prot_Ecto-sp13_S_contig1520.3917.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1520.3917.1
Unique Nameprot_Ecto-sp13_S_contig1520.3917.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length467
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1520.3917.1 vs. uniprot
Match: D8LC09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC09_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.480e-75
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0 
Query:  322 TTSDGSRGGLNFETQSPTASNDLXXXXXXXXXXXXXSTSREIATASPTSSTSRGIPIMSASPTSGVTFTECTPGDSDTCYNQLEPSMKGLLVERSRGLTCEEICLVGGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC 466
            TTSDGSRGGLNFETQSPTASND+XXXXXXXXXXXXXSTSREIATASPTSSTSRGIPIMSASP SGVTFTECTPGDSDTCY+QLEPSMKGLLVERSRGLTCEE CLVGGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC
Sbjct:  528 TTSDGSRGGLNFETQSPTASNDMXXXXXXXXXXXXXSTSREIATASPTSSTSRGIPIMSASPASGVTFTECTPGDSDTCYDQLEPSMKGLLVERSRGLTCEESCLVGGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC 672
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BLAST of mRNA_Ecto-sp13_S_contig1520.3917.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 2.510e-70
Identity = 138/145 (95.17%), Postives = 140/145 (96.55%), Query Frame = 0 
Query:  322 TTSDGSRGGLNFETQSPTASNDLXXXXXXXXXXXXXSTSREIATASPTSSTSRGIPIMSASPTSGVTFTECTPGDSDTCYNQLEPSMKGLLVERSRGLTCEEICLVGGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC 466
            TTSDGSRGGLNFETQSPTASNDLXXXXXXXXXXXXXS SREIAT SPTSST RGIPIMSASPTSGVTFTECTPGDSDTCY+QLEPSMKGLLVERSRGLTCEE CL+ GGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC
Sbjct: 1205 TTSDGSRGGLNFETQSPTASNDLXXXXXXXXXXXXXSASREIATTSPTSSTLRGIPIMSASPTSGVTFTECTPGDSDTCYDQLEPSMKGLLVERSRGLTCEESCLIDGGLWCDALGLSGCRFCATSCDNFCTEQGLPDDCECIEC 1349
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1520.3917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC09_ECTSI1.480e-7597.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD92_9PHAE2.510e-7095.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1520contigEcto-sp13_S_contig1520:14390..16077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1520.3917.1mRNA_Ecto-sp13_S_contig1520.3917.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1520 14039..16081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1520.3917.1 ID=prot_Ecto-sp13_S_contig1520.3917.1|Name=mRNA_Ecto-sp13_S_contig1520.3917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=467bp
MPTTSETASPTTTDREIDSPSMAPTSMVDSTSAPTDAMPTTVETESPTTT
DRELPAASMAPTSVVDSTSAPTDAMPTTVETASPTTTDREIDPPSMAPTS
VVDSTSAPTDAMSTTPETASPTTTDREIDSPSLAPTSVVDPTSAPTDGMP
TTVETASPTTTDREIDSPSMAPTSMVDSTSAPTDAMPTTPETASPTTTDR
EIDSPSMAPTSVVDPTSAPTDGMPTATETSSPTITDREIDSPSMAPTSVV
ESTSAPTDGMPTTVETASPTTTDREIDSPSMAPTTSDILEPSVSPTPGST
GYETPSPTPSMRGVDRETQSPTTSDGSRGGLNFETQSPTASNDLSRGGID
FETQSPTSTSREIATASPTSSTSRGIPIMSASPTSGVTFTECTPGDSDTC
YNQLEPSMKGLLVERSRGLTCEEICLVGGGLWCDALGLSGCRFCATSCDN
FCTEQGLPDDCECIEC*
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