prot_Ecto-sp13_S_contig15151.3883.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15151.3883.1
Unique Nameprot_Ecto-sp13_S_contig15151.3883.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length175
Homology
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: D7G827_ECTSI (40S ribosomal protein S6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G827_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 4.180e-103
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYA 161
            MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKG+QDIPGLTDAPVPRRLGPKRANNIRKLFNLGK+DDVRKYVIARKFEKKGKTVTKRP+IQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYA
Sbjct:   49 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGEQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKDDDVRKYVIARKFEKKGKTVTKRPHIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYA 209          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A836CDZ2_9STRA (40S ribosomal protein S6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDZ2_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.990e-82
Identity = 130/167 (77.84%), Postives = 143/167 (85.63%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMR 167
            +FRISGGNDKQGFPMKQGVL  +RVRLLL KG+SCYR RR+GERKRKSVRGCIV +DLAVLNLV+ KKG+ ++PGLTD  VPRRLGPKRAN IRKLFNL KEDDVRKYVIARKFEKKGKTVTKRP IQRLITP +LQR R RA+ KK AQ KS+ DA+EY R    R
Sbjct:   49 VFRISGGNDKQGFPMKQGVLCNHRVRLLLSKGLSCYRPRRKGERKRKSVRGCIVGSDLAVLNLVIVKKGEGEVPGLTDVTVPRRLGPKRANKIRKLFNLSKEDDVRKYVIARKFEKKGKTVTKRPKIQRLITPAKLQRTRRRASLKKQAQVKSKADAAEYGRLYAQR 215          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A7S2RIP4_9STRA (40S ribosomal protein S6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIP4_9STRA)

HSP 1 Score: 236 bits (601), Expect = 6.950e-76
Identity = 125/169 (73.96%), Postives = 141/169 (83.43%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKK-GKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMRS 168
            +FRISGGNDKQGFPMKQGVLS  RVRLLLHKG SCYRQR+ GERKRKSVRGCIV +DLAVLNLVVTKKGD +I GLTDA VPRRLGPKRA+ IR+LFNL KEDDVRK V+ R FE K GKTVTK P IQRL+TP+ LQRKRAR AAK  A  K++ +A+EY++    R+
Sbjct:   49 VFRISGGNDKQGFPMKQGVLSNTRVRLLLHKGASCYRQRKTGERKRKSVRGCIVGSDLAVLNLVVTKKGDAEIEGLTDASVPRRLGPKRASKIRQLFNLDKEDDVRKVVVRRSFENKAGKTVTKSPKIQRLVTPLTLQRKRARKAAKVAAVEKARTEAAEYSKLRAQRA 217          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: F0YLS6_AURAN (40S ribosomal protein S6 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLS6_AURAN)

HSP 1 Score: 225 bits (573), Expect = 1.320e-71
Identity = 124/168 (73.81%), Postives = 134/168 (79.76%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMR 167
            +FRI+GGNDKQGFPMKQGVL  +RVRLLL  G SCYRQRR GERKRKSVRGCIV ADLAVLNLVV K+GD DI GLTD PV  RLGPKRAN IRKLF L K+DDVRKYVIARKFE KKGK+VTK P IQRLITP+ LQRKR R   K  A  K++ +A EY R   MR
Sbjct:   49 VFRITGGNDKQGFPMKQGVLCNHRVRLLLRAGASCYRQRRAGERKRKSVRGCIVGADLAVLNLVVVKQGDADIEGLTDTPVAVRLGPKRANKIRKLFALTKDDDVRKYVIARKFENKKGKSVTKAPKIQRLITPLCLQRKRDRKRVKMAAITKAKAEAVEYNRVKTMR 216          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: W7TEA2_9STRA (40S ribosomal protein S6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEA2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.880e-70
Identity = 115/163 (70.55%), Postives = 135/163 (82.82%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFE-KKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYAR 162
            +F+ISGGNDKQGFPMKQGVL+  RVRLLL KG+SCYR RR+GERKRKSVRG IV  DL+VLNLV+ K+G++D+ GLTD+ VPRRLGPKRANNIRKLFNL K+ DV  Y + RKFE KKGKTV K+P IQRLITP+RLQ KR R  AKK A  K++ +A+EY R
Sbjct:   49 VFKISGGNDKQGFPMKQGVLTDQRVRLLLRKGLSCYRARRKGERKRKSVRGAIVGPDLSVLNLVLVKRGEEDVVGLTDSAVPRRLGPKRANNIRKLFNLSKDADVTTYPVERKFENKKGKTVVKKPKIQRLITPLRLQHKRRRLEAKKAATTKAKAEAAEYHR 211          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A7S0LPA9_9EUKA (40S ribosomal protein S6 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LPA9_9EUKA)

HSP 1 Score: 220 bits (561), Expect = 7.950e-70
Identity = 114/167 (68.26%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMR 167
            +FRISGGNDKQGFPMKQGVL+  RVRLLL +GVSCYR RR GERKRKSVRGCIV +DLAVLNLV+ KKGD +I G TD  +P+RLGPKRA+ IR LFNL K DDVRKYVIAR FEKKGKT+TKRP IQRL+TP+ ++RK+ R    K A   S+ +A+ Y   V  R
Sbjct:   49 IFRISGGNDKQGFPMKQGVLTNTRVRLLLKEGVSCYRARRVGERKRKSVRGCIVGSDLAVLNLVIIKKGDNEIEGFTDVSIPKRLGPKRASKIRNLFNLTKADDVRKYVIARTFEKKGKTITKRPKIQRLVTPVTIRRKKQREVKAKKALENSKAEAAAYTALVHKR 215          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A6S8WE49_9STRA (40S ribosomal protein S6 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8WE49_9STRA)

HSP 1 Score: 218 bits (556), Expect = 1.800e-69
Identity = 117/168 (69.64%), Postives = 134/168 (79.76%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKF-EKKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMR 167
            +FRISGGNDKQGFPM+QG+L+  RVRLL+ KG  CYRQRR GERKRKSVRGCIV  D+AVLNLVVTK GD DIPGLTD  VPRRLGPKRANNIRKLFNL K+DDVR+YVIAR+F  KKG  V K P IQRLITP+ LQRKRA  A K  +  +++ +A+ Y + V  R
Sbjct:   18 IFRISGGNDKQGFPMRQGILTNTRVRLLMQKGHKCYRQRRTGERKRKSVRGCIVGQDIAVLNLVVTKIGDNDIPGLTDDSVPRRLGPKRANNIRKLFNLTKDDDVRQYVIAREFTNKKGVQVRKAPKIQRLITPLTLQRKRAIKAKKMKSVLRNKDEAAAYRKVVAQR 185          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A7S3ZJK9_9STRA (40S ribosomal protein S6 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJK9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.960e-68
Identity = 119/163 (73.01%), Postives = 127/163 (77.91%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKK-GKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYAR 162
            +FRISGGNDKQGFPMKQGVL  +RV+LLL  G SCYRQRR GERKRKSVRGC+V  DLAVLNLVV K+GD +I GLTD  VP RLGPKRAN IRKLF L KEDDVRKYVI RKF KK GK VTK P IQRLITPI LQRKR     K    AK ++DA EY R
Sbjct:   49 VFRISGGNDKQGFPMKQGVLCNHRVKLLLRAGASCYRQRRSGERKRKSVRGCVVGPDLAVLNLVVVKQGDAEIEGLTDTQVPVRLGPKRANKIRKLFALSKEDDVRKYVIRRKFTKKNGKEVTKAPKIQRLITPIMLQRKRDMKRKKMAQVAKVKKDAEEYHR 211          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A1A7Y5M1_9TELE (40S ribosomal protein S6 n=8 Tax=Clupeocephala TaxID=186625 RepID=A0A1A7Y5M1_9TELE)

HSP 1 Score: 216 bits (549), Expect = 6.770e-68
Identity = 116/168 (69.05%), Postives = 133/168 (79.17%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKKGKTV-TKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEYARCVIMR 167
            M RISGGNDKQGFPMKQGVL+  RVRLLL KG SCYR RR GERKRKSVRGCIV A+L+VLNLV+ KKG++DIPGLTD+ VPRRLGPKRA+ IRKLFNL KEDDVR+YV+ R   K+GK   TK P IQRL+TP  LQ KR R A KK    K++ +ASEYA+ +  R
Sbjct:   49 MVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIIKKGEKDIPGLTDSTVPRRLGPKRASKIRKLFNLAKEDDVRQYVVRRPLSKEGKKARTKAPKIQRLVTPRVLQHKRRRIALKKQRTQKNKEEASEYAKLLAKR 216          
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Match: A0A137PCW8_CONC2 (40S ribosomal protein S6 n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PCW8_CONC2)

HSP 1 Score: 214 bits (544), Expect = 2.580e-67
Identity = 113/163 (69.33%), Postives = 130/163 (79.75%), Query Frame = 0
Query:    1 MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVRGCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLGKEDDVRKYVIARKFEKKG---KTVTKRPNIQRLITPIRLQRKRARAAAKKIAQAKSQRDASEY 160
            +FR++GGNDKQGFPMKQGVL  NR RLLL KG SCYR R+ GERKRKSVRGCIV +DLAVL+LVV K+G+Q+I GLTD  VP+RLGPKRAN IRK+FNL KEDDVRKYVI R+ + K    K  TK P IQRL+TP RLQRKRA  AAKK   A+S+  A+EY
Sbjct:   49 VFRVTGGNDKQGFPMKQGVLLPNRTRLLLSKGHSCYRPRKTGERKRKSVRGCIVGSDLAVLSLVVVKQGEQEIAGLTDTVVPKRLGPKRANKIRKMFNLSKEDDVRKYVIRREVQPKDADKKPYTKAPKIQRLVTPQRLQRKRAEVAAKKTRAARSKAQAAEY 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15151.3883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G827_ECTSI4.180e-10398.1440S ribosomal protein S6 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CDZ2_9STRA2.990e-8277.8440S ribosomal protein S6 n=1 Tax=Tribonema minus T... [more]
A0A7S2RIP4_9STRA6.950e-7673.9640S ribosomal protein S6 n=1 Tax=Rhizochromulina m... [more]
F0YLS6_AURAN1.320e-7173.8140S ribosomal protein S6 n=1 Tax=Aureococcus anoph... [more]
W7TEA2_9STRA2.880e-7070.5540S ribosomal protein S6 n=2 Tax=Monodopsidaceae T... [more]
A0A7S0LPA9_9EUKA7.950e-7068.2640S ribosomal protein S6 n=1 Tax=Coccolithus braar... [more]
A0A6S8WE49_9STRA1.800e-6969.6440S ribosomal protein S6 n=1 Tax=Chaetoceros debil... [more]
A0A7S3ZJK9_9STRA1.960e-6873.0140S ribosomal protein S6 n=1 Tax=Pelagomonas calce... [more]
A0A1A7Y5M1_9TELE6.770e-6869.0540S ribosomal protein S6 n=8 Tax=Clupeocephala Tax... [more]
A0A137PCW8_CONC22.580e-6769.3340S ribosomal protein S6 n=1 Tax=Conidiobolus coro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 134..154
IPR001377Ribosomal protein S6eSMARTSM01405Ribosomal_S6e_2coord: 1..78
e-value: 1.7E-31
score: 120.6
IPR001377Ribosomal protein S6ePFAMPF01092Ribosomal_S6ecoord: 1..78
e-value: 9.3E-35
score: 119.3
IPR001377Ribosomal protein S6ePANTHERPTHR1150240S RIBOSOMAL PROTEIN S6coord: 1..167
IPR018282Ribosomal protein S6e, conserved sitePROSITEPS00578RIBOSOMAL_S6Ecoord: 4..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15151contigEcto-sp13_S_contig15151:1512..2374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15151.3883.1mRNA_Ecto-sp13_S_contig15151.3883.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15151 1512..2374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15151.3883.1 ID=prot_Ecto-sp13_S_contig15151.3883.1|Name=mRNA_Ecto-sp13_S_contig15151.3883.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp
MFRISGGNDKQGFPMKQGVLSANRVRLLLHKGVSCYRQRRRGERKRKSVR
GCIVAADLAVLNLVVTKKGDQDIPGLTDAPVPRRLGPKRANNIRKLFNLG
KEDDVRKYVIARKFEKKGKTVTKRPNIQRLITPIRLQRKRARAAAKKIAQ
AKSQRDASEYARCVIMRSCRGLAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001377Ribosomal_S6e
IPR018282Ribosomal_S6e_CS