mRNA_Ecto-sp13_S_contig15127.3869.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A6H5K857_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K857_9PHAE) HSP 1 Score: 704 bits (1816), Expect = 6.920e-232 Identity = 434/500 (86.80%), Postives = 444/500 (88.80%), Query Frame = 1
Query: 1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSR------NTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAT-----PXXXXXXXXXXXXXXXXXXSAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQPASTASGEGGC 1467
YASELPGSHTVAIAAVDEAGN DPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPS SSG NPLS+SDN+DS++SATSGGE+GDDET +EIAPAPAADDDEAE VDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPA XXXXXXXXXXXXXXXXX NTLLLTGLADGAHELS TECDPQPLSHSWETDT LPVTTILSFPDKLMPS+FTFGSSKPLSRFMCKVDSG+WRQCDETS+FPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQ AETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVD XXXXXXXXXXXXXXX XXX + XXXXXXXXXXXXXX APGQNYLSRSVVLCAEAWANCSTLAAN SYSYQQPASTASGEGGC
Sbjct: 27 YASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSPSSGVNPLSSSDNEDSIRSATSGGENGDDETVLEIAPAPAADDDEAEAEVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTLLLTGLADGAHELS--------TECDPQPLSHSWETDTLLPVTTILSFPDKLMPSVFTFGSSKPLSRFMCKVDSGMWRQCDETSQFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQEAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDNDDKAXXXXXXXXXXXXXXXETRGGDGDXXXXGSGLATXXXXXXXXXXXXXXXXDGGGPAPGQNYLSRSVVLCAEAWANCSTLAANTSYSYQQPASTASGEGGC 518
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: D8LBK9_ECTSI (OmpA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK9_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 1.580e-194 Identity = 413/496 (83.27%), Postives = 416/496 (83.87%), Query Frame = 1
Query: 1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAV-EIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAP--SRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPTWSLSPTREGVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFATPXXXXXXXXXXXXXXXXXX----SAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQPASTASGEGGC 1467
YASELPGSHTVAIAAVDEAGN DPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSG N LS E AP VWEVHEG ACVFFFSLDGGNYS XXXXXXXXXXXXXXXXX S NTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPS+FTFGSSKPLSRFMCKVDSGLWRQCDETS+FPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVP WSLSPTREGVD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX SAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQP T+SGEGGC
Sbjct: 358 YASELPGSHTVAIAAVDEAGNVDPEPAVWTWSVDARPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGVNLLSXXXXXXXXXXXXXXXXXXXXXXXXXETAPXXXXXXXXXXXXXXXXXXXXXXXXGVWEVHEGXACVFFFSLDGGNYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSVFTFGSSKPLSRFMCKVDSGLWRQCDETSQFPLSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDGVACAPAMSCQIRYVLQWEAPVPASSAADCVAPPSPAPTAAPVPPWSLSPTREGVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPGQNYLSRSVVLCAEAWANCSTLAANASYSYQQP--TSSGEGGC 851
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A0H4WQC5_9DELT (Internalin, putative n=2 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4WQC5_9DELT) HSP 1 Score: 95.5 bits (236), Expect = 6.430e-17 Identity = 101/319 (31.66%), Postives = 136/319 (42.63%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDD-------ETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFF-----------SLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPS---MFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
GSHT+ + AVD AGN DP PAV+TW++D P T+L+ P TA A FSF ES AT S P +T + +G DG + A I P PA+ + E + T+ + V + F F SLDG ++A A P TGLADG H L+V A A D P +++W DT+ P T+I+S P L S FTF +S+ + C +D + C F L+DG H++ V AVD G DP P T+ W V
Sbjct: 999 GSHTLQVRAVDAAGNVDPTPAVYTWTIDTIAPDTTLSGGPTGTTAATDATFSFTAN--ESPATFECSLDGAPFTTC----TAPVTYTGLADGSHTLRVRAVDAAGNIDPTPASRTWTVDTTAPETSFTS----TPAAVSNSASATFGFTSNESPVTYECSLDGATFAAC--ATPQT------------------------FTGLADGEHTLAVRARDAVGN-VDASPATYTWTIDTTAPNTSIVSGPPALTNSDGATFTFSASESGVTYECSLDGATYAACTNPVTFTGLADGSHTLTVRAVDAAGNVDPTPATHTWTV 1280
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A4Y6CFA7_MYXXA (Cell envelope biogenesis protein OmpA n=19 Tax=Proteobacteria TaxID=1224 RepID=A0A4Y6CFA7_MYXXA) HSP 1 Score: 91.7 bits (226), Expect = 1.090e-15 Identity = 97/350 (27.71%), Postives = 137/350 (39.14%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDDGS---------VWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAP---SRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLM---PSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDG 1005
G HT+A+ AVD AGN DP PA TW+VDA P T++ S P AVT +A F F SS E+P++ + +++ AP D ++ A+ E T AVD W V S G + +A AP + LTGLADG H L+V A A E DP P + +W D + P TTI+S P + + F F S++ + C ++ + C + + L +G H++ V AVD G DP P Y W V + + + A T L G G
Sbjct: 686 GEHTLAVRAVDAAGNEDPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDF-------------SSNESPVTY-------------------QCSLDGAPFATCTDPQSYTALPEGEHTLAVRAVDAAGNMDPTPATYAWTVDTTAPDTTIVSGPSG--TTTSSSATFDFSSNESPVTYQCSLDGAPFTACSDPQTLTGLADGEHTLAVRAVDAAGNE-DPTPATRTWTVDATAPDTTIVSGPAAVTNATSATFDFSSNESPVTYQCSLNGAPFAACSDPQSYTALPEGEHTLAVRAVDAAGNVDPTPAQYAWTVDLTSPALPTIDSPADQEEVATTTPTLTGTGEPG 1000
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A848LS83_9DELT (OmpA family protein n=1 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LS83_9DELT) HSP 1 Score: 91.7 bits (226), Expect = 1.110e-15 Identity = 95/315 (30.16%), Postives = 134/315 (42.54%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDD-GSV--------WEVHEGGACVFFFSLDGG-NYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
GSHT+ + AVD AGN DP PA +TW+VD P TS+ S P T+ +A F F S E+P++ + +++ A A D + + + N T AVD G+V W V F S + SAV + +GLADG+H L+V A A + DP P +++W DT++P TTI+S P L S F F S++ + C +D + C + F L+DG HS+ V AVD G DP+P TY W V
Sbjct: 751 GSHTLEVRAVDAAGNVDPTPATYTWTVDTVAPDTSIVSGPTGTTSSTSATFDF-------------DSPESPVTY-------------------QCSLDGAAFTACTDPQTFTGLAQGNHTLAVRAVDAAGNVDPTPATRTWTVDTTAPDTSFTSTPPTRSSSAVATFDFNSNESPVTYECSLNGATFVACSDPSTFSGLADGSHTLAVRARDA-AGNVDPTPATYTWTVDTAVPDTTIVSGPPALSNSASATFDFSSNESPVTYQCSLDGAAFTACADPRTFTGLTDGNHSLAVRAVDAAGNVDPSPATYAWTV 1032
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F50C2B8 (Ig-like domain-containing protein n=2 Tax=Pyxidicoccus sp. SCPEA002 TaxID=2813578 RepID=UPI001F50C2B8) HSP 1 Score: 91.7 bits (226), Expect = 1.130e-15 Identity = 84/301 (27.91%), Postives = 116/301 (38.54%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDARPR-TSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEV 906
G+HT+A+ AVD AGN DP PA W+VD P T + S P AVT+ TA F F SS ++P++ + SLD G Y+A + + TGLA G H LSV A A + DP P +++W DT+ P TTI+S P + S F F S++ + C +DSG + C + F L+ G H++ V AVD G DP P TY+W +
Sbjct: 701 GNHTLAVRAVDAAGNVDPTPATHAWTVDTSPPDTVIVSGPAAVTSATTATFDF-------------SSPDSPVT----------------------------------------------------------------YECSLDSGAYAACT--------------------------DPVTFTGLAQGNHTLSVRARDA-AGNVDPTPATYAWRVDTTAPDTTIVSGPASVTNSTSATFDFSSNESPVTYQCSLDSGAFVACTDPQTFTGLAQGNHTLAVRAVDAAGNVDPTPATYSWTI 897
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: F8CLT6_MYXFH (OmpA domain-containing protein n=3 Tax=Myxococcaceae TaxID=31 RepID=F8CLT6_MYXFH) HSP 1 Score: 89.7 bits (221), Expect = 4.470e-15 Identity = 97/354 (27.40%), Postives = 136/354 (38.42%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNET----AVDD-GSV--------WEVHEGGACVFFFS-------LDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLM---PSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEFCPPSHLPFQAAETQQVLLGASYDG 1005
G HT+A+ AVD AGN DP PA + W+VDA P T++ S P AVT TA F F SS E+P++ E +++ AP A D + + + N T AVD G++ W V S G + +P P TGL DG H L+VYA A + DP P +W D + P TTI+S P + + F F S++ + C ++ + C + F L +G ++ V AVD G DP P TY W V + + + A T L G G
Sbjct: 686 GDHTLAVRAVDAAGNADPSPATYAWTVDATAPDTTIVSGPAAVTNATTATFDF-------------SSNESPVTY-------------------ECSLDGAPFVACTDPQGFTGLSQGNHTLSVRAVDGVGNMDPTPATYAWTVDTAPPDTAIVSGPSGTTTSRGATFDFASDESPVTYQCSLDGGPFVPCTDPQP------YTGLGDGEHTLAVYAVDA-AGNVDPTPAVRTWTVDATAPETTIVSGPPAVTNATTATFDFSSNESPVTYECSLNGAPFTACTDPQPFTALPEGEQTLAVRAVDAVGNVDPTPATYAWTVDLTPPTLPTIDSPADQEEVATTTPTLTGTGEPG 1000
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F1BC852 (Ig-like domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F1BC852) HSP 1 Score: 88.2 bits (217), Expect = 1.400e-14 Identity = 96/325 (29.54%), Postives = 132/325 (40.62%), Query Frame = 1
Query: 1 YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDA-RPRTSLTSAPQAVTAVDTAFFSFA---------CALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSMLETVVEF 933
Y S G HT+A+ AVD AGN DP PA +TW+VD P T++ S P TA A F FA CAL + A S ++ N S ++Q +TA I P PA VD TA D S+ G + ++A E A + T L+ G H LSV A + + DP P + SW DT+ P TTI++ P S FTF +++ + + C +D + C + F LS G H++ V A D G DP P T W + + F
Sbjct: 669 YTSLSQGPHTLAVRAVDTAGNVDPTPATYTWTVDTVAPDTTIVSGPSGTTASANASFGFASNEAGVTYQCAL-DGAAFASCANPANLTGLSQGGHTLQVRAV-------DTAGNIDPTPAT----RSWTVD----TAAPDTSIVSGPSGTTASTSATF---TFNATETPATYECSLDNAAF--------VACTSPATFTDLSQGNHTLSVRA-RDTAGNIDPTPATRSWTVDTAAPDTTIVTGPSGTTASTSATFTFNATETPATYECSLDGAAFTACTSPATFTNLSQGNHTLSVQARDAVGNVDPTPATRTWTLDTVAPETTF 965
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: UPI001F082607 (OmpA family protein n=1 Tax=Myxococcus vastator TaxID=2709664 RepID=UPI001F082607) HSP 1 Score: 87.0 bits (214), Expect = 2.980e-14 Identity = 104/361 (28.81%), Postives = 142/361 (39.34%), Query Frame = 1
Query: 22 SHTVAIAAVDEAGNTDPEPAVWTWSVDAR-PRTSLTSAPQAVTAVDTAFFSFACALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAADDDEAEVAVDENNETAVDDGSVWE----VHEGGACVFFFS-----------LDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDKLMPSM---FTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSML--ETVVEFCPP-SHLPFQA-----AETQQVLLGASYDGVACAP 1020
+HT+A+ AVD AGN DP PA + W+VD P T++ SAP A T +A F F ES T S P+ N + G T V A A + D + D ++ V + F FS LDGG + P + TGLA+G H L V A + DP P +++W DT+ P TTI+S P S F F S + + C +D G + C + F L+DG H++ V AVD G DP P T W V +T++ PP + P A ++ V S DG A P
Sbjct: 303 NHTLAVRAVDSAGNVDPTPAEYEWTVDTTAPDTAIVSAPPATTTSSSATFDFDSN--ESPVTYQCSLDGAPVVPCTNPVTFTGLADGSH-----TLVVFAVDEAGNADVTPATYTWTVDATAPDTTIVSGPPAVTNSTSATFDFSSNESSVTYECSLDGGPF--------------------------VPCTDPQTFTGLAEGNHTLEVRAVDV-AGNVDPTPATYAWTVDTTAPDTTIVSGPSGATTSSSATFDFSSDESPVTYQCSLDGGPFVACTDPVTFTGLADGAHTLAVRAVDGAGNVDPTPATRTWTVDTTAPDTLIVTGPPLTDAPSAATFDFDSDESPVTYECSLDGAAYVP 629
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Match: A0A0G2ZEH0_9DELT (Ig-like protein group 3 n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZEH0_9DELT) HSP 1 Score: 84.7 bits (208), Expect = 1.530e-13 Identity = 90/318 (28.30%), Postives = 139/318 (43.71%), Query Frame = 1
Query: 19 GSHTVAIAAVDEAGNTDPEPAVWTWSVDARPR-TSLTSAPQAVTAVDTAFFSFA--------CALPESEATPSASSGENPLSTSDNDDSVQSATSGGEDGDDETAVEIAPAPAA-----DDDEAEVAVDEN--NETAVDDGSVWEVHEGGACVFFFSLDGGNYSAVEPAAPXXXXXXXXXXXXXXXXXEAPSRNTLLLTGLADGAHELSVYACKANSTECDPQPLSHSWETDTSLPVTTILSFPDK---LMPSMFTFGSSKPLSRFMCKVDSGLWRQCDETSKFP-LSDGLHSVVVMAVDPTGRSDPNPITYNWEVSM 912
G+H + ++AVD AGN DP PAV+TW+VD P T++ S P ++T V +A F F+ C+L + A + + E ++ ++Q + A + P PA+ D E + N N + D + E GA F SLDG ++ P + TGL DG+H V A A + DP P S++W D ++P T I+S P + F F S +P F C +D + C + F L + H+++V A D +G DP+P Y+W V +
Sbjct: 857 GAHRLEVSAVDAAGNMDPTPAVYTWTVDLTPPDTTIVSGPPSLTNVTSATFDFSSEAGATFECSL-DGAAFTACADPETFTGLTEKAYTLQVRAR-------DAAGNVDPTPASYTWTVDFSAPETTLVSNPPNPSNSPDATFDFSSEAGA-TFECSLDGAPFT--------------------------PCTGPVSFTGLGDGSHTFQVRAVDA-AGNVDPTPASYTWTVDAAVPETLIVSGPPSRTNATSATFDFMSPEPGVTFECSLDGAAFSACADPETFTGLDERTHTLLVRARDASGNVDPSPAIYSWTVDL 1138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15127.3869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig15127.3869.1 >prot_Ecto-sp13_S_contig15127.3869.1 ID=prot_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=489bp YASELPGSHTVAIAAVDEAGNTDPEPAVWTWSVDARPRTSLTSAPQAVTAback to top mRNA from alignment at Ecto-sp13_S_contig15127:3..4249+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig15127.3869.1 ID=mRNA_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4247bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15127:3..4249+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15127:3..4249+ >mRNA_Ecto-sp13_S_contig15127.3869.1 ID=mRNA_Ecto-sp13_S_contig15127.3869.1|Name=mRNA_Ecto-sp13_S_contig15127.3869.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1467bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15127:3..4249+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |