prot_Ecto-sp13_S_contig15165.3895.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15165.3895.1
Unique Nameprot_Ecto-sp13_S_contig15165.3895.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: D7FU74_ECTSI (RanBD1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU74_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 5.310e-43
Identity = 101/109 (92.66%), Postives = 101/109 (92.66%), Query Frame = 0
Query:    1 MSDFAQLAAKAKEDGVAAAAAPVDTXXXXXXXXXXXXXXXXXXXXEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL 109
            MSDFAQLAAKAKEDGVAA       XXXXXXXXXXXXXXXXXXXX EESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL
Sbjct:    1 MSDFAQLAAKAKEDGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFL 109          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A6H5KI29_9PHAE (RanBD1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI29_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.930e-38
Identity = 97/110 (88.18%), Postives = 97/110 (88.18%), Query Frame = 0
Query:    1 MSDFAQLAAKAKEDGVAAAAAPVDTXXXXXXXXXXXXXXXXXXXXEEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            MSDFAQLAAKAKEDG          XXXXXXXXXXXXXXXXXXXX   STAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ
Sbjct:    1 MSDFAQLAAKAKEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A7S2XZR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.280e-27
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0
Query:   48 ESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            ESTA FEPVVQL+E+EVKTHEE+EEVLWK R KLF+FGETLLNKGTGQK W ERGIGE KFL+
Sbjct:   68 ESTAHFEPVVQLDEIEVKTHEEEEEVLWKWRGKLFVFGETLLNKGTGQKTWNERGIGEFKFLK 130          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A835YXP9_9STRA (RanBP1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXP9_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.270e-25
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            E E T  FEPVVQL+EVEVKTHEEDE+VL+KMRAKLF+FGETLLNKG+G K W ERG+GEVKFL+
Sbjct:   42 EAECTTVFEPVVQLDEVEVKTHEEDEQVLYKMRAKLFVFGETLLNKGSGTKTWNERGVGEVKFLK 106          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A8J2T1Z3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T1Z3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.430e-23
Identity = 48/64 (75.00%), Postives = 59/64 (92.19%), Query Frame = 0
Query:   47 EESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            +ESTA+F PVVQL+EVEVKTHEEDE+V +K+RAKLF F ETLLNKG+G+KEW+ERG+GEVK L+
Sbjct:   93 QESTAEFTPVVQLDEVEVKTHEEDEDVDFKIRAKLFRFSETLLNKGSGKKEWIERGVGEVKILK 156          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A6S8ZTG3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZTG3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.270e-23
Identity = 48/65 (73.85%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            EEESTA F+PVV+LEEVEVK+ EEDEEV++ MRAKLF+FGETLL+KGTG K W ERGIGE + L+
Sbjct:   26 EEESTATFKPVVELEEVEVKSGEEDEEVVFSMRAKLFLFGETLLDKGTGNKSWRERGIGEARILR 90          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A7S3NPI9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPI9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.680e-22
Identity = 46/65 (70.77%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            E EST +F PVVQL+EVEVKT EEDEE+++KMRA+L+ F ETLLNKGTG+KEW+ERG+GE K L+
Sbjct:   79 EAESTQEFTPVVQLDEVEVKTLEEDEEIIFKMRARLYRFAETLLNKGTGKKEWIERGVGEAKLLK 143          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A7S0C0M0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0M0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 7.280e-22
Identity = 46/65 (70.77%), Postives = 56/65 (86.15%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            EEESTA FEPVV+LEEVE K+ EEDEE+L  MR KLF++GETLL+KGTG+K W ERGIGE++ L+
Sbjct:   35 EEESTATFEPVVRLEEVETKSGEEDEEILHGMRCKLFVYGETLLDKGTGKKSWRERGIGEIRLLK 99          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A7R9ZPH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPH3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.400e-21
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            E+ESTAQFEPVV+LEEV+VK+ EEDEEV++ +R+KLFIFGETLL+ GTG K W ERGIGE K L+
Sbjct:   91 EDESTAQFEPVVKLEEVDVKSGEEDEEVVYGIRSKLFIFGETLLDVGTGNKSWKERGIGEAKILR 155          
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Match: A0A7S2EXM6_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EXM6_TRICV)

HSP 1 Score: 92.8 bits (229), Expect = 3.400e-21
Identity = 46/65 (70.77%), Postives = 58/65 (89.23%), Query Frame = 0
Query:   46 EEESTAQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVERGIGEVKFLQ 110
            EEESTA FEPVV+L+EVEV++ EEDEEV++ +R+KLFI+GETLL+KGTG+K W ERGIGE K L+
Sbjct:   22 EEESTATFEPVVKLDEVEVQSGEEDEEVVFGVRSKLFIYGETLLDKGTGKKTWRERGIGEAKILR 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15165.3895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU74_ECTSI5.310e-4392.66RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KI29_9PHAE3.930e-3888.18RanBD1 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2XZR9_9STRA5.280e-2782.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YXP9_9STRA1.270e-2578.46RanBP1 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8J2T1Z3_9STRA1.430e-2375.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6S8ZTG3_9STRA8.270e-2373.85Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3NPI9_9STRA2.680e-2270.77Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S0C0M0_9STRA7.280e-2270.77Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A7R9ZPH3_9STRA2.400e-2172.31Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2EXM6_TRICV3.400e-2170.77Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 63..110
e-value: 2.6E-10
score: 40.6
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 52..110
score: 17.034
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 2..110
e-value: 4.0E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 17..110
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 51..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15165contigEcto-sp13_S_contig15165:581..2414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15165.3895.1mRNA_Ecto-sp13_S_contig15165.3895.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15165 581..2414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15165.3895.1 ID=prot_Ecto-sp13_S_contig15165.3895.1|Name=mRNA_Ecto-sp13_S_contig15165.3895.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=111bp
MSDFAQLAAKAKEDGVAAAAAPVDTTSETAAPASAAVDEGAGAAAEEEST
AQFEPVVQLEEVEVKTHEEDEEVLWKMRAKLFIFGETLLNKGTGQKEWVE
RGIGEVKFLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf