prot_Ecto-sp13_S_contig15187.3909.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15187.3909.1
Unique Nameprot_Ecto-sp13_S_contig15187.3909.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15187.3909.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.900e-21
Identity = 51/76 (67.11%), Postives = 56/76 (73.68%), Query Frame = 0 
Query:    1 MKQADSCRLYVPVWSLDGLLEGWQAVFPHVPETVVQERFGKVGDVARAVFDAKKLWQVHRKMQRAASKMDLGVLQR 76
            MKQ  S R Y+P W LD L    QAVFPHVPET V+ERF KVG VARAVFDA+KL QV  KMQ AAS MDL +LQ+
Sbjct:  196 MKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETDVRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQ 271
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15187.3909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE5.900e-2167.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15187contigEcto-sp13_S_contig15187:172..504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15187.3909.1mRNA_Ecto-sp13_S_contig15187.3909.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15187 165..1422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15187.3909.1 ID=prot_Ecto-sp13_S_contig15187.3909.1|Name=mRNA_Ecto-sp13_S_contig15187.3909.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MKQADSCRLYVPVWSLDGLLEGWQAVFPHVPETVVQERFGKVGDVARAVF
DAKKLWQVHRKMQRAASKMDLGVLQRFCRVGLVTLTRFRPIGVVAHFCVC
RLAMKQVSRS*
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