prot_Ecto-sp13_S_contig15068.3825.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15068.3825.1
Unique Nameprot_Ecto-sp13_S_contig15068.3825.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15068.3825.1 vs. uniprot
Match: D7G5A2_ECTSI (Probable chromatin remodelling complex ATPase chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A2_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 4.940e-23
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 0 
Query:    1 GWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK 45
            GWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK
Sbjct: 1051 GWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK 1095
[Close]
BLAST of mRNA_Ecto-sp13_S_contig15068.3825.1 vs. uniprot
Match: A0A7S2G4P9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4P9_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 6.530e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:    1 GWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK 45
            G+GNW KVRA I A PRF FDY+LRSL+ T LGK CE LM+ + K
Sbjct:   22 GYGNWAKVRAEIRACPRFKFDYFLRSLNATDLGKRCETLMREATK 66
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15068.3825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5A2_ECTSI4.940e-23100.00Probable chromatin remodelling complex ATPase chai... [more]
A0A7S2G4P9_9STRA6.530e-1164.44Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 1..45
e-value: 1.0E-13
score: 51.3
NoneNo IPR availableGENE3D1.10.10.60coord: 1..45
e-value: 5.3E-10
score: 41.0
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15068contigEcto-sp13_S_contig15068:86..220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15068.3825.1mRNA_Ecto-sp13_S_contig15068.3825.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15068 86..220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15068.3825.1 ID=prot_Ecto-sp13_S_contig15068.3825.1|Name=mRNA_Ecto-sp13_S_contig15068.3825.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
GWGNWRKVRACILASPRFTFDYYLRSLSETALGKHCEQLMKSSEK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015195SLIDE
IPR009057Homeobox-like_sf