prot_Ecto-sp13_S_contig15154.3885.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15154.3885.1
Unique Nameprot_Ecto-sp13_S_contig15154.3885.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length236
Homology
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A6H5JHU6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHU6_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 1.200e-154
Identity = 229/233 (98.28%), Postives = 231/233 (99.14%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARILHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDL+ENHGLGR MRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARILHAELFT MGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVG+
Sbjct:  142 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLLENHGLGRSMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARILHAELFTHMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGL 374          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: D7FSF4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF4_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 3.460e-150
Identity = 228/235 (97.02%), Postives = 230/235 (97.87%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGR MRDLDTL+FDEADQLLEMGFRPAIENILRNLQASK  RQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI  LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVG+
Sbjct:  202 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRDMRDLDTLVFDEADQLLEMGFRPAIENILRNLQASKTYRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARIVQLHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGL 436          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A835ZDJ4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDJ4_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.230e-82
Identity = 140/235 (59.57%), Postives = 170/235 (72.34%), Query Frame = 0
Query:    3 FHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPD--HKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            F  ++L C  GG N+  DL +L+   PDI+VATPGRL D +EN  L R +  L  L+ DEADQLLEMGFRPAIE  LRNL    A RQTL+FSATMP DV+AI+ IAM+P +E+VD VGEEE+TH+HVPQ   V  M   +P+LL  + +A  D D  HKIIVFF  AR+   HAEL   MG+ VLE HSRKSQ+ RT+V++ FRNG G IMFTSDV+ARGMDYPDV+ VIQVG+
Sbjct:  102 FMGMRLQCIFGGTNIKADLRKLSDATPDILVATPGRLNDHLENQTLARQLAGLSALVLDEADQLLEMGFRPAIEAALRNLPPPSA-RQTLLFSATMPQDVRAISRIAMRPDFELVDTVGEEESTHEHVPQSAVVTTMEHGVPQLLLLLRRAVHDADGAHKIIVFFTTARLTQFHAELCNAMGMPVLEIHSRKSQSQRTKVSDQFRNGSGLIMFTSDVTARGMDYPDVTSVIQVGI 335          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A6H5L2V2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V2_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.770e-79
Identity = 139/237 (58.65%), Postives = 171/237 (72.15%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILK--AKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            ++FH + L+C VGG N+  D+       PDI+VATPGRL D ++N+GL + M  L  LIFDEADQLLEMGFRPAIE ILR +  S+  RQTL+FSATMPGDV+ IA +A+K  YE VDCVGEEE+THQHVPQ++ V    +Q+  L   + +  A +   HKIIVFF  AR+   +AEL   MG  VLE HSRKSQ  R +V+E FRNG+G +MFTSDVSARGMDYPDVS VIQVG+
Sbjct:  141 LTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGL 375          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: D8LUB6_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB6_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 4.920e-79
Identity = 139/237 (58.65%), Postives = 171/237 (72.15%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILK--AKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            ++FH + L+C VGG N+  D+       PDI+VATPGRL D ++N+GL + M  L  LIFDEADQLLEMGFRPAIE ILR +  S+  RQTL+FSATMPGDV+ IA +A+K  YE VDCVGEEE+THQHVPQ++ V    +Q+  L   + +  A +   HKIIVFF  AR+   +AEL   MG  VLE HSRKSQ  R +V+E FRNG+G +MFTSDVSARGMDYPDVS VIQVG+
Sbjct:  241 LTFHDMSLICVVGGTNIKADIRGFRD-RPDIVVATPGRLNDHLDNNGLAKDMAGLSHLIFDEADQLLEMGFRPAIEAILRYMPHSR-DRQTLLFSATMPGDVRKIAQLALKERYEFVDCVGEEESTHQHVPQQYTVCGQDQQVEELCQLLRENMAADPRGHKIIVFFTTARLTQFYAELCNLMGFPVLEIHSRKSQGHRNKVSELFRNGQGLVMFTSDVSARGMDYPDVSAVIQVGL 475          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A7S2UXM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM4_9STRA)

HSP 1 Score: 245 bits (626), Expect = 7.650e-76
Identity = 125/236 (52.97%), Postives = 167/236 (70.76%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAP-DIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARILH--AELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            ++FH+  L    GG N++RDL +   G P D++VATPGRL D ++NHGL   M  L  LI DE DQLL+MGFRPAIE I+  L   K  RQ L+FSAT+P DVQ IA +A+ P Y +VDCVGEE++TH+HVPQ + V  M++Q+  L A + +A + P +K++ FF  AR+    AELF ++G+ VLE HSRKSQ  RTR +++FR G   +MFTSDVSARGMDYP+V+ V+QVG+
Sbjct:   16 LTFHQYTLATFFGGTNMSRDLKRFQQGPPPDLVVATPGRLEDHLQNHGLRDHMASLKVLILDECDQLLDMGFRPAIERIIGWLPP-KQGRQNLLFSATLPQDVQTIARVALNPRYAMVDCVGEEQSTHEHVPQSYLVCSMSDQLKELYALVREAMQQPGYKVLAFFTTARMTQFFAELFVKLGIPVLEIHSRKSQKYRTRTSDSFRKGSNLVMFTSDVSARGMDYPNVTSVVQVGL 250          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A7S3XXC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXC6_HETAK)

HSP 1 Score: 238 bits (608), Expect = 3.160e-73
Identity = 128/234 (54.70%), Postives = 160/234 (68.38%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENH-GLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQV 231
            + FH L L    GG  + +D++  N   PDI+VATPGRLLD +EN  G       L  LI DE DQLL+MGFRP+I  IL++L   K+ RQTL+FSATMP DVQ +A   + PSYE+VDCVG+E  THQ VPQ F V  + +Q+  L   I + ++ P HK+IVFF  AR+   +AE+F  MGV VLE HSRKSQ  RT+V++ FR G G +MFTSDVSARGMDYPDV+ VIQV
Sbjct:  199 LKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPP-KSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVPGHKLIVFFTTARLTQFYAEVFNFMGVPVLEIHSRKSQGHRTKVSDQFRTGNGLVMFTSDVSARGMDYPDVTGVIQV 431          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A7S4D8Q7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8Q7_HETAK)

HSP 1 Score: 241 bits (615), Expect = 3.920e-73
Identity = 129/236 (54.66%), Postives = 162/236 (68.64%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENH-GLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            + FH L L    GG  + +D++  N   PDI+VATPGRLLD +EN  G       L  LI DE DQLL+MGFRP+I  IL++L   K+ RQTL+FSATMP DVQ +A   + PSYE+VDCVG+E  THQ VPQ F V  + +Q+  L   I + ++ P HK+IVFF  AR+   +AE+F  MGV VLE HSRKSQ  RT+V++ FR G G +MFTSDVSARGMDYPDV+ VIQVG+
Sbjct:  119 LKFHDLGLQVVFGGTKMTKDVSSFNRRTPDILVATPGRLLDHLENTPGFREACAGLQCLILDECDQLLDMGFRPSIVKILQHLPP-KSGRQTLLFSATMPQDVQEMARFGLNPSYELVDCVGKEAGTHQQVPQTFLVCSVEDQLGELAQIIAEGRQVPGHKLIVFFTTARLTQFYAEVFNFMGVPVLEIHSRKSQGHRTKVSDQFRTGNGLVMFTSDVSARGMDYPDVTGVIQVGM 353          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A7S1J8E5_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J8E5_9EUGL)

HSP 1 Score: 239 bits (610), Expect = 8.330e-73
Identity = 133/238 (55.88%), Postives = 172/238 (72.27%), Query Frame = 0
Query:    1 MSFHR-LKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGRGMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKE-DP-DHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            ++FH+ ++ +   GG  + RDL+ L +  PD++VATPGRL D +E+ G+   +  L TLIFDEADQLLEMGFRPAIE +LR L   K++R+TL+FSATMP DV+AIA  A++ SY+ VDCVG E++THQHVPQ   V  + EQ+  L+A + KA   DP D KIIVFF  AR+   +AE+F   G+  LE HSRKSQ+ RT+V++ FR G    MFTSDVSARGMDYPDVS VIQVG+
Sbjct:  102 LTFHQGIRSLVVFGGTPIKRDLSALQT-PPDLLVATPGRLNDHLEHSGIQSKITKLQTLIFDEADQLLEMGFRPAIETMLRMLPP-KSTRRTLLFSATMPADVKAIAKFALRDSYDFVDCVGAEQSTHQHVPQTSVVCTLQEQLVNLIAQVQKAMAADPQDFKIIVFFTTARLTQFYAEVFNHAGIPTLEIHSRKSQSHRTKVSDKFREGSRLCMFTSDVSARGMDYPDVSAVIQVGM 337          
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Match: A0A7S3XX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX82_HETAK)

HSP 1 Score: 239 bits (611), Expect = 1.720e-71
Identity = 130/237 (54.85%), Postives = 166/237 (70.04%), Query Frame = 0
Query:    1 MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLG-RGM-RDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPGDVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATILKAKEDPDHKIIVFFVAARI--LHAELFTQMGVDVLETHSRKSQAARTRVAEAFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGV 233
            + FH L L   VGG  +++D   L    PDI+VATPGRL  L++    G RG    L  L+ DE DQLL+MGFRP+I  ILR L   KA RQ+L+FSAT+P DVQ IA + +KPSYE+VDCVGEEE+TH+HVPQ   V  M  Q+  L   + + ++ P HKIIVFF  AR+   +AE+F  MGV VLE HSRKSQ+ART+++E FR  +G +MF+SDVSARGMDYPDV+ V+QVG+
Sbjct:  235 LKFHDLGLQTVVGGTKMSKDAAALRRRTPDIVVATPGRLEALLDEDTAGFRGACAGLRVLVMDECDQLLDMGFRPSILRILRGLPP-KAGRQSLLFSATLPRDVQEIAGLGLKPSYELVDCVGEEESTHRHVPQSVLVCSMETQLAELAQIVEEGRQVPGHKIIVFFTTARLTQFYAEIFNFMGVPVLEMHSRKSQSARTKISEQFRTQQGVVMFSSDVSARGMDYPDVTQVVQVGM 470          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15154.3885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHU6_9PHAE1.200e-15498.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FSF4_ECTSI3.460e-15097.02DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDJ4_9STRA1.230e-8259.57P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5L2V2_9PHAE1.770e-7958.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LUB6_ECTSI4.920e-7958.65DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S2UXM4_9STRA7.650e-7652.97Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3XXC6_HETAK3.160e-7354.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D8Q7_HETAK3.920e-7354.66Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1J8E5_9EUGL8.330e-7355.88Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A7S3XX82_HETAK1.720e-7154.85Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 170..235
e-value: 7.3E-4
score: 28.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 147..232
e-value: 1.7E-11
score: 44.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 145..235
score: 10.34
NoneNo IPR availableGENE3D3.40.50.300coord: 1..117
e-value: 2.1E-30
score: 107.5
NoneNo IPR availableGENE3D3.40.50.300coord: 124..235
e-value: 2.8E-20
score: 74.8
NoneNo IPR availablePANTHERPTHR24031:SF384DEAD-BOX ATP-DEPENDENT RNA HELICASE 31coord: 7..233
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 7..233
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 5..104
e-value: 7.4E-21
score: 74.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..116
score: 17.96
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15154contigEcto-sp13_S_contig15154:120..3423 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15154.3885.1mRNA_Ecto-sp13_S_contig15154.3885.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15154 120..3426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15154.3885.1 ID=prot_Ecto-sp13_S_contig15154.3885.1|Name=mRNA_Ecto-sp13_S_contig15154.3885.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=236bp
MSFHRLKLMCSVGGVNVNRDLNQLNSGAPDIMVATPGRLLDLMENHGLGR
GMRDLDTLIFDEADQLLEMGFRPAIENILRNLQASKASRQTLMFSATMPG
DVQAIASIAMKPSYEVVDCVGEEENTHQHVPQKFAVVPMAEQIPRLLATI
LKAKEDPDHKIIVFFVAARILHAELFTQMGVDVLETHSRKSQAARTRVAE
AFRNGKGQIMFTSDVSARGMDYPDVSLVIQVGVFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase