prot_Ecto-sp13_S_contig15125.3868.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15125.3868.1
Unique Nameprot_Ecto-sp13_S_contig15125.3868.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length246
Homology
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 3.010e-164
Identity = 230/246 (93.50%), Postives = 237/246 (96.34%), Query Frame = 0
Query:    1 MRLRKIKGEAALLAVAAMLTSATIVPAEDQHKFHNKFQRVPPKGPRPQAQAQQSPASDTIGVDGHNGSSSAPEHREVVPPAVAAAPGVAVEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCH 246
            MRLRKIKGEAALLAVAAMLTSATIVPAED+HKFH KF R PPKGPRP AQA QSPAS T GVDG++GSSSAPEHREVVP A +AAPGV++EGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAG+RAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCH
Sbjct:    1 MRLRKIKGEAALLAVAAMLTSATIVPAEDRHKFHKKFLRAPPKGPRPLAQAPQSPASHTTGVDGNDGSSSAPEHREVVPSAASAAPGVSLEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCH 246          
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.500e-62
Identity = 93/152 (61.18%), Postives = 113/152 (74.34%), Query Frame = 0
Query:   94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLC 245
            C Y I  A+ A  +  D ++ GNVVKV HL F RTGN F + +RNLALGYCCK+K VWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPDVDG D   C  DI W  + A  M  LD+PE   + P +++C+A+APRLL CEAAYYFP+D+ +C
Sbjct:   59 CTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVC 210          
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: D7G2M2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.570e-56
Identity = 84/152 (55.26%), Postives = 112/152 (73.68%), Query Frame = 0
Query:   94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLC 245
            CPY++ T  E + R++D ++PGNV+ +    F R GN F +   NL LGYCCKSK+V LP KDD LAPG+F +GTPGPRW+DF++APDV+GFD+S+C ADITW G+ AFH+  LD+P H +++P L  C+   PRL  CEAAY+FP  VD+C
Sbjct:  124 CPYILRTPGERL-RMRDPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVC 274          
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 7.650e-55
Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   86 PGVAVEGGCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKD--VDLC 245
            P V     CPY I + EEA  R  + S PGNVV V    +CR GN F+S  R+L+LGYCCKS+++ LPPKD+ LAPG FN+G PGPR FDFSSAPDV+GFD S+C  +ITW G  AFH+  L    H ++TP L ECI   PR+  CEAAY+FPKD  VD+C
Sbjct:  139 PVVPFSSSCPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMC 300          
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.260e-49
Identity = 88/160 (55.00%), Postives = 105/160 (65.62%), Query Frame = 0
Query:   94 CPYVIDTAEEAISRIK------DKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKD--VDLC 245
            CPY I   EE   R        + S PGNVV V    +CR GN F S  R+L+LGYCCKS++V LPPKDD LAPG FN GTPGPR FDFSSAPDV+GFDSS+C  +I W G +AFH+  L    H ++TPGL  CI   P ++ CEAAY+FP D  V +C
Sbjct:  146 CPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMC 305          
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 5.020e-5
Identity = 48/160 (30.00%), Postives = 68/160 (42.50%), Query Frame = 0
Query:   93 GCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQG--TPGPRWFDFSSA-PDVDGFDS-----SACSADITWAGKRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDL 244
            GCP  +  ++ A + +   +   N + +      R+GNHF      LA+G+CC+S+++ LP  D  + PG    G    G RWFDFS   P   GF+        C   +      AF    + S         L  C+ R   L  CE AY   K VDL
Sbjct:   88 GCPQALSRSQ-AEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSR--------LLRCMNRV-YLRGCEKAY-LGKMVDL 235          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15125.3868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5K2F3_9PHAE3.010e-16493.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G610_ECTSI1.500e-6261.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G2M2_ECTSI1.570e-5655.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K7B3_9PHAE7.650e-5556.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1L4_ECTSI1.260e-4955.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV9_ECTSI5.020e-530.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15125contigEcto-sp13_S_contig15125:130..4250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15125.3868.1mRNA_Ecto-sp13_S_contig15125.3868.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15125 130..4250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15125.3868.1 ID=prot_Ecto-sp13_S_contig15125.3868.1|Name=mRNA_Ecto-sp13_S_contig15125.3868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=246bp
MRLRKIKGEAALLAVAAMLTSATIVPAEDQHKFHNKFQRVPPKGPRPQAQ
AQQSPASDTIGVDGHNGSSSAPEHREVVPPAVAAAPGVAVEGGCPYVIDT
AEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVV
WLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGKR
AFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCH
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