prot_Ecto-sp13_S_contig15141.3878.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15141.3878.1
Unique Nameprot_Ecto-sp13_S_contig15141.3878.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length232
Homology
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: D7G8B2_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B2_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 5.780e-145
Identity = 224/231 (96.97%), Postives = 228/231 (98.70%), Query Frame = 0
Query:    1 GNLALLASFGVLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLAGDST 231
            GNLALLAS GVLT VITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPE+VEEKIVEPEKKEVKKAT++WAWGKKXXXXXXXXXXEKKEPEGVEYALR LPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKD+LLTINGNSLAGDST
Sbjct:    6 GNLALLASLGVLTTVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPENVEEKIVEPEKKEVKKATSIWAWGKKXXXXXXXXXXEKKEPEGVEYALRALPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDVLLTINGNSLAGDST 236          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: A0A6H5JRI8_9PHAE (Peptidase_M50 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRI8_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.030e-76
Identity = 122/140 (87.14%), Postives = 126/140 (90.00%), Query Frame = 0
Query:   14 MVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNR 153
            MVITLHEVGHLVAALSQGIKV+AFSVGLGPKLLSYRAADGKGGLL+GKLSGPFSS ESVEE  VEPEKKEVKKAT++WAW KK          EKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNR
Sbjct:    1 MVITLHEVGHLVAALSQGIKVDAFSVGLGPKLLSYRAADGKGGLLQGKLSGPFSSRESVEEIKVEPEKKEVKKATSIWAWSKKKEEPKEEVVVEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNR 140          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: D7FYE2_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE2_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 4.790e-56
Identity = 89/120 (74.17%), Postives = 102/120 (85.00%), Query Frame = 0
Query:  112 EGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLAGDST 231
            +G++Y LR +P+GGYVSFPN+Y VD++GV TE DDPDLL+NRGPFSRAIV AAGVVVN A+AWAC F  VTTG IVQ HYQPG+LV Q+TDPKGGAA+AGIQPKDILL INGN L   ST
Sbjct:   61 QGIKYVLRAIPIGGYVSFPNDYRVDKNGVATEFDDPDLLFNRGPFSRAIVFAAGVVVNLAVAWACAFWGVTTGRIVQAHYQPGVLVAQVTDPKGGAAVAGIQPKDILLAINGNRLPDSST 180          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: A0A7S2XWZ3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWZ3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.950e-40
Identity = 96/224 (42.86%), Postives = 127/224 (56.70%), Query Frame = 0
Query:   11 VLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEE--KIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNY----EVDEDGV--VTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSL 226
            VLT V+ +HE+GH +AA SQGIKVE FSVG GP+LL +                P   P+  +E    V+PEK+                             EGV Y+LR +P+GGYV+FP NY    E D+DG   + +LDDPDLL NR    RA+V AAGV+ N  LA+ACIF +V+T G+ QP Y+PG+ V Q+   +  AA+AGI+  D+LL+ING  L
Sbjct:   75 VLTFVVFIHELGHFLAARSQGIKVENFSVGFGPELLRW----------------PPKPPKQFDEAGNEVKPEKE-----------------------------EGVVYSLRAIPLGGYVAFPRNYKEGEEKDKDGFPEIIDLDDPDLLQNRPKRQRALVYAAGVIANVMLAYACIFSTVSTKGLQQPVYEPGVYVTQVNSAQTPAALAGIKEGDVLLSINGYRL 253          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: A0A4D9CUN5_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUN5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.780e-37
Identity = 80/224 (35.71%), Postives = 118/224 (52.68%), Query Frame = 0
Query:    6 LASFGVLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLAGD 229
            L S  VL +++ +HE+GH + A SQGIKV  FS+G GP+LLS++              GP                                            E + +EY LR +P+GG+VSFP +YEVD DG +   +D DLL NR P  +AIV++AGV+ N  L+++ + GSV T G+ +P +  G  V +L +    AA AGIQP+D++L +NG+ ++GD
Sbjct:   30 LTSLLVLAVIVAVHEMGHFIGARSQGIKVRNFSIGFGPRLLSFK-------------EGP--------------------------------------------EDDDIEYTLRAIPMGGFVSFPPHYEVDSDGEMIRYEDKDLLQNRPPLQQAIVISAGVIANILLSFSLLLGSVATTGLPRPQFSDGPYVMRLVEKDCPAARAGIQPEDLILAVNGHKVSGD 196          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: A0A836CJP0_9STRA (Peptidase family M50-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP0_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.700e-33
Identity = 79/194 (40.72%), Postives = 106/194 (54.64%), Query Frame = 0
Query:   34 VEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLA 227
            VE FS+G GPKLLSY+    KG   +G   G     ES                                    + E E VEYALR++PVGG+VSFP N+E  E+G + E D PDLL NR    RA+V++AG++ N  L WAC+F SV+  G+    Y PG++++ +TD  G AA AG+Q +D LL+ING +LA
Sbjct:  272 VENFSIGFGPKLLSYK----KG---RGLQLGGAEEEES------------------------------------RDEAENVEYALRLVPVGGFVSFPVNFEEGEEGEIVEDDHPDLLQNRPVGQRALVISAGIIANIVLTWACLFASVSASGVPHMSYSPGVVLSAVTDVAGPAARAGLQAQDTLLSINGRALA 422          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: L1IUZ3_GUITC (PDZ domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IUZ3_GUITC)

HSP 1 Score: 122 bits (307), Expect = 5.920e-29
Identity = 79/246 (32.11%), Postives = 111/246 (45.12%), Query Frame = 0
Query:    1 GNLALLASFGVLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPNNYEV-----------------DEDG---VVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSL 226
            G ++ L+   VL  V+  HE GH +AA  QGIK+  F +G GPK+  +                                                            K+ +GVEY+LR+LP+GGYVSFP    V                 +EDG   V  ++DDPDL+ NR    RA V++AGV+ N  LAW  IFGSVT+ G+  P    G++V+ L D KG  A  G++P DI++ I+G  +
Sbjct:   88 GGVSSLSGAAVLCGVVAFHEAGHFLAAKVQGIKINDFCIGFGPKVFGF------------------------------------------------------------KDRDGVEYSLRLLPLGGYVSFPEAQPVSSEMEGPGSRSDDEKAEEEDGRPAVKYDIDDPDLIQNRPALQRAFVISAGVLFNMLLAWGAIFGSVTSNGVAIPVLDRGVVVSSLVDGKGAGARYGMKPGDIIVEIDGKDI 273          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: M1VAX0_CYAM1 (Probable membrane-associated zinc metalloprotease n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAX0_CYAM1)

HSP 1 Score: 112 bits (279), Expect = 3.350e-25
Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 0
Query:  115 EYALRVLPVGGYVSFPNNYEVDEDG-VVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLA 227
            E+A+R+LP+GG+V+FP +Y  DE+   + + DDPDLL NR    RA+V+AAGV+ N ALAW  +F SV T G  +  ++ G+ V  LTD    AA AG++P D+++ +NG +LA
Sbjct:  116 EFAIRLLPLGGFVAFPEDYRYDEESKTIVKNDDPDLLQNRPLMQRALVIAAGVLANIALAWTLLFTSVETVGAPRMQFETGVSVPALTDMSAPAAKAGLKPGDVIVAVNGQALA 229          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: R7QMP1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMP1_CHOCR)

HSP 1 Score: 111 bits (277), Expect = 1.020e-24
Identity = 50/113 (44.25%), Postives = 77/113 (68.14%), Query Frame = 0
Query:  115 EYALRVLPVGGYVSFPNNYEVDED-GVVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSL 226
            E+ +R+LP+GGYV+FP +  +DE+ G     DDPDLL NR  F RA+V++AGV+ N  LAW CIF SV+T G+   ++ PG+ +  + D +G  A AG++  D++L ++GN +
Sbjct:  163 EFTVRLLPLGGYVAFPEHATIDEETGETVVSDDPDLLQNRPLFDRALVISAGVIANVILAWGCIFASVSTVGLPTYNFSPGVNIANIVDTQGTGAKAGVKAGDVILRVDGNEV 275          
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Match: A0A6T8ITU7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8ITU7_HEMAN)

HSP 1 Score: 110 bits (274), Expect = 2.570e-24
Identity = 74/245 (30.20%), Postives = 112/245 (45.71%), Query Frame = 0
Query:    6 LASFGVLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRAADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKXXXXXXXXXXEKKEPEGVEYALRVLPVGGYVSFPN------NYEVDEDG-------------VVTELDDPDLLYNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQLTDPKGGAAMAGIQPKDILLTINGNSLAGDST 231
            LA   VL  VI  HE+GH  AA  QGI V+ FS+G GPK+L ++                                                            + EG+ Y+LR+LP+GG+VSFP         E+DE+              V  +++DPDLL NR    RA V++AGV+ N  L++  I  +VT+GG+++P  +PG+ V  +  P+G  A  G++  DI++ +NG  L  D++
Sbjct:   99 LAGILVLGGVIAFHELGHFSAARIQGITVQDFSIGFGPKVLQFQ------------------------------------------------------------DKEGISYSLRLLPLGGFVSFPEAMSDEEKAEMDEEDRKDMAEAVEKGEYVDYDINDPDLLQNRPVAQRAFVLSAGVIFNMILSFGAILLTVTSGGVMEPILKPGVAVPAIVSPQGAGARYGLEAGDIVVAVNGEQLTEDAS 283          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15141.3878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8B2_ECTSI5.780e-14596.97PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRI8_9PHAE1.030e-7687.14Peptidase_M50 domain-containing protein n=1 Tax=Ec... [more]
D7FYE2_ECTSI4.790e-5674.17PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2XWZ3_9STRA2.950e-4042.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9CUN5_9STRA2.780e-3735.71PDZ domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A836CJP0_9STRA3.700e-3340.72Peptidase family M50-domain-containing protein n=1... [more]
L1IUZ3_GUITC5.920e-2932.11PDZ domain-containing protein n=1 Tax=Guillardia t... [more]
M1VAX0_CYAM13.350e-2546.49Probable membrane-associated zinc metalloprotease ... [more]
R7QMP1_CHOCR1.020e-2444.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T8ITU7_HEMAN2.570e-2430.20Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008915Peptidase M50PFAMPF02163Peptidase_M50coord: 11..50
e-value: 1.9E-10
score: 40.4
IPR008915Peptidase M50PFAMPF02163Peptidase_M50coord: 111..189
e-value: 3.2E-8
score: 33.2
NoneNo IPR availablePANTHERPTHR42837:SF1coord: 5..53
coord: 111..228
NoneNo IPR availablePANTHERPTHR42837FAMILY NOT NAMEDcoord: 5..53
NoneNo IPR availablePANTHERPTHR42837FAMILY NOT NAMEDcoord: 111..228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.588
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 150..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15141contigEcto-sp13_S_contig15141:707..4023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15141.3878.1mRNA_Ecto-sp13_S_contig15141.3878.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15141 707..4023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15141.3878.1 ID=prot_Ecto-sp13_S_contig15141.3878.1|Name=mRNA_Ecto-sp13_S_contig15141.3878.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=232bp
GNLALLASFGVLTMVITLHEVGHLVAALSQGIKVEAFSVGLGPKLLSYRA
ADGKGGLLKGKLSGPFSSPESVEEKIVEPEKKEVKKATNMWAWGKKKEEK
KEEVVVEKKEPEGVEYALRVLPVGGYVSFPNNYEVDEDGVVTELDDPDLL
YNRGPFSRAIVVAAGVVVNFALAWACIFGSVTTGGIVQPHYQPGLLVNQL
TDPKGGAAMAGIQPKDILLTINGNSLAGDST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008915Peptidase_M50
IPR036034PDZ_sf