prot_Ecto-sp13_S_contig15063.3823.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig15063.3823.1
Unique Nameprot_Ecto-sp13_S_contig15063.3823.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
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BLAST of mRNA_Ecto-sp13_S_contig15063.3823.1 vs. uniprot
Match: D8LRY5_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY5_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.070e-42
Identity = 101/124 (81.45%), Postives = 103/124 (83.06%), Query Frame = 0 
Query:   15 HFFGPGSTGEVDAQGEGVADAGSSPRAGGILSPRALENLTPRSRARRRASASVKLRRGSVGPAAGQHKTASIGGLGGGNAAIGSLGGXXXXXXAGADHEETGTKKEE---EAGPSLFGGEPKLY 135
            HFFGPGS GEVDAQGEGV DAGSSPRAGGILSPRALENLTPRSRARRRASASVKLRRGS+GPAAGQHKTASIGGLGGGNAAI S+GGXXXXXX                 E GPSLFGGEPKLY
Sbjct: 2508 HFFGPGSRGEVDAQGEGVPDAGSSPRAGGILSPRALENLTPRSRARRRASASVKLRRGSIGPAAGQHKTASIGGLGGGNAAIVSVGGXXXXXXXXXXXXXXXXXXXXXXXEDGPSLFGGEPKLY 2631
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BLAST of mRNA_Ecto-sp13_S_contig15063.3823.1 vs. uniprot
Match: A0A6H5K3W3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W3_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 2.650e-42
Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 0 
Query:    1 RDGGXXXXXXXXXXHFFGPGSTGEVDAQGEGVADAGSSPRAGGILSPRALENLTPRSRARRRASASVKLRRGSVGPAAGQHKTASIGGLGGGNAAIGSLG 100
            RDG XXXXXXXXXXHFFGPGS GEVDAQGEGVADAGSSPRAGGILSPRALENLTPR RARRRASASVKLRRGSVGPAAGQ KTASIGGLGGGNAAIGSLG
Sbjct:  120 RDGXXXXXXXXXXXHFFGPGSRGEVDAQGEGVADAGSSPRAGGILSPRALENLTPRCRARRRASASVKLRRGSVGPAAGQQKTASIGGLGGGNAAIGSLG 219
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig15063.3823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRY5_ECTSI1.070e-4281.45N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5K3W3_9PHAE2.650e-4296.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig15063contigEcto-sp13_S_contig15063:1962..2977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig15063.3823.1mRNA_Ecto-sp13_S_contig15063.3823.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig15063 1318..2977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig15063.3823.1 ID=prot_Ecto-sp13_S_contig15063.3823.1|Name=mRNA_Ecto-sp13_S_contig15063.3823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
RDGGGGGGGGGGGGHFFGPGSTGEVDAQGEGVADAGSSPRAGGILSPRAL
ENLTPRSRARRRASASVKLRRGSVGPAAGQHKTASIGGLGGGNAAIGSLG
GGGAGAGAGADHEETGTKKEEEAGPSLFGGEPKLY*
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