prot_Ecto-sp13_S_contig15185.3908.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15185.3908.1
Unique Nameprot_Ecto-sp13_S_contig15185.3908.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15185.3908.1 vs. uniprot
Match: A0A6H5JNR4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNR4_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.410e-74
Identity = 115/121 (95.04%), Postives = 119/121 (98.35%), Query Frame = 0 
Query:    1 MSKAAAPARAVASRAAPAAPKRGMAGGAAPKYTGWEAQIREKLPKDEHVVVAISGFYVGLYVVCKGLSALFSSPKKEVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATIDKAQ 121
            MSKAAAPARAVASRAAPA PKRGMAGGAAP+YTGWEAQIREKLPKDEHVVVAISGFYVGLYV+ KG+SALFSSP+KEVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATIDKAQ
Sbjct:    7 MSKAAAPARAVASRAAPAVPKRGMAGGAAPEYTGWEAQIREKLPKDEHVVVAISGFYVGLYVLVKGISALFSSPEKEVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATIDKAQ 127
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BLAST of mRNA_Ecto-sp13_S_contig15185.3908.1 vs. uniprot
Match: A0A6U4IDD0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IDD0_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 2.590e-7
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:   20 PKRGMAGGAAPKYTGWEAQ--IREKLPKDEHVVVAISGFYVGLYVVCKGLSALFSSPKKEVAAPVVASSATSSD-IPDGYEDNFWQWLEGAGNMEKYLATID 118
            PKR   GGAA +Y        +R+ LP+D HVV+AI G Y  LY+    LS LFS  K          ++TSS  +    ++ F +W+   GN+EKY   ++
Sbjct:   28 PKR-FGGGAAVEYEPGSPDYIVRQYLPEDRHVVMAICGGYFSLYL----LSKLFSGGKXXXXXXXXXPASTSSSGVKSMADEGFAEWIAVDGNIEKYFKAVE 124
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BLAST of mRNA_Ecto-sp13_S_contig15185.3908.1 vs. uniprot
Match: A0A7R9UII2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UII2_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.210e-7
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 0 
Query:   20 PKRGMAGGAAPKYTGWEAQ--IREKLPKDEHVVVAISGFYVGLYVVCKGLSALFS--SPKKEVA--APVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATID 118
            PKR  AGGA  +Y        +R+ LP D+ +VVAI   Y G+Y+    LS LFS  S K+E A  AP  A++  +  +    ++ F  W+   GN EKYL + +
Sbjct:   39 PKR-FAGGAPTEYAPGSLDYIVRQYLPHDKQIVVAIVSGYFGIYL----LSTLFSGGSKKEETAEAAPAPAAAPAAGGVLSMEDEGFGDWIMQEGNFEKYLNSFE 138
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15185.3908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNR4_9PHAE2.410e-7495.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U4IDD0_9STRA2.590e-736.27Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UII2_9STRA3.210e-737.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15185contigEcto-sp13_S_contig15185:1028..3110 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15185.3908.1mRNA_Ecto-sp13_S_contig15185.3908.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15185 1028..3110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15185.3908.1 ID=prot_Ecto-sp13_S_contig15185.3908.1|Name=mRNA_Ecto-sp13_S_contig15185.3908.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
MSKAAAPARAVASRAAPAAPKRGMAGGAAPKYTGWEAQIREKLPKDEHVV
VAISGFYVGLYVVCKGLSALFSSPKKEVAAPVVASSATSSDIPDGYEDNF
WQWLEGAGNMEKYLATIDKAQ*
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