prot_Ecto-sp13_S_contig15069.3826.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15069.3826.1
Unique Nameprot_Ecto-sp13_S_contig15069.3826.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15069.3826.1 vs. uniprot
Match: D8LF57_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF57_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 6.260e-116
Identity = 163/172 (94.77%), Postives = 166/172 (96.51%), Query Frame = 0 
Query:    1 MMKPTARGPLFFGVVVLVLAASGEAFFAAAPAPAVFKSCAFRTTTTNVNAVRHGGPQDQEDPELSVFDAGETAVSWEDYKKQKPDEFKLDAVDEMQCWKTDECPVEDEKKFTKAWEIHSAERNPTMETHFDSEGEWEEESKGAWSKKWHEDVGEDDLHEDIVSPAAKDGYGI 172
            MMKPTARG LFFGVV+LVLAASGEAFF AAPAPAVFKS A+R TTTNVNAVRHGG QDQ+DPELSVFDAGETAVSWEDYKKQKPDEFKLDAVDEMQCWKTDECPVEDEKKFTKAWEIHSAERNPTMETHFDSEGEWEEESKGAWSKKWHEDVGEDDLHED VSPAAKDGYGI
Sbjct:    1 MMKPTARGRLFFGVVLLVLAASGEAFFTAAPAPAVFKSRAYRITTTNVNAVRHGGQQDQQDPELSVFDAGETAVSWEDYKKQKPDEFKLDAVDEMQCWKTDECPVEDEKKFTKAWEIHSAERNPTMETHFDSEGEWEEESKGAWSKKWHEDVGEDDLHEDTVSPAAKDGYGI 172
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15069.3826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF57_ECTSI6.260e-11694.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.798
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15069contigEcto-sp13_S_contig15069:314..3405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15069.3826.1mRNA_Ecto-sp13_S_contig15069.3826.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15069 314..3405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15069.3826.1 ID=prot_Ecto-sp13_S_contig15069.3826.1|Name=mRNA_Ecto-sp13_S_contig15069.3826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
MMKPTARGPLFFGVVVLVLAASGEAFFAAAPAPAVFKSCAFRTTTTNVNA
VRHGGPQDQEDPELSVFDAGETAVSWEDYKKQKPDEFKLDAVDEMQCWKT
DECPVEDEKKFTKAWEIHSAERNPTMETHFDSEGEWEEESKGAWSKKWHE
DVGEDDLHEDIVSPAAKDGYGI*
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