDLPRASEHKRKRPGGSGSDGEPPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGCASAEAPAAAAPAAAGDHASSSAHKTKIGTTDTAGADGSETAARPEPDNAAADDESAPPNADSILTENPGSSTRGDDLHESSSPPAPPPQLPDLDPDHNPGWSDPWRALQAGAPHPCLSGLVDPPGLATAGGTQLVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKRRLPPPXXXXXXXXXXXXXXXXXXXX--GRALATTEGEAGEGVASLGGIAVRHRTVEVTRGDDSGEGQAKKRPGGGRGLADVLIPVEVLLRGNASA 707
            RARLVDGLLCSALST+LFLSGLDGSRV AD ERF EEV GPYA DDDFVSSSGFVNSFGALDSSS    ED       DEGR DVGGRLGE          XXXXXXXXXXXXXXXXXXX  IADSTVPEGTST+ERT AGRQGVLRLYGAALIKLRVSVF                       K ++GNDK+GPSELTLRRQGVMSRENLDAVA                                                                                                                                                                               K KRPGGSGSDG PPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNG AS EAPAAAAPAAAGD ASSSA +T IGTTDTAGADG ETAARP PDNA A DESAPP+ADSILTENPGSS RGDDLHESS PP  PPQLPDL PDH PG SDPWRALQAGAPHPCLSGLVDPPGLATAGGT+LVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKR LPP XXXXXXXXXXXXXXXXXXXX  GRALATTEGEAGEGV SLGGIAVRHRTVEVTRGD       KKRPGGGRGL DVLIPVEVLL   A A
Sbjct:  291 RARLVDGLLCSALSTDLFLSGLDGSRVGADLERFGEEVEGPYAHDDDFVSSSGFVNSFGALDSSSGSSSEDEERARGMDEGRGDVGGRLGEQGSSLSEDLAXXXXXXXXXXXXXXXXXXXP-IADSTVPEGTSTDERTAAGRQGVLRLYGAALIKLRVSVFXXXXXXXXXXXXXXXXXXXXXXXKGKDGNDKEGPSELTLRRQGVMSRENLDAVA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLKRPGGSGSDGHPPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGSASLEAPAAAAPAAAGDPASSSALETNIGTTDTAGADGCETAARPAPDNATAADESAPPDADSILTENPGSSARGDDLHESSWPP--PPQLPDLVPDHGPGRSDPWRALQAGAPHPCLSGLVDPPGLATAGGTRLVLPMPNPFYRRVLHALCRVHGLRSRGGETLAAKRILPPXXXXXXXXXXXXXXXXXXXXXAAGRALATTEGEAGEGVGSLGGIAVRHRTVEVTRGDGXXXXXXKKRPGGGRGLGDVLIPVEVLLGEEACA 824          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15204.3921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JIT4_9PHAE9.540e-28173.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKV8_ECTSI8.080e-20961.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..707
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15204contigEcto-sp13_S_contig15204:1829..4147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15204.3921.1mRNA_Ecto-sp13_S_contig15204.3921.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15204 1829..4147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15204.3921.1 ID=prot_Ecto-sp13_S_contig15204.3921.1|Name=mRNA_Ecto-sp13_S_contig15204.3921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=708bp
MRFRARLVDGLLCSALSTELFLSGLDGSRVCADRERFAEEVGGPYARDDD
FVSSSGFVNSFGALDSSSEDEEETGGKDEGREDVGGRLGEESSSLSEDLA
AAKSSAAAAAAMTAAAAAAASIADSTVPEGTSTEERTIAGRQGVLRLYGA
ALIKLRVSVFLFCSASTAAAGPTGEVDGDVEKSRNGNDKQGPSELTLRRQ
GVMSRENLDAVAAHLLSLRTETGGEDGDGQREVDSPAAAAAAAAAACTAA
ATPTVGGGEGVDSGRRARDWMRIEVGRAALCAGGSNAAAAAAAAGAGRNV
PFSTRVAALLLSRSGERGGPLRAAAVAAGTPPSGEESTAQEGAGGGGRRR
SSGEEGPRVTRTTPSVAEIEFGRDPWPEEDLPRASEHKRKRPGGSGSDGE
PPPRYARLLGQLPRDSRHLLARLGHHGYVKVLEHILQGFLRSSNGCASAE
APAAAAPAAAGDHASSSAHKTKIGTTDTAGADGSETAARPEPDNAAADDE
SAPPNADSILTENPGSSTRGDDLHESSSPPAPPPQLPDLDPDHNPGWSDP
WRALQAGAPHPCLSGLVDPPGLATAGGTQLVLPMPNPFYRRVLHALCRVH
GLRSRGGETLAAKRRLPPPPPPPPGPKGEGGCGGAAAAAGRALATTEGEA
GEGVASLGGIAVRHRTVEVTRGDDSGEGQAKKRPGGGRGLADVLIPVEVL
LRGNASA*
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