mRNA_Ecto-sp13_S_contig15144.3879.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15144.3879.1
Unique NamemRNA_Ecto-sp13_S_contig15144.3879.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A6H5JNW3_9PHAE (PlsC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNW3_9PHAE)

HSP 1 Score: 612 bits (1577), Expect = 3.290e-215
Identity = 344/359 (95.82%), Postives = 348/359 (96.94%), Query Frame = 2
Query:  308 MPCCEHHAD-HDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPSQWPRWAWICLGVWVLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQKXXXXXXXXXXXXXXGTGSTPVIESKKTK 1381
            MPCCEHHAD HD  XXXXXXXXXXXXXXXXXXXXXXXXXXXQPSQWPRWAW+CLGVWVL+SCYFLLFAVAMYLQELKSYGGASRVS PKMLAFSLTWMNGSLL SALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSV+KMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEP+RPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQKXXXXXXXXXX     TGSTP IESKKTK
Sbjct:    1 MPCCEHHADDHDSHXXXXXXXXXXXXXXXXXXXXXXXXXXXQPSQWPRWAWVCLGVWVLLSCYFLLFAVAMYLQELKSYGGASRVSFPKMLAFSLTWMNGSLLCSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPVRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQKXXXXXXXXXXGER--TGSTPAIESKKTK 357          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: D8LS64_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS64_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 2.400e-129
Identity = 199/229 (86.90%), Postives = 200/229 (87.34%), Query Frame = 2
Query:  695 MGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQRKQKXXXXXXXXXXXXXXGTGSTPVIESKKTK 1381
            MGQLMFRILSKPPVVIGLENLP DGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSV+KMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVM             RKQK              G GSTPVIESKKTK
Sbjct:    1 MGQLMFRILSKPPVVIGLENLPSDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVM-------------RKQKEAAAAAAMAGE---GAGSTPVIESKKTK 213          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A835YS94_9STRA (PlsC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS94_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.080e-69
Identity = 119/233 (51.07%), Postives = 166/233 (71.24%), Query Frame = 2
Query:  596 MNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDC-KERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFH-GPRQRTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALPYAEGMLEDQR 1288
            M  S L S   IP LL+G+R+RA E  HY G ++ + + RI   P V+ G+ENLPP  E   VYV+NHQ++VDIA+F+ I   R ++WVSK++VFL+PGVGLLM++AGYV+L RG+++S +KM +DC K+ L  GWSV+IFPQGTRRR K+LDFK GAF+LA ++   +VP T++LPE ++  G + R ++ +H+PI P DP F+D   L  H F T++GAL Y   ML+ QR
Sbjct:    1 MTLSFLGSLPAIPLLLIGQRKRARELTHYNGGVIARTLQRICFYPSVITGMENLPPP-ETACVYVANHQSTVDIAVFFAI--RRNYAWVSKASVFLVPGVGLLMRLAGYVSLQRGSKESGKKMMEDCRKDCLEKGWSVVIFPQGTRRRHKILDFKMGAFKLAQEARVPIVPVTIELPEKMYGIGCKDRPRLIIHKPIAPDDPLFQDRDALLAHTFGTIVGALSYGPAMLQRQR 230          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A7S2UZR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR3_9STRA)

HSP 1 Score: 179 bits (454), Expect = 4.910e-48
Identity = 114/292 (39.04%), Postives = 167/292 (57.19%), Query Frame = 2
Query:  437 QWPRWAWICLG-VWVLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKV----HYYGSIMGQLMFRILSKPPVVIGLENLPPDGE-KG--------MVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAG-----------WSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQR----TKITVHEPIRPGDPAFKDVATLRK 1225
            +WP    + LG ++VL   + L++  A+YLQE+K+Y    +V + +   F+L W+ GS        P  +    +    KV    H    ++ + MFR     P V+G+ENLP   E KG        ++YV NHQ+ +DIALFY++  ER+F+WVSKSTVF IPGVG +M +A Y+ L RG  +S+ KMF  C++ L A            +SV IFPQGTRRR ++L FK GAFQLA+++   VVP T+ LP +++  P  R     K+ VH+P+ P D  FK +  +R+
Sbjct:    2 EWPEVLGLVLGLIFVLFFIWALVYVFAIYLQEMKTY---KKVHVLRFSLFTLKWIYGSAYFVICLFPTWVSVGFQAFHPKVRALGHKKAGVLARWMFRSTFHEPEVVGMENLPAIPEDKGRGKFEHDAVIYVVNHQSMIDIALFYFV--ERRFAWVSKSTVFTIPGVGWIMTMAQYIPLERGKGESIAKMFGLCRKSLGASPEGDNTKKADSFSVTIFPQGTRRRFELLPFKAGAFQLAMETGCRVVPITMYLPPDIWFNPSARGGDKCKLIVHKPMDPKD--FKTMEAMRE 286          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A024U0I6_9STRA (PlsC domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0I6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.270e-43
Identity = 100/261 (38.31%), Postives = 151/261 (57.85%), Query Frame = 2
Query:  479 LVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQ-RTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALP 1258
            +V+ +  +    +Y +E K +   +     K+L F L W+  S +   L +P   +          H    ++ + +  +   P VV G  N+ PD  K  + V+NHQT +DI   Y++G    FSWVSKS +FLIPG G LMK+A YV LTR N+ SV +MF+  K+R A GWSV++FPQGTRRR + L FKDGAF LA+D+N  ++P T+ +P++L+   R  + K+ + +PI  G+ A KD   L++  +D V+  LP
Sbjct:    9 VVAAFISIAVFMIYFEEKKLFVNFAH---GKILLFGLFWVIVSWIEFMLILPLKFVVAPNELHIVAHETCMVVARTLHVLFFGPVVVEGRMNVNPD--KVYMIVANHQTMMDITSLYFLGGN--FSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELAKDRFAHGWSVVVFPQGTRRRTEFLPFKDGAFDLAVDANVEILPVTIIIPDDLWTWNRLGKVKLVIGKPIAVGN-ATKD--ELKQKAYDVVLSNLP 259          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: W4G7D7_9STRA (PlsC domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7D7_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.690e-43
Identity = 101/248 (40.73%), Postives = 146/248 (58.87%), Query Frame = 2
Query:  518 YLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQ-RTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALP 1258
            Y +E K +   + ++  K+L F L W+  S L  AL +P  L+          H    ++ + +  +   P VV G  N  PD E  M+ V+NHQT +DI   Y++G    FSWVSKS +FLIPG G LMK+A YV LTR N+ SV +MF+  ++R A GWSV++FPQGTRRR + L FKDGAF LAI +   V+P T+ +P++L+   R  + K+ + +PI   D   ++   L++  FD V+G LP
Sbjct:   22 YYEEKKHF---ANIAHGKILLFGLFWVLVSALQFALVLPLKLVLAPNELHIVAHETCQVVARSLHVLFFGPVVVEGRPNANPD-EVYMI-VANHQTMMDITSLYFLGGN--FSWVSKSIIFLIPGAGWLMKLANYVPLTRKNKTSVLRMFELARDRFANGWSVVVFPQGTRRRTEFLPFKDGAFDLAIGAKVRVLPVTIIIPDDLWTWNRLGKVKLVIGKPIAIEDGMTRE--QLKQKAFDVVLGNLP 260          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A7S3Y3G5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3G5_HETAK)

HSP 1 Score: 163 bits (412), Expect = 2.760e-42
Identity = 87/223 (39.01%), Postives = 138/223 (61.88%), Query Frame = 2
Query:  476 VLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAE---KVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLF 1135
            VL S +    A  MY QE +SYG    V   +   FSL  + GS++   L +P ++  R  ++ +           + + +FR     PVV GLENLP +G++ +V+V NHQ+ VD+AL +++  +R+F++VSK+  FL+PG G LM++  +V L RGN+ S+ +MF+ C + + +  +++IFPQGTR+R + + FKDGAF  A+D+N  VVP TL LP +L+
Sbjct:   47 VLYSLWVFFAAYMMYRQERRSYG---EVGFARAFFFSLFCLYGSMICCVLVLPVIVFERGTKSVKVRNTAFQKNQQVSKKIFRFFFGDPVVQGLENLPQEGDRPVVFVMNHQSMVDVALSFFL--DRRFAFVSKAITFLLPGAGTLMRLCHFVPLKRGNKASILRMFEKCAQAMESDCNIVIFPQGTRKRHEWVPFKDGAFSFAVDNNYTVVPVTLALPADLW 264          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A067CFC0_SAPPC (PlsC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CFC0_SAPPC)

HSP 1 Score: 153 bits (387), Expect = 8.500e-39
Identity = 94/269 (34.94%), Postives = 152/269 (56.51%), Query Frame = 2
Query:  464 LGVWVLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIG---LENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRT-KITVHEPIRPGDPAFKDVATLRKHCFDTVMGALP 1258
            LG+ VL++   ++F      +E K +   S   L K+  F L W+  S+L+ AL +P  +L   +      H    ++ + +      P  + G   L++L P   + +++V+NHQT +D+   Y++    +F+WV+KS +FL+PG G +MK+A YV L R N+DS+++MF  C ERLAA WSV++FPQGTR R   L FKDGAF++A  S   VVP T+ +P++L+   R+   K+ VH P+   + +    A ++   F  V   +P
Sbjct:    9 LGLVVLLTVLGIVF------EEKKLFAARS---LAKIALFGLLWVLCSILNFALVLPLKVLLAPQELQVVAHETCQVLARALHVAFFGPVTIEGEAHLQSLGP--HEAVLFVANHQTMMDVTTLYFL--PMRFAWVAKSVIFLMPGPGWMMKLANYVPLKRKNKDSIKQMFAACHERLAAQWSVIVFPQGTRNRTTFLPFKDGAFEIATTSKVRVVPLTIVIPDDLWTWNRRGACKLIVHAPL---ETSTLTKAEIKDAAFAAVASGVP 261          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A485LJH2_9STRA (Aste57867_21395 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJH2_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.760e-37
Identity = 93/262 (35.50%), Postives = 143/262 (54.58%), Query Frame = 2
Query:  476 VLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQ-RTKITVHEPIRPGDPAFKDVATLRKHCFDTVMGALP 1258
            V  + Y  +    +Y++E K +  A      K+L F L W+  S +                           + + +  +   P VV G E++ P+ E  M+ V+NHQT +DI   Y++  +  FSWVSKS++FL+PG G +MK+A YV LTR ++DSV KMF+  K+R   GWSV IFPQGTR+R + L FKDGAF LA+ +N  V+P T+ +P++L+   R  + K+ VH+P+  G       A L++   D +  ++P
Sbjct:    8 VSAAAYVAVAVAIIYMEEKKLFKDAVD---GKVLLFGLLWILVSAVEFXXXXXXXXXXXXXXXXXXXXXXXXXVARGLHVVFFGPVVVEGKEHMNPN-EVYMI-VANHQTMMDITALYHL--DGNFSWVSKSSIFLLPGAGWIMKLANYVPLTRKSKDSVLKMFEAAKDRFHNGWSVCIFPQGTRQRGEFLPFKDGAFDLAVTANVRVLPVTVIIPDDLWAWTRPGKVKLIVHKPLEKG----LTKAELKQQSHDVIAASMP 258          
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Match: A0A7R9U941_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U941_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.120e-32
Identity = 81/244 (33.20%), Postives = 136/244 (55.74%), Query Frame = 2
Query:  479 LVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGSLLSSA-LCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENLPPDGEKGM----VYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLMKIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFKDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDP 1195
            +V+   L  A  + LQE   +   +R+   K++AF LTW   SL+ +A L +  ++ GR        H     + +L+  +     V+ G E++P +  KG     +   NH + VD+ L   +  +  F+WV+KS+VF++PG+G L+ +AG V L RG + S  +M + C++ L  GWSV+I+PQGTR R K L +K GAF+L+I+    ++P ++ LP++ +     +  + VH PI P +P
Sbjct:   14 VVATILLSSAYVINLQEKPQFLRRNRL---KIMAFGLTWQCLSLIYAAVLLLTSVIRGREWLRVAASHSAAEGISKLLCTVFFGEVVLEGTEHIPKNSMKGQAQPAIVAPNHSSMVDVLLCAMLPGD--FTWVAKSSVFILPGIGQLLWMAGTVPLVRGKKSSALQMLEGCRKALDDGWSVLIYPQGTRNRRKWLPWKYGAFKLSIEKQVPIIPVSIVLPDDTWTNLECKLIVKVHPPIHPPEP 252          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15144.3879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNW3_9PHAE3.290e-21595.82PlsC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LS64_ECTSI2.400e-12986.901-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A835YS94_9STRA1.080e-6951.07PlsC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2UZR3_9STRA4.910e-4839.04Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A024U0I6_9STRA1.270e-4338.31PlsC domain-containing protein n=2 Tax=Aphanomyces... [more]
W4G7D7_9STRA6.690e-4340.73PlsC domain-containing protein n=5 Tax=Aphanomyces... [more]
A0A7S3Y3G5_HETAK2.760e-4239.01Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A067CFC0_SAPPC8.500e-3934.94PlsC domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A485LJH2_9STRA3.760e-3735.50Aste57867_21395 protein n=1 Tax=Aphanomyces stella... [more]
A0A7R9U941_9STRA2.120e-3233.20Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15144contigEcto-sp13_S_contig15144:1200..4115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score388.3
Seed ortholog evalue4e-105
Seed eggNOG ortholog2880.D8LS64
Model size1861
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655,ko:K13509
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975
KEGG ModuleM00089
Hectar predicted targeting categorysignal anchor
GOsGO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0019637,GO:0022414,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090407,GO:1901576
Exons3
EggNOG free text desc.1-acylglycerol-3-phosphate O-acyltransferase activity
EggNOG OGsCOG0204@1,KOG2848@2759
Ec32 ortholog description1-acyl-sn-glycerol-3-phosphate acyltransferase
Ec32 orthologEc-12_004670.1
EC2.3.1.51
Cds size1077
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462805.8467042-UTR-Ecto-sp13_S_contig15144:1199..15061681462805.8467042-UTR-Ecto-sp13_S_contig15144:1199..1506Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15144 1200..1506 +
1681462805.9060724-UTR-Ecto-sp13_S_contig15144:3638..41151681462805.9060724-UTR-Ecto-sp13_S_contig15144:3638..4115Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig15144 3639..4115 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462805.8667207-CDS-Ecto-sp13_S_contig15144:1506..22981681462805.8667207-CDS-Ecto-sp13_S_contig15144:1506..2298Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15144 1507..2298 +
1681462805.878068-CDS-Ecto-sp13_S_contig15144:2822..29691681462805.878068-CDS-Ecto-sp13_S_contig15144:2822..2969Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15144 2823..2969 +
1681462805.8933978-CDS-Ecto-sp13_S_contig15144:3500..36381681462805.8933978-CDS-Ecto-sp13_S_contig15144:3500..3638Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15144 3501..3638 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15144.3879.1prot_Ecto-sp13_S_contig15144.3879.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15144 1507..3638 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15144.3879.1

>prot_Ecto-sp13_S_contig15144.3879.1 ID=prot_Ecto-sp13_S_contig15144.3879.1|Name=mRNA_Ecto-sp13_S_contig15144.3879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=359bp
MPCCEHHADHDSHHDALGSVKTLASTAASTVMSLAADLAAQPSQWPRWAW
ICLGVWVLVSCYFLLFAVAMYLQELKSYGGASRVSLPKMLAFSLTWMNGS
LLSSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLENL
PPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLLM
KIAGYVALTRGNRDSVRKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDFK
DGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPIRPGDPAFKD
VATLRKHCFDTVMGALPYAEGMLEDQRKQKEAAAAAAAAAAAGEGTGSTP
VIESKKTK*
back to top

mRNA from alignment at Ecto-sp13_S_contig15144:1200..4115+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15144.3879.1 ID=mRNA_Ecto-sp13_S_contig15144.3879.1|Name=mRNA_Ecto-sp13_S_contig15144.3879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2916bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15144:1200..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)
GCTGGCGAAAGACCAACAACGTGCTCCTGTTTGTGGAAGGGGACAGAAAC GGGAGCCATCCCTCTGCTTGAGGCTGCTCCCGACGTTGGATAGCGGGGGG ACTGTCGCGGCCTGCGACCTCTACGCCGGCGCTTTCGCGTTTAGGCTCGC CCTGGGCAAAGCGCTCGTGAGAGTCGAGGAGGTTCGAGAAGGAGATCGAG AATTCTGAGTCGCGATACCACCACAACAGCACACAGCAGCGAGCTGACTT CTAGACGCGAGGGGAGCACCGCACCAGAACCCCGCCTCGTGCACGAAGAC AAACAGCATGCCTTGCTGCGAGCATCATGCGGATCACGACAGCCATCATG ATGCGTTGGGCTCCGTCAAGACCCTGGCGAGCACGGCGGCGTCAACCGTC ATGAGCCTGGCGGCAGACCTGGCCGCGCAACCCTCCCAGTGGCCGCGCTG GGCGTGGATCTGCCTGGGCGTGTGGGTCCTCGTCTCGTGCTACTTCCTCC TGTTCGCCGTGGCCATGTACCTCCAGGAGCTCAAGTCCTACGGCGGGGCG TCGAGGGTCAGTCTCCCCAAGATGCTCGCCTTCTCGCTCACCTGGATGAA CGGATCCCTCCTTTCCTCTGCGCTGTGCATCCCGGACCTGCTCCTCGGTA GGCGGGAGCGGGCCGCCGAGAAGGTCCACTACTACGGCAGCATTATGGGC CAGCTCATGTTCCGGATCCTGTCCAAGCCCCCGGTCGTGATTGGGCTGGA GAACCTGCCTCCGGACGGGGAGAAGGGCATGGTGTACGTGTCGAACCACC AGACGTCGGTTGACATCGCCCTCTTCTACTACATCGGAGCGGAGCGCAAG TTCTCGTGGGTGAGCAAGAGTACGGTGTTCCTCATCCCCGGGGTAGGGCT GCTCATGAAGATCGCGGGGTACGTTGCCCTGACCCGCGGCAACCGGGACA GCGTCAGGAAGATGTTCGACGACTGCAAGGAGCGACTCGCGGCCGGCTGG TCGGTCATGATCTTCCCCCAGGGCACCCGGAGGCGGCTGAAGGTGCTGGA CTTCAAGGACGGGGCGTTCCAGCTCGCCATCGACAGCAACAGCGTCGTGG TGAGGAATGGTCGATTGCGCACGCTGTGTGTGCATCCTGCGGTTTGGTTG TTGTTGTCTTGTTGCACATTACCCAGTGTTGTTTTTTACCACGCTTACTT CGAGCTGCCCGGAATCGAGCTAGCTTCCCATTTGATCATGATTTGTTGTT CCGGGGCGTCTTGAAGAGATGTAAGATGCCCCGTCAGTAAGTTGCAACAA TCTGCTTGTAACACGAACGATGTATGTTCCCTGCTGCATACCCATGTTGT TGCACCGCACGCTTGTCGAAGAACCACCGCGAACGCGTGTGGGAAACGCG CGGTGCTTTTAGATTGAAAACAACACAAAGACAAGACAGCAGCAGCCATA GCAGTCTACCACGTTTCTCTGCTTTCGTTGGAAGCTGGCAGAGTCTCTCC GCGTGCCCGTTCACTTGTGGTCTGTTGCTACCAACGGCGTGGCCCAACAC GCCAATATCGAAAGCACCCAAACCATGACGAAGTCTGTCTCGCGTTTACG TTTTTATCTTTTTTTTTATCTAGGTGCCCTTCACGCTTGATCTGCCGGAG AACTTGTTCCATGGCCCCAGGCAACGCACCAAGATCACCGTGCACGAGCC GATCCGCCCGGGGGACCCCGCGTTCAAGGACGTGGCGACGTTGCGCAAAC ACTGCTTCGACACCGTCATGGTGAGTCCTGGTAGAGGCCGTACGCCTCCT GCACTGTAAGCGCATCCGCCACTACAGTATCCACGCAACCAATGATAATG GTGAAGCATGGTGTGCTCGAATCGTGCTGAGGCACAGCTGTAGAAGCGAA AATCTGGGCGTTTCTTGGGCTTGATGCAAAGTGTGCCGCCACGTTCGTAG CTATCGCTGGCGGGTGGTCAAGTCCTCTCTGGGGTACTCAAGAGCAGGCT TTTACAAGAATGAGAACCTTAGCAGCCTTTCACAAGAATAGGAACCTTTG CAGAAGAAGGGCATCCCCTTTCGTCCGCGGGCTTGTGCTGTGTACCGCTA ATCACATTTACCTGCCCGTGCGCTCTGCTGGAGACGGGGGGGGAGTGGAT TCCCCCATCTTCTATTACAGCGGTCGTTGTGTGAGTGGTTAAGAGATGTT TGGTGCTTTGAAGATAGTTTTTTTTCTGCTTCTCACCCGATGTCTGTCCG AACCCTTCGCCGCTGCCACCGGTGCTATTGCTGCTATGCGTCGGTTCGAA GGGGGCGCTTCCGTACGCCGAGGGGATGCTCGAGGACCAAAGGAAGCAAA AGGAGGCGGCGGCCGCGGCGGCGGCGGCGGCGGCGGCAGGCGAAGGGACG GGCAGCACACCGGTCATCGAGAGCAAGAAGACCAAGTGAAGGGTTGACAG ACAAAATCCGACAAGAAATAGGGCCGCTTTTACTTCCTCATGCGCGCGGC GTTCGTGAGGGAGAACGATGATGGAGAGGCGGCCGTACCGCAGCGGCGGC AAATTTCGAAAGAAGAGGGTCAGTTTTCCTTCTCGCGCGCGAGGCGTTCG CTGAGAAGAGCGATGATGGACAGGCAGCAGCATTCGCTTTGGCCGGGAGA GACGAACGCTGCCAGGGAAAAGAACTCTGTAGAGAATGGTGTGTGGAGGA AGGGGCAGAGCGGGTGGGCGAAAAGAAACCGGCGGCGGCGGCGGCGGCTG AAAATATTGATGATGTCACCGCGCCCGCCCTCGGGGGAGTGGGGGGGGGG TGCTTGCGCGTCGCGGGGTTCTGTGGCGGAGGGTTGGCGCATCGCGGTCG GGAGAGCAGGACGAGAGCTCTCGGATAGGCCGGGATTGATTCTCATAAGG GTGAGGCCTTCTGGCG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15144:1200..4115+

>mRNA_Ecto-sp13_S_contig15144.3879.1 ID=mRNA_Ecto-sp13_S_contig15144.3879.1|Name=mRNA_Ecto-sp13_S_contig15144.3879.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1077bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15144:1200..4115+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTTGCTGCGAGCATCATGCGGATCACGACAGCCATCATGATGCGTT
GGGCTCCGTCAAGACCCTGGCGAGCACGGCGGCGTCAACCGTCATGAGCC
TGGCGGCAGACCTGGCCGCGCAACCCTCCCAGTGGCCGCGCTGGGCGTGG
ATCTGCCTGGGCGTGTGGGTCCTCGTCTCGTGCTACTTCCTCCTGTTCGC
CGTGGCCATGTACCTCCAGGAGCTCAAGTCCTACGGCGGGGCGTCGAGGG
TCAGTCTCCCCAAGATGCTCGCCTTCTCGCTCACCTGGATGAACGGATCC
CTCCTTTCCTCTGCGCTGTGCATCCCGGACCTGCTCCTCGGTAGGCGGGA
GCGGGCCGCCGAGAAGGTCCACTACTACGGCAGCATTATGGGCCAGCTCA
TGTTCCGGATCCTGTCCAAGCCCCCGGTCGTGATTGGGCTGGAGAACCTG
CCTCCGGACGGGGAGAAGGGCATGGTGTACGTGTCGAACCACCAGACGTC
GGTTGACATCGCCCTCTTCTACTACATCGGAGCGGAGCGCAAGTTCTCGT
GGGTGAGCAAGAGTACGGTGTTCCTCATCCCCGGGGTAGGGCTGCTCATG
AAGATCGCGGGGTACGTTGCCCTGACCCGCGGCAACCGGGACAGCGTCAG
GAAGATGTTCGACGACTGCAAGGAGCGACTCGCGGCCGGCTGGTCGGTCA
TGATCTTCCCCCAGGGCACCCGGAGGCGGCTGAAGGTGCTGGACTTCAAG
GACGGGGCGTTCCAGCTCGCCATCGACAGCAACAGCGTCGTGGTGCCCTT
CACGCTTGATCTGCCGGAGAACTTGTTCCATGGCCCCAGGCAACGCACCA
AGATCACCGTGCACGAGCCGATCCGCCCGGGGGACCCCGCGTTCAAGGAC
GTGGCGACGTTGCGCAAACACTGCTTCGACACCGTCATGGGGGCGCTTCC
GTACGCCGAGGGGATGCTCGAGGACCAAAGGAAGCAAAAGGAGGCGGCGG
CCGCGGCGGCGGCGGCGGCGGCGGCAGGCGAAGGGACGGGCAGCACACCG
GTCATCGAGAGCAAGAAGACCAAGTGA
back to top