mRNA_Ecto-sp13_S_contig15120.3865.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig15120.3865.1
Unique NamemRNA_Ecto-sp13_S_contig15120.3865.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: D8LIS9_ECTSI (Branched chain amino acid aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIS9_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 1.560e-130
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F   RHL RLQDSAHALAFEAIPSSKDITVAIMATLAAN+MVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKG KL+TPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGE+
Sbjct:  358 FCLDRHLRRLQDSAHALAFEAIPSSKDITVAIMATLAANNMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGGKLLTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEL 570          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S2SSM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSM2_9STRA)

HSP 1 Score: 280 bits (715), Expect = 9.840e-86
Identity = 142/213 (66.67%), Postives = 169/213 (79.34%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F   +HL RL  SA ALAF  +P++++I  A+  TLAAN+M DG H R+TLTRG KTTSSMNP FNVFG TLIVLAE K V   ATYDN  G+ L+TA+NRRNPP CLDS IHHNNLLNNILPKIQAN AGA+DA+MLD++GFV+ETNATN+F  + E ++TP A +CLPG+TRGLI+ L  ELG   EE+RVSL+E H ADEVFTTGTMGE+
Sbjct:  351 FMLEKHLERLYASARALAFRNVPTAEEIRRALFTTLAANNMRDGVHVRLTLTRGEKTTSSMNPAFNVFGTTLIVLAEWKPVQSIATYDNANGIKLITATNRRNPPSCLDSKIHHNNLLNNILPKIQANVAGASDAIMLDLDGFVAETNATNLFAVRNETVLTPTADACLPGVTRGLIIALCKELGTPLEERRVSLAEFHAADEVFTTGTMGEL 563          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A8J5XF99_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF99_DIALT)

HSP 1 Score: 272 bits (695), Expect = 3.890e-83
Identity = 141/214 (65.89%), Postives = 169/214 (78.97%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAE-LGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F   RHL RL DSA AL F+ + S   +  A++ TLAAN M DGAH R+TLTRG KTTSSMNP FN +GCTLIVLAE K V G ATYDN  GV+LVTA+NRRNPP C+DS IHHNNL+NNILPKIQAN AGAADA+MLD++GFV+ETNATN+F+ K  +L+TP+A +CLPG+TR  ++ L  + LGV   E+RVSL+E H ADEVFTTGTMGE+
Sbjct:  337 FKFERHLRRLYDSAKALNFQNVHSPAQVREAVLQTLAANGMRDGAHIRLTLTRGVKTTSSMNPLFNAYGCTLIVLAEWKPVVGVATYDNAAGVSLVTAANRRNPPSCIDSKIHHNNLINNILPKIQANLAGAADALMLDLDGFVAETNATNVFVVKDGRLLTPSADACLPGVTREAVMALGRDVLGVEVIERRVSLAEFHTADEVFTTGTMGEL 550          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S2YA45_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YA45_9STRA)

HSP 1 Score: 260 bits (665), Expect = 3.210e-82
Identity = 137/212 (64.62%), Postives = 159/212 (75.00%), Query Frame = 1
Query:   37 SCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            S  +HL RL  SA AL FE + + ++IT AI  TLAAN M D AH R+TLTRG K TSSMNP FNV+G TLI+L E K   GA TYDN  G++L+T+S RRN PQ LDS IHHNN++NNILPKIQAN AG  DAVMLD++GFVSETNATNIFM     L+TP A  CLPGITR  +L LA ELG+  E +RVSL+E H ADEVFTTGTMGE+
Sbjct:   42 SLEKHLRRLSKSAKALGFENVHTKEEITEAIFRTLAANGMRDSAHMRLTLTRGEKCTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNTAGISLITSSQRRNSPQVLDSKIHHNNMINNILPKIQANLAGCEDAVMLDLDGFVSETNATNIFMVDDGVLLTPHADHCLPGITRATVLVLAKELGIQTEVRRVSLAEFHAADEVFTTGTMGEL 253          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A6U4DSS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DSS2_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.230e-80
Identity = 135/213 (63.38%), Postives = 161/213 (75.59%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F    HL RL DSA A+ F+   + +++  A++ TLAAN M DG H R+TLTRG KTTSSMNP FNVFG TLIVLAE K V   ATYDN  GV+L+TA+ RRNPP C+DS IHHNNL+NNILPKIQAN AGAADA+MLD+ GFV+ETNATN+F+ K   + TP   +CLPGITRG +L LA ELG    E+ +SL+E H ADEVFTTGTMGE+
Sbjct:  187 FKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLRLARELGYEVYERNISLAEFHAADEVFTTGTMGEL 399          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S1URX8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URX8_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.580e-80
Identity = 144/217 (66.36%), Postives = 168/217 (77.42%), Query Frame = 1
Query:   37 SCPRHLGRLQDSAHALAF---EAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKE-VGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGE-KLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            S  +HL RL +SA AL F       +  +IT AI  TLAAN M DGAH R+TL+RG KTTSSMNP FN++G TLIVLAE K  VGGA TYDN  G+TL++AS RRNPPQC+DS IHHNN++NNILPKIQAN AGAADA+MLDV+GFVSETNATNIFM     KL+TP A  CLPGITR  ++ELA EL + AEE+R+SL+E H A EVFTTGTMGE+
Sbjct:  329 SLEKHLTRLMNSAKALGFGMNSRCHTRPEITEAIFRTLAANGMRDGAHMRLTLSRGIKTTSSMNPKFNIYGTTLIVLAEWKPTVGGATTYDNTKGITLISASQRRNPPQCVDSKIHHNNMINNILPKIQANLAGAADAIMLDVDGFVSETNATNIFMVDHTGKLLTPHADHCLPGITRATVMELARELDIPAEERRISLAEFHAAAEVFTTGTMGEL 545          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S2UVM1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVM1_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.950e-80
Identity = 133/212 (62.74%), Postives = 159/212 (75.00%), Query Frame = 1
Query:   37 SCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            S  RHL RL  SA A+ F  + S ++I  AI   LAAN M DGAH R+TLTRG K+TSSMNP FNV+G TLI+L E K   GA TYDN  GV+L+TA+NRRNPP  +DS IHHNNL+NNILPK+QAN AGAADA+MLD++GFVSETNATN+F+     L+TP A  CLPGITR  ++ LA EL +   E+RVSL+E H ADE FTTGTMGE+
Sbjct:   12 SLERHLRRLFKSARAMGFANVHSKEEIIDAIFQVLAANGMRDGAHMRLTLTRGEKSTSSMNPKFNVYGTTLIILPEWKPTEGATTYDNAKGVSLITAANRRNPPSTVDSKIHHNNLINNILPKLQANLAGAADAIMLDLDGFVSETNATNLFIVDDGVLLTPHADHCLPGITRQTVIMLAQELDIPCVERRVSLAEFHSADECFTTGTMGEL 223          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S1TU62_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU62_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.170e-78
Identity = 135/213 (63.38%), Postives = 161/213 (75.59%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F    HL RL DSA A+ F+   + +++  A++ TLAAN M DG H R+TLTRG KTTSSMNP FNVFG TLIVLAE K V   ATYDN  GV+L+TA+ RRNPP C+DS IHHNNL+NNILPKIQAN AGAADA+MLD+ GFV+ETNATN+F+ K   + TP   +CLPGITRG +L LA ELG    E+ +SL+E H ADEVFTTGTMGE+
Sbjct:  369 FKFEAHLDRLFDSARAMDFKDCHTREEVRDAVIETLAANGMRDGVHIRLTLTRGEKTTSSMNPMFNVFGTTLIVLAEWKPVVSVATYDNKKGVSLITATQRRNPPMCVDSKIHHNNLINNILPKIQANLAGAADALMLDIHGFVAETNATNVFLVKRGAVHTPTGDACLPGITRGTVLRLARELGYEVYERNISLAEFHAADEVFTTGTMGEL 581          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A9V1Y4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V1Y4_MONBE)

HSP 1 Score: 271 bits (692), Expect = 2.230e-78
Identity = 142/228 (62.28%), Postives = 171/228 (75.00%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAEEKRVSLSELHCADEVFTTGTMGEVYQTDQALRRNLLTKA 717
            F+  +HL RL DSA A+ F  IP+ + IT  ++ TLAAN+M DG H R+TL+RG KTTSSMNP FNV+G TLIVL E K V G ATYDN  GV L+TAS RRNPPQCLDS IHH NL+NNILPKIQAN+AGAADA+MLDV+GFV ETNATNIF  K + + TPAA  CLPG TR   + +  +LG+  +E+RV+LSELH ADEVFTTGTMGE+    +   R++ T A
Sbjct: 1247 FNLDKHLDRLVDSAKAMGFADIPTREAITQEVVRTLAANNMRDGVHIRLTLSRGLKTTSSMNPRFNVYGSTLIVLPEWKPVEGVATYDNSTGVRLITASQRRNPPQCLDSKIHHCNLINNILPKIQANSAGAADAIMLDVDGFVCETNATNIFAIKNKVVYTPAADFCLPGTTRATTIYICQKLGLTVQERRVTLSELHAADEVFTTGTMGELTPVFEIDGRSICTGA 1474          
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Match: A0A7S0STR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STR7_9STRA)

HSP 1 Score: 245 bits (626), Expect = 5.450e-77
Identity = 129/214 (60.28%), Postives = 159/214 (74.30%), Query Frame = 1
Query:   34 FSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAANDMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDNDLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLDVEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAE-LGVLAEEKRVSLSELHCADEVFTTGTMGEV 672
            F    H+ RL  SA A+ F  IPS   I  AI+ TL  N+M+D  H R+TLTRG K TSSMNP FN+FGC L+V+ E K+V    TY+N LG++L+T+  RRN PQC+DS IHHNNL+NNILPKIQANNA AADA+MLD+EGFVSETNATNIFM K   + TP A SCLPGITR  +++L ++ L +   EKR+SL+E + ADEVFTTGTMGE+
Sbjct:    3 FMLDEHINRLIHSAIAMHFTDIPSRSFIINAIVTTLLTNNMLDNCHIRLTLTRGPKVTSSMNPKFNIFGCNLLVVPEWKKVEDITTYNNQLGISLITSCIRRNSPQCVDSKIHHNNLINNILPKIQANNANAADALMLDLEGFVSETNATNIFMVKDGVVYTPFADSCLPGITRQTVIKLVSKVLEIPMLEKRLSLTEFYTADEVFTTGTMGEI 216          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15120.3865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIS9_ECTSI1.560e-13096.24Branched chain amino acid aminotransferase n=2 Tax... [more]
A0A7S2SSM2_9STRA9.840e-8666.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5XF99_DIALT3.890e-8365.89Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2YA45_9STRA3.210e-8264.62Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A6U4DSS2_9STRA1.230e-8063.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1URX8_9STRA1.580e-8066.36Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2UVM1_9STRA7.950e-8062.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TU62_9STRA1.170e-7863.38Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A9V1Y4_MONBE2.230e-7862.28Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7S0STR7_9STRA5.450e-7760.28Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15120contigEcto-sp13_S_contig15120:3..2781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score397.1
Seed ortholog evalue8e-108
Seed eggNOG ortholog2880.D8LIS9
Model size1006
KEGG rclassRC00006,RC00036
KEGG koko:K00826
KEGG ReactionR01090,R01214,R02199,R10991
KEGG Pathwayko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00036,M00119,M00570
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.branched-chain-amino-acid transaminase activity
EggNOG OGsCOG0115@1,KOG0975@2759
EC2.6.1.42
Cds size1005
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462804.9491732-CDS-Ecto-sp13_S_contig15120:2..2411681462804.9491732-CDS-Ecto-sp13_S_contig15120:2..241Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15120 3..241 +
1681462804.9621978-CDS-Ecto-sp13_S_contig15120:834..9941681462804.9621978-CDS-Ecto-sp13_S_contig15120:834..994Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15120 835..994 +
1681462804.9718192-CDS-Ecto-sp13_S_contig15120:1645..18001681462804.9718192-CDS-Ecto-sp13_S_contig15120:1645..1800Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15120 1646..1800 +
1681462804.9820204-CDS-Ecto-sp13_S_contig15120:2330..27811681462804.9820204-CDS-Ecto-sp13_S_contig15120:2330..2781Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig15120 2331..2781 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15120.3865.1prot_Ecto-sp13_S_contig15120.3865.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig15120 3..2781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig15120.3865.1

>prot_Ecto-sp13_S_contig15120.3865.1 ID=prot_Ecto-sp13_S_contig15120.3865.1|Name=mRNA_Ecto-sp13_S_contig15120.3865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=335bp
SGTPAYALVCFFSCPRHLGRLQDSAHALAFEAIPSSKDITVAIMATLAAN
DMVDGAHARVTLTRGTKTTSSMNPDFNVFGCTLIVLAERKEVGGAATYDN
DLGVTLVTASNRRNPPQCLDSAIHHNNLLNNILPKIQANNAGAADAVMLD
VEGFVSETNATNIFMAKGEKLVTPAAGSCLPGITRGLILELAAELGVLAE
EKRVSLSELHCADEVFTTGTMGEVYQTDQALRRNLLTKAKRPSPFRCSVI
LFCCFPLAVSTIWSGDCRVLRVTCDDMLHAVPLTRALARVFPSRQGETFE
SDDWFPFECSPAPYALSLSECRHLFRNLTLIQSLS
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mRNA from alignment at Ecto-sp13_S_contig15120:3..2781+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig15120.3865.1 ID=mRNA_Ecto-sp13_S_contig15120.3865.1|Name=mRNA_Ecto-sp13_S_contig15120.3865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2779bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15120:3..2781+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGAACTCCTGCCTACGCCCTGGTTTGCTTTTTTTCGTGCCCCAGGCA CCTGGGACGCCTACAAGATTCCGCCCATGCCCTCGCCTTCGAGGCGATCC CGTCTTCCAAAGACATTACTGTGGCCATTATGGCCACGCTTGCCGCTAAC GATATGGTGGACGGGGCCCACGCGAGGGTAACCCTGACCAGGGGTACCAA GACCACGTCCAGCATGAACCCCGACTTTAACGTCTTTGGGTGAGCGGACT TGGGTCTTGTAGGGTTTTCCCCGAAATTCATCCCGATTCGGGCTACCCTG GTGGAATGGTAGCTCAGTCACGTGCCAACACCAGGCGCACCATCGGTTTT CTCTCCCCTTTCGCTGGGACAAAAGTGGTTGGCTTCAAGATCTAGATCGG AGTGTGAAAGTGACGGCTTTCCTTTGATCGGCAATCTGTCTCTTCCCGTC CACGGGCGTGAAACAAGGCTCGCTCAACCTCTAGGTAAAATCTGGTCTGG GTGTATTCTCATTCCTCATTTCGAGCGGACGGCGTTTGCGATGTGCCCGG GCCCAGCTCCGAGCGAAACTGGGAACCGCATGTTGACAGTCTCGGTGAAG AGGGAGACGGCAGGGGGAAGCGGTACCGTTCGAGTGATACCACTAGCTTG CAAGATCGGCCATGTTCATGAAATTCAACGTCAACGACACACCGCCAAGC CACCTACTAGAGCTTTCACATACATTTGTATTGCCAAATGGTGCTCGATG TTGGACCTGTTTCGTTTTTCTTTGGCGAAGACGCGAATGAGATGGATATT CTGACGTGCTCCACCTCATGCGTCTTGTCCAGGTGCACCTTGATTGTTCT AGCCGAGAGGAAAGAGGTCGGCGGAGCGGCAACGTACGACAACGACCTCG GCGTTACTCTGGTCACCGCCTCCAATAGACGAAATCCTCCACAATGCCTC GATTCCGCTATCCACCACAACAACCTCCTCAACAACATATTGGTGAGCGC TGCTGCTCCTTCCCGAACCCGTTCGCGCCTTTGCTGCTTGTGTCGGGCAA TCGTTTTCTTTTATGTCCATTCCTTGCTTTGGTTTGGTGGATTGGGCGAA AAAAAGAGCTGAGTCGTAGGTACTCTTTTGCTGGAGTGGTAGTCCTCTGG TCTGCCGTTCAACGCCAGAGTATCTGCATGCCGTAAATATCTCATGATCA GTGAAAAGTTGTTCGCTTGTGGAACGTTTTCGGCATCGTATTTTCCCTCA ATCGTTACCGAAATGTTCGGTTGGTAATTGTCGCCTTTGCTTTGGGCATC TGATATTCCCTGGGATTTTCAGACGAACGATCACCACAGGCCCTCAGCGC CATCTATCCTAGGGCACAAATCCCCAGTCACAGCGCCACGGGGTCATGTT TCCGAAAAATCTCTTTCAGAATCTACATGTTTGAAAACCTTGTTTACGAA CGTCGATGAAGGGTACATGTTAAGGTGATGCGCGAATGCGCACCCTCACC GAGGCGATAGACGCTCCCTCCTGTAGCGTATTTTCCCCTTGTTCATTGAT GTCTTGCTTTCGCTTTCCTTTGTTTGCCCCGTCGGTTCATTTCCGTATTC GTCGGTTCACTTCCGTATTCGTTTCATTCTTTGTTCAACGAAGCCCAAGA TCCAGGCTAACAACGCCGGAGCCGCCGACGCGGTCATGCTGGACGTCGAG GGCTTTGTTTCCGAGACGAATGCAACCAATATCTTCATGGCCAAGGGGGA GAAGCTGGTGACACCGGCCGCCGGCAGCTGTCTGCCGGGTATCACGAGGT GCGGGACCACTCTATGCTTTGGCCAAAGAGCCTCCGATTCATTCCCTTGC GCTACGTTTGTATGTGTAGCTCCATAGGTATCAGTGATGTGGTCGGAAAA GCTCGCCAAACGTGCCGGTTGTTGCATCACTAAGCGCGTTCGTGGCCAAG GGGGCACAGGACACTCACCTCCGCAACCTTCGTTTCTTCCTCAAGGGTTC AAAATGCAACGGTACTCGTGCCGGTGTGCCGGTGATGGCCGTCGTCTTGC GCAGTTTACCGAGACGAGCATCCTTGCCACCGAAATCTGGCGAGAGAGAG GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATACTCAT GTTTTCCTCGCGTCGAGAGCTTCGATAGTCTCGACCCGCGTGCTGTGTGC GGACCACATCTGTTGCGCAAAGCAAAACGTTTGATTTCTTGATTGTGCTG ATAGCCGGTACGACGAGGGTCGCTCATGTTTGCCTTTGGGCTGTGTCTGC CGAATCGAACTTGCGGCGACATTCGAAGGGGCCTCATCTTGGAGCTGGCA GCCGAACTCGGCGTTCTCGCGGAGGAGAAGAGGGTTTCCCTGTCCGAGCT GCATTGCGCGGACGAGGTCTTCACAACGGGTACCATGGGAGAGGTATATC AGACAGATCAAGCCCTCCGACGTAACTTGCTCACCAAGGCGAAGCGGCCT TCCCCCTTCCGCTGCTCTGTAATACTGTTTTGCTGTTTTCCTCTTGCAGT TTCCACAATATGGAGTGGAGATTGTCGGGTTTTGCGTGTCACGTGTGACG ATATGCTTCATGCGGTGCCATTGACGCGGGCGCTAGCACGTGTCTTTCCC TCCCGCCAAGGTGAAACATTCGAGTCGGACGATTGGTTTCCTTTCGAATG CTCCCCGGCTCCGTATGCGTTGTCTCTGTCGGAATGCCGTCATTTGTTTC GGAACCTGACCCTCATCCAGTCTCTCTCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig15120:3..2781+

>mRNA_Ecto-sp13_S_contig15120.3865.1 ID=mRNA_Ecto-sp13_S_contig15120.3865.1|Name=mRNA_Ecto-sp13_S_contig15120.3865.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1005bp|location=Sequence derived from alignment at Ecto-sp13_S_contig15120:3..2781+ (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGAACTCCTGCCTACGCCCTGGTTTGCTTTTTTTCGTGCCCCAGGCA
CCTGGGACGCCTACAAGATTCCGCCCATGCCCTCGCCTTCGAGGCGATCC
CGTCTTCCAAAGACATTACTGTGGCCATTATGGCCACGCTTGCCGCTAAC
GATATGGTGGACGGGGCCCACGCGAGGGTAACCCTGACCAGGGGTACCAA
GACCACGTCCAGCATGAACCCCGACTTTAACGTCTTTGGGTGCACCTTGA
TTGTTCTAGCCGAGAGGAAAGAGGTCGGCGGAGCGGCAACGTACGACAAC
GACCTCGGCGTTACTCTGGTCACCGCCTCCAATAGACGAAATCCTCCACA
ATGCCTCGATTCCGCTATCCACCACAACAACCTCCTCAACAACATATTGC
CCAAGATCCAGGCTAACAACGCCGGAGCCGCCGACGCGGTCATGCTGGAC
GTCGAGGGCTTTGTTTCCGAGACGAATGCAACCAATATCTTCATGGCCAA
GGGGGAGAAGCTGGTGACACCGGCCGCCGGCAGCTGTCTGCCGGGTATCA
CGAGGGGCCTCATCTTGGAGCTGGCAGCCGAACTCGGCGTTCTCGCGGAG
GAGAAGAGGGTTTCCCTGTCCGAGCTGCATTGCGCGGACGAGGTCTTCAC
AACGGGTACCATGGGAGAGGTATATCAGACAGATCAAGCCCTCCGACGTA
ACTTGCTCACCAAGGCGAAGCGGCCTTCCCCCTTCCGCTGCTCTGTAATA
CTGTTTTGCTGTTTTCCTCTTGCAGTTTCCACAATATGGAGTGGAGATTG
TCGGGTTTTGCGTGTCACGTGTGACGATATGCTTCATGCGGTGCCATTGA
CGCGGGCGCTAGCACGTGTCTTTCCCTCCCGCCAAGGTGAAACATTCGAG
TCGGACGATTGGTTTCCTTTCGAATGCTCCCCGGCTCCGTATGCGTTGTC
TCTGTCGGAATGCCGTCATTTGTTTCGGAACCTGACCCTCATCCAGTCTC
TCTCT
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