prot_Ecto-sp13_S_contig15083.3841.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig15083.3841.1
Unique Name	prot_Ecto-sp13_S_contig15083.3841.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	311

Homology

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BLAST of mRNA_Ecto-sp13_S_contig15083.3841.1 vs. uniprot
Match: D8LRP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP6_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 6.860e-117
Identity = 281/311 (90.35%), Postives = 285/311 (91.64%), Query Frame = 0

Query:    1 KSPSSSRSGSLSSPPLPSQSPKEEATEKAAESPAPATPSGTAVTKTVSNASKAWKASKPTRRSSSSWRQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRMVQWAEDWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVQQNLEDAKQFLANADDLYSKHLERAERERYAYAVKRSVDDLIRESNLAAVQGEFRTEPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDLISDLPDGYVTEAHGSNDDYSISEAWMRTYMKESSASKASASSA 311
            K PS SRSGS SSPPLPSQSPKEEAT            SGTAVTKT S ASKA   SKPT ++SSS  QTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRMV+WAED  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVQQNLEDAK+FLANADDLYSKHLERAERERYAYAVKRSVDDLIRESNLAAVQGEFRTEPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDLISDLPDGYVTEAHGSNDDYSISEAWMRTYMKESSASKA ASSA
Sbjct:  403 KRPSFSRSGS-SSPPLPSQSPKEEATXXXXXXXXXXXXSGTAVTKTASKASKA---SKPTGKASSSSLQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRMVEWAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVQQNLEDAKRFLANADDLYSKHLERAERERYAYAVKRSVDDLIRESNLAAVQGEFRTEPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDLISDLPDGYVTEAHGSNDDYSISEAWMRTYMKESSASKAGASSA 709

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BLAST of mRNA_Ecto-sp13_S_contig15083.3841.1 vs. uniprot
Match: A0A6H5JGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP4_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 3.660e-97
Identity = 246/303 (81.19%), Postives = 251/303 (82.84%), Query Frame = 0

Query:    3 PSSSRSGSLSSPPLPSQSPKEEATEKAAESPAPATPSGTAVTKTVSNASKAWKASKPTRRSSSSWRQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRMVQWAEDWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVQQNLEDAKQFLANADDLYSKHLERAERE--------------------------RYAYAVKRSVDDLIRESNLAAVQGEFRTEPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDLISDLPDGYVTE 279
            PSSSRSGS SSPPLPSQSPKE AT KAAE PAPATPSGTAVTKT S      KA KPT R+SS   QTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGR+VQWAEDWK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +QQNLEDA +FLANADDLYSKHLERAERE                          RYAYAVKRSVDDLIRESNLAAVQGEFR EPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDL+SDLPDGYVTE
Sbjct:  402 PSSSRSGS-SSPPLPSQSPKEVATAKAAEPPAPATPSGTAVTKTAS------KALKPTGRASSPSLQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRIVQWAEDWKSEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEDMQQNLEDAMRFLANADDLYSKHLERAEREVFLLASNICICFSNCSDACNTRSRGQRYAYAVKRSVDDLIRESNLAAVQGEFRAEPFPLRVYQQYLTTYRPARDLRPEDRKAIEVDLVSDLPDGYVTE 697

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig15083.3841.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig15083.3841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRP6_ECTSI	6.860e-117	90.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JGP4_9PHAE	3.660e-97	81.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 119..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig15083	contig	Ecto-sp13_S_contig15083:3..2799 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig15083.3841.1	mRNA_Ecto-sp13_S_contig15083.3841.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig15083 2..2799 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig15083.3841.1 ID=prot_Ecto-sp13_S_contig15083.3841.1|Name=mRNA_Ecto-sp13_S_contig15083.3841.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=311bp
KSPSSSRSGSLSSPPLPSQSPKEEATEKAAESPAPATPSGTAVTKTVSNA
SKAWKASKPTRRSSSSWRQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLD
WAGLRADIAGMVGRMVQWAEDWKSEREQEKNQRRQRRRRRRCRADGCGTG
GDAKGATQEAGGEGEADEEDDDEEGEEHVQQNLEDAKQFLANADDLYSKH
LERAERERYAYAVKRSVDDLIRESNLAAVQGEFRTEPFPLRVYQQYLTTY
RPARDLRPEDRKAIEVDLISDLPDGYVTEAHGSNDDYSISEAWMRTYMKE
SSASKASASSA