mRNA_Ecto-sp13_S_contig15127.3869.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15127.3869.1
Unique NamemRNA_Ecto-sp13_S_contig15127.3869.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE)

HSP 1 Score: 704 bits (1816), Expect = 6.920e-232
Identity = 434/500 (86.80%), Postives = 444/500 (88.80%), Query Frame = 1
Query:    1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSR------NTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAT-----PXXXXXXXXXXXXXXXXXXSAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQPASTASGEGGC 1467
            YASELPGSHTVAIAAVDEAGN DPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPS SSG NPLS+SDN+DS++SATSGGE+GDDET +EIAPAPAADDDEAE  VDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPA  XXXXXXXXXXXXXXXXX           NTLLLTGLADGAHELS        TECDPQPLSHSWETDT LPVTTILSFPDKLMPS+FTFGSSKPLSRFMCKVDSG+WRQCDETS+FPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQ AETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVD     XXXXXXXXXXXXXXX        XXX  +      XXXXXXXXXXXXXX     APGQNYLSRSVVLCAEAWANCSTLAAN SYSYQQPASTASGEGGC
Sbjct:   27 YASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSPSSGVNPLSSSDNEDSIRSATSGGENGDDETVLEIAPAPAADDDEAEAEVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLLLTGLADGAHELS--------TECDPQPLSHSWETDTLLPVTTILSFPDKLMPSVFTFGSSKPLSRFMCKVDSGMWRQCDETSQFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQEAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDNDDKAXXXXXXXXXXXXXXXETRGGDGDXXXXGSGLATXXXXXXXXXXXXXXXXDGGGPAPGQNYLSRSVVLCAEAWANCSTLAANTSYSYQQPASTASGEGGC 518          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI)

HSP 1 Score: 605 bits (1560), Expect = 1.580e-194
Identity = 413/496 (83.27%), Postives = 416/496 (83.87%), Query Frame = 1
Query:    1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAV-EIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAP--SRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFATPXXXXXXXXXXXXXXXXXX----SAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQPASTASGEGGC 1467
            YASELPGSHTVAIAAVDEAGN DPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSG N LS                         E AP                         VWEVHEG ACVFFFSLDGGNYS       XXXXXXXXXXXXXXXXX     S NTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPS+FTFGSSKPLSRFMCKVDSGLWRQCDETS+FPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVP WSLSPTREGVD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXX    SAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQP  T+SGEGGC
Sbjct:  358 YASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGVNLLSXXXXXXXXXXXXXXXXXXXXXXXXXETAPXXXXXXXXXXXXXXXXXXXXXXXXGVWEVHEGXACVFFFSLDGGNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSVFTFGSSKPLSRFMCKVDSGLWRQCDETSQFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPPWSLSPTREGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQP--TSSGEGGC 851          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A0H4WQC5_9DELT (Internalin, putative n=2 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WQC5_9DELT)

HSP 1 Score: 95.5 bits (236), Expect = 6.430e-17
Identity = 101/319 (31.66%), Postives = 136/319 (42.63%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDD-------ETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFF-----------SLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPS---MFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
            GSHT+ + AVD AGN DP PAV+TW++D   P T+L+  P   TA   A FSF     ES AT   S    P +T     +     +G  DG         + A  I P PA+     +    E + T+    +   V    +  F F           SLDG  ++A   A P                           TGLADG H L+V A  A     D  P +++W  DT+ P T+I+S P  L  S    FTF +S+    + C +D   +  C     F  L+DG H++ V AVD  G  DP P T+ W V
Sbjct:  999 GSHTLQVRAVDAAGNVDPTPAVYTWTIDTIAPDTTLSGGPTGTTAATDATFSFTAN--ESPATFECSLDGAPFTTC----TAPVTYTGLADGSHTLRVRAVDAAGNIDPTPASRTWTVDTTAPETSFTS----TPAAVSNSASATFGFTSNESPVTYECSLDGATFAAC--ATPQT------------------------FTGLADGEHTLAVRARDAVGN-VDASPATYTWTIDTTAPNTSIVSGPPALTNSDGATFTFSASESGVTYECSLDGATYAACTNPVTFTGLADGSHTLTVRAVDAAGNVDPTPATHTWTV 1280          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A4Y6CFA7_MYXXA (Cell envelope biogenesis protein OmpA n=19 Tax=Proteobacteria TaxID=1224 RepID=A0A4Y6CFA7_MYXXA)

HSP 1 Score: 91.7 bits (226), Expect = 1.090e-15
Identity = 97/350 (27.71%), Postives = 137/350 (39.14%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDDGS---------VWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAP---SRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLM---PSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDG 1005
            G HT+A+ AVD AGN DP PA  TW+VDA  P T++ S P AVT   +A F F             SS E+P++                    + +++ AP     D ++  A+ E   T    AVD             W V          S   G  +    +A                   AP     +   LTGLADG H L+V A  A   E DP P + +W  D + P TTI+S P  +     + F F S++    + C ++   +  C +   +  L +G H++ V AVD  G  DP P  Y W V +    +          + A T   L G    G
Sbjct:  686 GEHTLAVRAVDAAGNEDPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDF-------------SSNESPVTY-------------------QCSLDGAPFATCTDPQSYTALPEGEHTLAVRAVDAAGNMDPTPATYAWTVDTTAPDTTIVSGPSG--TTTSSSATFDFSSNESPVTYQCSLDGAPFTACSDPQTLTGLADGEHTLAVRAVDAAGNE-DPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDFSSNESPVTYQCSLNGAPFAACSDPQSYTALPEGEHTLAVRAVDAAGNVDPTPAQYAWTVDLTSPALPTIDSPADQEEVATTTPTLTGTGEPG 1000          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A848LS83_9DELT (OmpA family protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LS83_9DELT)

HSP 1 Score: 91.7 bits (226), Expect = 1.110e-15
Identity = 95/315 (30.16%), Postives = 134/315 (42.54%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDD-GSV--------WEVHEGGACVFFFSLDGG-NYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
            GSHT+ + AVD AGN DP PA +TW+VD   P TS+ S P   T+  +A F F              S E+P++                    + +++ A   A  D +    + + N T    AVD  G+V        W V        F S     + SAV                           +    +GLADG+H L+V A  A +   DP P +++W  DT++P TTI+S P  L  S    F F S++    + C +D   +  C +   F  L+DG HS+ V AVD  G  DP+P TY W V
Sbjct:  751 GSHTLEVRAVDAAGNVDPTPATYTWTVDTVAPDTSIVSGPTGTTSSTSATFDF-------------DSPESPVTY-------------------QCSLDGAAFTACTDPQTFTGLAQGNHTLAVRAVDAAGNVDPTPATRTWTVDTTAPDTSFTSTPPTRSSSAVATFDFNSNESPVTYECSLNGATFVACSDPSTFSGLADGSHTLAVRARDA-AGNVDPTPATYTWTVDTAVPDTTIVSGPPALSNSASATFDFSSNESPVTYQCSLDGAAFTACADPRTFTGLTDGNHSLAVRAVDAAGNVDPSPATYAWTV 1032          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8)

HSP 1 Score: 91.7 bits (226), Expect = 1.130e-15
Identity = 84/301 (27.91%), Postives = 116/301 (38.54%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDARPR-TSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
            G+HT+A+ AVD AGN DP PA   W+VD  P  T + S P AVT+  TA F F             SS ++P++                                                                +  SLD G Y+A                            + +  TGLA G H LSV A  A +   DP P +++W  DT+ P TTI+S P  +  S    F F S++    + C +DSG +  C +   F  L+ G H++ V AVD  G  DP P TY+W +
Sbjct:  701 GNHTLAVRAVDAAGNVDPTPATHAWTVDTSPPDTVIVSGPAAVTSATTATFDF-------------SSPDSPVT----------------------------------------------------------------YECSLDSGAYAACT--------------------------DPVTFTGLAQGNHTLSVRARDA-AGNVDPTPATYAWRVDTTAPDTTIVSGPASVTNSTSATFDFSSNESPVTYQCSLDSGAFVACTDPQTFTGLAQGNHTLAVRAVDAAGNVDPTPATYSWTI 897          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: F8CLT6_MYXFH (OmpA domain-containing protein n=3 Tax=Myxococcaceae TaxID=31 RepID=F8CLT6_MYXFH)

HSP 1 Score: 89.7 bits (221), Expect = 4.470e-15
Identity = 97/354 (27.40%), Postives = 136/354 (38.42%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDD-GSV--------WEVHEGGACVFFFS-------LDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLM---PSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDG 1005
            G HT+A+ AVD AGN DP PA + W+VDA  P T++ S P AVT   TA F F             SS E+P++                    E +++ AP  A  D +    + + N T    AVD  G++        W V          S         G  +      +P                   P       TGL DG H L+VYA  A +   DP P   +W  D + P TTI+S P  +     + F F S++    + C ++   +  C +   F  L +G  ++ V AVD  G  DP P TY W V +    +          + A T   L G    G
Sbjct:  686 GDHTLAVRAVDAAGNADPSPATYAWTVDATAPDTTIVSGPAAVTNATTATFDF-------------SSNESPVTY-------------------ECSLDGAPFVACTDPQGFTGLSQGNHTLSVRAVDGVGNMDPTPATYAWTVDTAPPDTAIVSGPSGTTTSRGATFDFASDESPVTYQCSLDGGPFVPCTDPQP------YTGLGDGEHTLAVYAVDA-AGNVDPTPAVRTWTVDATAPETTIVSGPPAVTNATTATFDFSSNESPVTYECSLNGAPFTACTDPQPFTALPEGEQTLAVRAVDAVGNVDPTPATYAWTVDLTPPTLPTIDSPADQEEVATTTPTLTGTGEPG 1000          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F1BC852 (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F1BC852)

HSP 1 Score: 88.2 bits (217), Expect = 1.400e-14
Identity = 96/325 (29.54%), Postives = 132/325 (40.62%), Query Frame = 1
Query:    1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFA---------CALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEF 933
            Y S   G HT+A+ AVD AGN DP PA +TW+VD   P T++ S P   TA   A F FA         CAL +  A  S ++  N    S    ++Q           +TA  I P PA         VD    TA  D S+     G       +     ++A E  A                       +    T L+ G H LSV A +  +   DP P + SW  DT+ P TTI++ P     S    FTF +++  + + C +D   +  C   + F  LS G H++ V A D  G  DP P T  W +  +     F
Sbjct:  669 YTSLSQGPHTLAVRAVDTAGNVDPTPATYTWTVDTVAPDTTIVSGPSGTTASANASFGFASNEAGVTYQCAL-DGAAFASCANPANLTGLSQGGHTLQVRAV-------DTAGNIDPTPAT----RSWTVD----TAAPDTSIVSGPSGTTASTSATF---TFNATETPATYECSLDNAAF--------VACTSPATFTDLSQGNHTLSVRA-RDTAGNIDPTPATRSWTVDTAAPDTTIVTGPSGTTASTSATFTFNATETPATYECSLDGAAFTACTSPATFTNLSQGNHTLSVQARDAVGNVDPTPATRTWTLDTVAPETTF 965          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F082607 (OmpA family protein n=1 Tax=Myxococcus vastator TaxID=2709664 RepID=UPI001F082607)

HSP 1 Score: 87.0 bits (214), Expect = 2.980e-14
Identity = 104/361 (28.81%), Postives = 142/361 (39.34%), Query Frame = 1
Query:   22 SHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWE----VHEGGACVFFFS-----------LDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSML--ETVVEFCPP-SHLPFQA-----AETQQVLLGASYDGVACAP 1020
            +HT+A+ AVD AGN DP PA + W+VD   P T++ SAP A T   +A F F     ES  T   S    P+    N  +      G       T V  A   A + D          +    D ++      V    +  F FS           LDGG +                           P  +    TGLA+G H L V A    +   DP P +++W  DT+ P TTI+S P     S    F F S +    + C +D G +  C +   F  L+DG H++ V AVD  G  DP P T  W V     +T++   PP +  P  A     ++   V    S DG A  P
Sbjct:  303 NHTLAVRAVDSAGNVDPTPAEYEWTVDTTAPDTAIVSAPPATTTSSSATFDFDSN--ESPVTYQCSLDGAPVVPCTNPVTFTGLADGSH-----TLVVFAVDEAGNADVTPATYTWTVDATAPDTTIVSGPPAVTNSTSATFDFSSNESSVTYECSLDGGPF--------------------------VPCTDPQTFTGLAEGNHTLEVRAVDV-AGNVDPTPATYAWTVDTTAPDTTIVSGPSGATTSSSATFDFSSDESPVTYQCSLDGGPFVACTDPVTFTGLADGAHTLAVRAVDGAGNVDPTPATRTWTVDTTAPDTLIVTGPPLTDAPSAATFDFDSDESPVTYECSLDGAAYVP 629          
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A0G2ZEH0_9DELT (Ig-like protein group 3 n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZEH0_9DELT)

HSP 1 Score: 84.7 bits (208), Expect = 1.530e-13
Identity = 90/318 (28.30%), Postives = 139/318 (43.71%), Query Frame = 1
Query:   19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDARPR-TSLTSAPQAVTAVDTAFFSFA--------CALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAA-----DDDEAEVAVDEN--NETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDK---LMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSM 912
            G+H + ++AVD AGN DP PAV+TW+VD  P  T++ S P ++T V +A F F+        C+L +  A  + +  E     ++   ++Q           + A  + P PA+     D    E  +  N  N +   D +     E GA  F  SLDG  ++                          P    +  TGL DG+H   V A  A +   DP P S++W  D ++P T I+S P        + F F S +P   F C +D   +  C +   F  L +  H+++V A D +G  DP+P  Y+W V +
Sbjct:  857 GAHRLEVSAVDAAGNMDPTPAVYTWTVDLTPPDTTIVSGPPSLTNVTSATFDFSSEAGATFECSL-DGAAFTACADPETFTGLTEKAYTLQVRAR-------DAAGNVDPTPASYTWTVDFSAPETTLVSNPPNPSNSPDATFDFSSEAGA-TFECSLDGAPFT--------------------------PCTGPVSFTGLGDGSHTFQVRAVDA-AGNVDPTPASYTWTVDAAVPETLIVSGPPSRTNATSATFDFMSPEPGVTFECSLDGAAFSACADPETFTGLDERTHTLLVRARDASGNVDPSPAIYSWTVDL 1138          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K857_9PHAE6.920e-23286.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBK9_ECTSI1.580e-19483.27OmpA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A0H4WQC5_9DELT6.430e-1731.66Internalin, putative n=2 Tax=Myxococcus hansupus T... [more]
A0A4Y6CFA7_MYXXA1.090e-1527.71Cell envelope biogenesis protein OmpA n=19 Tax=Pro... [more]
A0A848LS83_9DELT1.110e-1530.16OmpA family protein n=1 Tax=Pyxidicoccus fallax Ta... [more]
UPI001F50C2B81.130e-1527.91Ig-like domain-containing protein n=2 Tax=Pyxidico... [more]
F8CLT6_MYXFH4.470e-1527.40OmpA domain-containing protein n=3 Tax=Myxococcace... [more]
UPI001F1BC8521.400e-1429.54Ig-like domain-containing protein n=1 Tax=Myxococc... [more]
UPI001F0826072.980e-1428.81OmpA family protein n=1 Tax=Myxococcus vastator Ta... [more]
A0A0G2ZEH0_9DELT1.530e-1328.30Ig-like protein group 3 n=1 Tax=Archangium gephyra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15127contigEcto-sp13_S_contig15127:3..4249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score613.6
Seed ortholog evalue7.9e-173
Seed eggNOG ortholog2880.D8LBK9
Model size1468
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.cytoskeletal protein binding
EggNOG OGsKOG0613@1,KOG0613@2759
Cds size1467
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462805.2323174-CDS-Ecto-sp13_S_contig15127:2..1401681462805.2323174-CDS-Ecto-sp13_S_contig15127:2..140Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15127 3..140 +
1681462805.2512994-CDS-Ecto-sp13_S_contig15127:1209..16671681462805.2512994-CDS-Ecto-sp13_S_contig15127:1209..1667Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15127 1210..1667 +
1681462805.271706-CDS-Ecto-sp13_S_contig15127:2436..25631681462805.271706-CDS-Ecto-sp13_S_contig15127:2436..2563Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15127 2437..2563 +
1681462805.2804813-CDS-Ecto-sp13_S_contig15127:3102..32821681462805.2804813-CDS-Ecto-sp13_S_contig15127:3102..3282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15127 3103..3282 +
1681462805.2884822-CDS-Ecto-sp13_S_contig15127:3685..42491681462805.2884822-CDS-Ecto-sp13_S_contig15127:3685..4249Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15127 3686..4249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15127.3869.1prot_Ecto-sp13_S_contig15127.3869.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15127 3..4249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15127.3869.1

>prot_Ecto-sp13_S_contig15127.3869.1 ID=prot_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=489bp
YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTA
VDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDE
TAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDG
GNYSAVEPAAPAAAAGETSSMSSSSSSSEAPSRNTLLLTGLADGAHELSV
YACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSMFTFGSSKPL
SRFMCKVDSGLWRQCDETSKFPLSDGLHSVVVMAVDPTGRSDPNPITYNW
EVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVL
QWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDDDDEAGGGSG
SSSSGGESGGGDGDDGGGGSGFATPGPTGGGTNGGGGGGDGGGSAPGQNY
LSRSVVLCAEAWANCSTLAANASYSYQQPASTASGEGGC
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mRNA from alignment at Ecto-sp13_S_contig15127:3..4249+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15127.3869.1 ID=mRNA_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4247bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15127:3..4249+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACGCCTCCGAGCTGCCTGGATCGCACACGGTGGCGATCGCGGCGGTAGA CGAGGCCGGCAACACCGACCCCGAGCCGGCGGTGTGGACGTGGTCCGTCG ACGCGCGGCCAAGGACGTCCCTCACGAGCGCCCCACAGGTAGTCCAGACA GACAGATTGATCGTGCTTCTGCACTTCACTTGGGGCAGCTTCCAAGGATG TGAATCATGTTTTTATCGTTTTGAAGGGGCTTGGCGACCGGAGGGGGGGG GGGGCTTCCTTGGGCTTGGGATTGTTGTTTTTGACGATTTTTGTTTTTTA GAAAGTATTCATTACCTCACAGAAAAGAATACCCGTTCGAAATGTAACCT TGGTCATTACCTCACAGAATGACTACCCGTTCCAGATGTAATAACAGTCG AAAGGGATGTGCTTGGAGTCTTTTCAGTGAGTGGAGGAAAATCGGCAGGG AATTGGGCTTGTTTTGAGCGTGTTTAACCCTACATACATTGATTTGTACC AGCTGGTGCTTTGCTTTTTGACCTTCGAAGTTGGGTGTGTAGTAAGCTGA TGGGTCGTTTGTGAGACCAGGTTCTCGTGGTCACATCGCTTTTGAGTTGA CGCGGTGTGTACTGTAGGCTATTGTAGTACTACCGAAGGGTGACCAAGGA ATACAAGTTTTTTGGTGTAGGATTAGGGTGCTAGGGTTGAGAGGTTGAAG GCTCAGGCGAAGAGGATCATAGCATCATTCCCGAACGAGTGACAATACAA CCAAGGGAGGGGCAAACGTTATCGCGGACCACCACTGTAGTAGCGACGGT CAGGCCTCCAAGCAATTGACATCGAATGTATGTATCGCGCGGGAAGTACA CAGGATGACGGCTCTCCTCCGAAGCTTTGCCACTATCGTACTTGAGTCAT GCGTGCGTGGCTTCTTCCCGTATCGCTTACTCTCGGTACCCCTGGATTTT CGAGGTTTCGTGTTTTGCACTCATCCCCCCCCTCCCGCGGGCCATATCCC ATTCTCTCCTTGAAGCAACACATACGCTCTCCGGCCTACAGCAGCAGTAT GGTCTCTCCTGGCCTACAACGATGTGAAGCCAAGTCGTACAGCAGCAGTA TTGTAGTACTGAAGTAGTGCTTGGTATTTTTTTACCCGTGTTTTGCTGTC TGCCACACTCACCTACGCCGCGCCCACACGCTGCTCACCCCCCGCCACCT CTACCAGGCGGTGACGGCCGTGGACACGGCTTTTTTCTCGTTCGCGTGCG CGCTCCCGGAGTCGGAGGCGACGCCTTCCGCCTCCTCGGGGGAAAACCCC CTCTCGACCAGCGACAACGACGATAGCGTCCAAAGCGCTACTAGCGGCGG CGAGGACGGCGACGATGAAACCGCCGTTGAGATAGCGCCCGCACCAGCAG CCGATGACGACGAAGCAGAGGTAGCGGTGGACGAAAACAACGAGACGGCG GTCGACGACGGGAGCGTGTGGGAGGTCCACGAGGGCGGGGCGTGCGTCTT CTTCTTCTCGCTGGACGGCGGCAACTACTCGGCGGTGGAGCCGGCGGCGC CGGCGGCGGCGGCGGGGGAAACCTCGTCCATGTCGTCGTCGTCGTCGTCG TCGGAGGCGCCGAGCAGGAACACGCTGTTGTTGACGGGGCTAGCCGACGG GGCGCACGAGCTAAGGTGAGGCGTGGGCGAGCGGTGCGTGCCACGCGGTG GCTACCATCCATTACGTCCTGTACGTGTAGGTTGGTTATATCCAGGAGAC GGGACGCTTGACGACTAGGGCGCGCGGCGTACGCGCTCTGCGTGCTGTGA CGTAGGTTAAGGGAGATTAGAGAAGATTGTCGGCACCCCACGCACAAGTT TAACGATAGTTCCGACACAACCACCGGGTGGTGGTATTTTTTTATGGCTC CTTGAGACGCGTCCAAGCCAACGAAGCGCGCTCTTCAGGCGAAGCAAAGT ATTCGTACGGACGGCGATGACGCAGGATACCACCCCTCCACACACACACA CACACACGAGTGCCGCACCGCCGTGTCATGTTTTTTTTGTAGCGCTCGTC ATGACGTGCAACATGAAAACCAACACTAACATGCGCCTTCAGCGTGCGGT GCTCGGCGTGTGACGTGTAGATGAGCATCCAACATGTGTTGTGCCACGTC CTGGTTCTACGTACATCCAACAGTCCAAATCTATTTTTTGCTCGCTGCTT GTGTTTTTCTACGTTAGGCCGTCCGCGTGGGACAGACACAGCGGGCAGAA AACCCCCTGCTTTCTTGCAGCTCCCAGACCTGCTCTTGCCTTAGGCGACC GTTTTTTTGTGCTGTTCAAGCAAGAGCACAGCCTGCGTCGTTGTCAAGTC GGACGTACCCGTTTTGAACCGTAGGCATTTACGCTTGCTTTTCGCTGCTT GGCTTCACGTGCCAAATCGTTTTGGTGTCCTCAGCGTGTACGCGTGCAAG GCGAACAGCACCGAGTGCGACCCTCAACCGCTAAGCCATTCCTGGGAGAC CGACACGTCGCTGCCGGTGACGACCATCCTCTCCTTCCCCGACAAGCTCA TGCCGTCCATGGTTAGTTGCCGTTGTCGTTGGTGCTATGTTGCGGTTGCT GTTGTCGTGGGTGTTGTTTGCCATGTTGCTTTCAGTGTGTTCGTTTCACT ACATGCGTCAACCGTCGGTCGCAATTTCTACAAATACAACGAGCCTCTCT GTAACTGGAGTGCTCCCATTCGGGGGTCACACGGGCAGGAATCCCTCCTT TGCGGTGTGTGCCTCCCTCACGTGTTTTCGTTGGGGAAGGGTTCAGCGGT CCTTCCTTCACGCAAACTCACCATCAAGCGTATTCCAGTATACATGGAAA CGCGGAAAAAACACACGCCTCGCCGGGATTGTAACTCTCAAACCTAGCCG CCACGTAGGTTTCGAAGTGGCCACCCGGATTGCCGGCGGAGCGAGCAGCG ATCGCTGCTGTTGTCGCCGGGGTTGTGCCTTTCTCTCATCGTTGATGATG TCATCGTCGTCGTCGTGTGTCTCTTATCGCACCCCGGTTTTCGTGCCTGC TTTGCGCTTGTCATCGTTGTCGACGTGTGACGCTCGTGGCGTCCCCGCAG TTCACTTTCGGGTCGAGCAAGCCCCTGTCTCGGTTCATGTGCAAGGTGGA CAGCGGCCTGTGGCGCCAGTGCGACGAGACCTCCAAATTTCCCCTCAGTG ACGGCCTCCACAGCGTCGTCGTCATGGCCGTCGATCCCACCGGCCGCTCG GACCCGAACCCCATCACCTACAACTGGGAGGTGAACAACAGGGGGGGGCT CCGTGGCCGATAACACCTGTGTACCTGTATGTAGTTTTTTCATTGAGCAC GTCGTATTTTTCCGCGGCTGCTCTCTGTCCTTCATTCATGGCGCGTTCGT GCCCGTATATGGAACTAGTTTACGAGACCACTGCTGAGCCAGGGGCATCT TAGGGGTTCTCGAGAGTGGTTGTTCTCAAGAGTCGACAAGCGTGTATTGG TGTGACCCGCTTCGAGCCTGTTTTATGCACAATTGCGCCGGTTTTCGGCG GGTTGTTGCTGTACTCCACGAGGACCCCGAGCAGCGACAAGAATAACGGC TCTGCACCTCATGCTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGC TGCTCCTCCTGGTACACGACACGCGATGCGCAGGTGAGCATGCTGGAAAC GGTCGTGGAATTCTGCCCGCCGAGCCACCTGCCGTTCCAGGCGGCGGAGA CGCAGCAGGTCCTCCTGGGCGCGTCGTACGACGGGGTGGCCTGCGCGCCG GCCATGTCCTGCCAGATCCGCTACGTCCTCCAGTGGGAGGCCCCCGTGCC GGCGTCCTCGGCTGCGGACTGCGTCGCCCCCCCGTCCCCGGCCCCGACCG CTGCCCCGGTGCCCACGTGGTCCTTGTCGCCGACACGGGAGGGCGTGGAT GATGACGACGAGGCCGGCGGCGGGAGTGGTTCATCGAGTAGCGGGGGGGA GAGCGGTGGTGGCGATGGTGATGATGGTGGCGGCGGGAGCGGTTTCGCGA CCCCGGGCCCGACCGGGGGGGGTACCAACGGCGGCGGCGGGGGCGGTGAT GGCGGCGGGTCCGCCCCCGGTCAGAACTACCTCTCCCGATCGGTGGTGCT GTGCGCGGAGGCTTGGGCTAACTGCTCGACGTTGGCGGCGAACGCTAGCT ACAGCTACCAGCAGCCGGCTTCCACGGCTTCCGGCGAGGGCGGGTGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15127:3..4249+

>mRNA_Ecto-sp13_S_contig15127.3869.1 ID=mRNA_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15127:3..4249+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACGCCTCCGAGCTGCCTGGATCGCACACGGTGGCGATCGCGGCGGTAGA
CGAGGCCGGCAACACCGACCCCGAGCCGGCGGTGTGGACGTGGTCCGTCG
ACGCGCGGCCAAGGACGTCCCTCACGAGCGCCCCACAGGCGGTGACGGCC
GTGGACACGGCTTTTTTCTCGTTCGCGTGCGCGCTCCCGGAGTCGGAGGC
GACGCCTTCCGCCTCCTCGGGGGAAAACCCCCTCTCGACCAGCGACAACG
ACGATAGCGTCCAAAGCGCTACTAGCGGCGGCGAGGACGGCGACGATGAA
ACCGCCGTTGAGATAGCGCCCGCACCAGCAGCCGATGACGACGAAGCAGA
GGTAGCGGTGGACGAAAACAACGAGACGGCGGTCGACGACGGGAGCGTGT
GGGAGGTCCACGAGGGCGGGGCGTGCGTCTTCTTCTTCTCGCTGGACGGC
GGCAACTACTCGGCGGTGGAGCCGGCGGCGCCGGCGGCGGCGGCGGGGGA
AACCTCGTCCATGTCGTCGTCGTCGTCGTCGTCGGAGGCGCCGAGCAGGA
ACACGCTGTTGTTGACGGGGCTAGCCGACGGGGCGCACGAGCTAAGCGTG
TACGCGTGCAAGGCGAACAGCACCGAGTGCGACCCTCAACCGCTAAGCCA
TTCCTGGGAGACCGACACGTCGCTGCCGGTGACGACCATCCTCTCCTTCC
CCGACAAGCTCATGCCGTCCATGTTCACTTTCGGGTCGAGCAAGCCCCTG
TCTCGGTTCATGTGCAAGGTGGACAGCGGCCTGTGGCGCCAGTGCGACGA
GACCTCCAAATTTCCCCTCAGTGACGGCCTCCACAGCGTCGTCGTCATGG
CCGTCGATCCCACCGGCCGCTCGGACCCGAACCCCATCACCTACAACTGG
GAGGTGAGCATGCTGGAAACGGTCGTGGAATTCTGCCCGCCGAGCCACCT
GCCGTTCCAGGCGGCGGAGACGCAGCAGGTCCTCCTGGGCGCGTCGTACG
ACGGGGTGGCCTGCGCGCCGGCCATGTCCTGCCAGATCCGCTACGTCCTC
CAGTGGGAGGCCCCCGTGCCGGCGTCCTCGGCTGCGGACTGCGTCGCCCC
CCCGTCCCCGGCCCCGACCGCTGCCCCGGTGCCCACGTGGTCCTTGTCGC
CGACACGGGAGGGCGTGGATGATGACGACGAGGCCGGCGGCGGGAGTGGT
TCATCGAGTAGCGGGGGGGAGAGCGGTGGTGGCGATGGTGATGATGGTGG
CGGCGGGAGCGGTTTCGCGACCCCGGGCCCGACCGGGGGGGGTACCAACG
GCGGCGGCGGGGGCGGTGATGGCGGCGGGTCCGCCCCCGGTCAGAACTAC
CTCTCCCGATCGGTGGTGCTGTGCGCGGAGGCTTGGGCTAACTGCTCGAC
GTTGGCGGCGAACGCTAGCTACAGCTACCAGCAGCCGGCTTCCACGGCTT
CCGGCGAGGGCGGGTGC
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