prot_Ecto-sp13_S_contig1519.3912.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1519.3912.1
Unique Nameprot_Ecto-sp13_S_contig1519.3912.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length404
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1519.3912.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 4.010e-109
Identity = 168/184 (91.30%), Postives = 175/184 (95.11%), Query Frame = 0 
Query:  180 MSHEDKLVLLLQLANWTPVRKVKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDQSPWETDGAAGGAGAAKGTTPPGGAQKTRYLEERAGTAGGAGDLASLPAKECLDRS 363
            MS +DK +LLLQLA+W PVRKVKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQD+SPWET G AGGAGAA+GT P GGAQKTRY+E+RAGTA GAGDLAS PAKECLDRS
Sbjct:    1 MSQQDKKILLLQLADWNPVRKVKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEVEARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQRHQHLQQDESPWETGGTAGGAGAAEGTKPLGGAQKTRYVEDRAGTASGAGDLASSPAKECLDRS 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1519.3912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT37_ECTSI4.010e-10991.30C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1519contigEcto-sp13_S_contig1519:8214..16830 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1519.3912.1mRNA_Ecto-sp13_S_contig1519.3912.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1519 8214..16830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1519.3912.1 ID=prot_Ecto-sp13_S_contig1519.3912.1|Name=mRNA_Ecto-sp13_S_contig1519.3912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MNTAREWRSGHAIQVDIQPDKPRPRPRANGRAHPKAQEERPGSKAEERAI
EKKKVAARRQELLVGLGEEDKREMTSFMGLVNAQTRKTLQEVARTISKSG
QDPRMLKKKTLVHALARLDIDRSMLFLETMLSLGQDAMLQLLWLYERYNV
ANAGGGMTKCAMDHFGRDMGVNKVDELFNMSHEDKLVLLLQLANWTPVRK
VKVMKAWEATDPAMTAGFLLELIREEQARGEGPDSLWQCSLCPVKRNVEV
EARMKRGEHRRKDRTIDAGSLYDYRVKGSGGGPDTYSSAHESLFEFKQQR
HQHLQQDQSPWETDGAAGGAGAAKGTTPPGGAQKTRYLEERAGTAGGAGD
LASLPAKECLDRSGQREQQLQFVVTYAGVGFDPRRVCARCTGELRAAIIS
SGHD
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